Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_G15
         (1076 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49967-1|CAA90247.1|  161|Caenorhabditis elegans Hypothetical pr...    71   2e-12
Z27079-13|CAA81597.2|  195|Caenorhabditis elegans Hypothetical p...    68   1e-11

>Z49967-1|CAA90247.1|  161|Caenorhabditis elegans Hypothetical
           protein F54C9.1 protein.
          Length = 161

 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 42/79 (53%), Positives = 46/79 (58%)
 Frame = +2

Query: 230 KNGFVYAEGSLHVKIVEMYTSXIGKHGHAXVHLVGIDIXNGKKYEDICPSXXLMDVXHVQ 409
           KN  V  +G    KIVEM TS  GKHGHA VH+V IDI   KK EDICPS   MDV  V+
Sbjct: 31  KNEHVMIKGR-PCKIVEMSTSKTGKHGHAKVHMVAIDIFTSKKLEDICPSTHNMDVPVVK 89

Query: 410 XRXLPX*PDISDDGYLSLL 466
            R         DDGY SL+
Sbjct: 90  RREYLL--MAIDDGYCSLM 106



 Score = 37.1 bits (82), Expect = 0.022
 Identities = 15/20 (75%), Positives = 16/20 (80%)
 Frame = +1

Query: 166 HLETGDSGASATFPMQCXAL 225
           H  TGDSGA+ATFP QC AL
Sbjct: 10  HFHTGDSGAAATFPKQCSAL 29


>Z27079-13|CAA81597.2|  195|Caenorhabditis elegans Hypothetical
           protein T05G5.10 protein.
          Length = 195

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 42/97 (43%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
 Frame = +2

Query: 131 KTQQXVTSEXHDTWRPETP--GPQPPSPCNVRPWXKNGFVYAEGSLHVKIVEMYTSXIGK 304
           KT + ++ + HD  + ++   G     P       KN  V   G    KIVEM TS  GK
Sbjct: 30  KTIESMSEDHHDEEQFDSAESGAAATFPKQCSALRKNEHVMIRGR-PCKIVEMSTSKTGK 88

Query: 305 HGHAXVHLVGIDIXNGKKYEDICPSXXLMDVXHVQXR 415
           HGHA VH+V IDI   KK EDICPS   MDV  V+ R
Sbjct: 89  HGHAKVHMVAIDIFTTKKLEDICPSTHNMDVPVVKRR 125


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,349,956
Number of Sequences: 27780
Number of extensions: 222047
Number of successful extensions: 425
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 424
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2887577688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)