Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_G07
(1018 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein. 65 9e-11
D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein. 65 9e-11
D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein. 65 9e-11
D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein. 65 9e-11
AL132877-6|CAE54913.1| 151|Caenorhabditis elegans Hypothetical ... 65 9e-11
AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical ... 65 9e-11
AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical ... 65 9e-11
Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical pr... 35 0.081
Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical pr... 35 0.081
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 35 0.081
D38542-1|BAA07545.1| 256|Caenorhabditis elegans CeTMIII protein. 33 0.43
D38539-3|BAA07542.1| 256|Caenorhabditis elegans CeTMIII protein. 33 0.43
AL132877-5|CAD45604.1| 256|Caenorhabditis elegans Hypothetical ... 33 0.43
AL132877-3|CAC70115.1| 256|Caenorhabditis elegans Hypothetical ... 33 0.43
AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical ... 33 0.43
AF298180-1|AAG10302.1| 256|Caenorhabditis elegans tropomyosin i... 33 0.43
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 30 3.0
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 30 3.0
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 30 3.0
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 30 3.0
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 30 3.0
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 30 3.0
Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical pr... 29 4.0
AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical ... 29 4.0
Z81049-1|CAB61001.2| 503|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z75530-4|CAA99794.2| 357|Caenorhabditis elegans Hypothetical pr... 29 5.3
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 29 5.3
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 29 5.3
L29052-1|AAA27982.2| 503|Caenorhabditis elegans cell death prot... 29 5.3
AF210702-1|AAG42045.1| 503|Caenorhabditis elegans caspase CED-3... 29 5.3
Z79695-4|CAB01969.3| 374|Caenorhabditis elegans Hypothetical pr... 29 7.0
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 29 7.0
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 29 7.0
AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical ... 29 7.0
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 28 9.3
U97006-5|AAC47967.1| 222|Caenorhabditis elegans Hypothetical pr... 28 9.3
U80446-1|AAB37802.2| 1198|Caenorhabditis elegans Spindle defecti... 28 9.3
U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical pr... 28 9.3
U41034-2|AAA82379.1| 915|Caenorhabditis elegans Hypothetical pr... 28 9.3
AL032634-1|CAC35856.2| 1195|Caenorhabditis elegans Hypothetical ... 28 9.3
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 28 9.3
>D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 64.9 bits (151), Expect = 9e-11
Identities = 31/59 (52%), Positives = 40/59 (67%)
Frame = +3
Query: 240 MDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKXIQTIEXELDQ 416
MDAIKKKMQAMK+EKDNALDRA E++ + + E+ EEE R QK + +LD+
Sbjct: 1 MDAIKKKMQAMKIEKDNALDRADAAEEKVRQITEKLERVEEELRDTQKKMTQTGDDLDK 59
Score = 32.7 bits (71), Expect = 0.43
Identities = 12/60 (20%), Positives = 35/60 (58%)
Frame = +3
Query: 237 KMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKXIQTIEXELDQ 416
++ + ++++++ ++ AL R E+Q + + R ++AE A ++ +Q ++ E+D+
Sbjct: 196 ELRVVGNNLKSLEVSEEKALQREDSYEEQIRTVSSRLKEAETRAEFAERSVQKLQKEVDR 255
>D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 64.9 bits (151), Expect = 9e-11
Identities = 31/59 (52%), Positives = 40/59 (67%)
Frame = +3
Query: 240 MDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKXIQTIEXELDQ 416
MDAIKKKMQAMK+EKDNALDRA E++ + + E+ EEE R QK + +LD+
Sbjct: 1 MDAIKKKMQAMKIEKDNALDRADAAEEKVRQITEKLERVEEELRDTQKKMTQTGDDLDK 59
Score = 32.7 bits (71), Expect = 0.43
Identities = 12/60 (20%), Positives = 35/60 (58%)
Frame = +3
Query: 237 KMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKXIQTIEXELDQ 416
++ + ++++++ ++ AL R E+Q + + R ++AE A ++ +Q ++ E+D+
Sbjct: 196 ELRVVGNNLKSLEVSEEKALQREDSYEEQIRTVSSRLKEAETRAEFAERSVQKLQKEVDR 255
>D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 64.9 bits (151), Expect = 9e-11
Identities = 31/59 (52%), Positives = 40/59 (67%)
Frame = +3
Query: 240 MDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKXIQTIEXELDQ 416
MDAIKKKMQAMK+EKDNALDRA E++ + + E+ EEE R QK + +LD+
Sbjct: 1 MDAIKKKMQAMKIEKDNALDRADAAEEKVRQITEKLERVEEELRDTQKKMTQTGDDLDK 59
Score = 32.7 bits (71), Expect = 0.43
Identities = 12/60 (20%), Positives = 35/60 (58%)
Frame = +3
Query: 237 KMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKXIQTIEXELDQ 416
++ + ++++++ ++ AL R E+Q + + R ++AE A ++ +Q ++ E+D+
Sbjct: 196 ELRVVGNNLKSLEVSEEKALQREDSYEEQIRTVSSRLKEAETRAEFAERSVQKLQKEVDR 255
>D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 64.9 bits (151), Expect = 9e-11
Identities = 31/59 (52%), Positives = 40/59 (67%)
Frame = +3
Query: 240 MDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKXIQTIEXELDQ 416
MDAIKKKMQAMK+EKDNALDRA E++ + + E+ EEE R QK + +LD+
Sbjct: 1 MDAIKKKMQAMKIEKDNALDRADAAEEKVRQITEKLERVEEELRDTQKKMTQTGDDLDK 59
Score = 32.7 bits (71), Expect = 0.43
Identities = 12/60 (20%), Positives = 35/60 (58%)
Frame = +3
Query: 237 KMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKXIQTIEXELDQ 416
++ + ++++++ ++ AL R E+Q + + R ++AE A ++ +Q ++ E+D+
Sbjct: 196 ELRVVGNNLKSLEVSEEKALQREDSYEEQIRTVSSRLKEAETRAEFAERSVQKLQKEVDR 255
>AL132877-6|CAE54913.1| 151|Caenorhabditis elegans Hypothetical
protein Y105E8B.1f protein.
Length = 151
Score = 64.9 bits (151), Expect = 9e-11
Identities = 31/59 (52%), Positives = 40/59 (67%)
Frame = +3
Query: 240 MDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKXIQTIEXELDQ 416
MDAIKKKMQAMK+EKDNALDRA E++ + + E+ EEE R QK + +LD+
Sbjct: 1 MDAIKKKMQAMKIEKDNALDRADAAEEKVRQITEKLERVEEELRDTQKKMTQTGDDLDK 59
>AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1d protein.
Length = 284
Score = 64.9 bits (151), Expect = 9e-11
Identities = 31/59 (52%), Positives = 40/59 (67%)
Frame = +3
Query: 240 MDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKXIQTIEXELDQ 416
MDAIKKKMQAMK+EKDNALDRA E++ + + E+ EEE R QK + +LD+
Sbjct: 1 MDAIKKKMQAMKIEKDNALDRADAAEEKVRQITEKLERVEEELRDTQKKMTQTGDDLDK 59
Score = 32.7 bits (71), Expect = 0.43
Identities = 12/60 (20%), Positives = 35/60 (58%)
Frame = +3
Query: 237 KMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKXIQTIEXELDQ 416
++ + ++++++ ++ AL R E+Q + + R ++AE A ++ +Q ++ E+D+
Sbjct: 196 ELRVVGNNLKSLEVSEEKALQREDSYEEQIRTVSSRLKEAETRAEFAERSVQKLQKEVDR 255
>AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1a protein.
Length = 284
Score = 64.9 bits (151), Expect = 9e-11
Identities = 31/59 (52%), Positives = 40/59 (67%)
Frame = +3
Query: 240 MDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKXIQTIEXELDQ 416
MDAIKKKMQAMK+EKDNALDRA E++ + + E+ EEE R QK + +LD+
Sbjct: 1 MDAIKKKMQAMKIEKDNALDRADAAEEKVRQITEKLERVEEELRDTQKKMTQTGDDLDK 59
Score = 32.7 bits (71), Expect = 0.43
Identities = 12/60 (20%), Positives = 35/60 (58%)
Frame = +3
Query: 237 KMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKXIQTIEXELDQ 416
++ + ++++++ ++ AL R E+Q + + R ++AE A ++ +Q ++ E+D+
Sbjct: 196 ELRVVGNNLKSLEVSEEKALQREDSYEEQIRTVSSRLKEAETRAEFAERSVQKLQKEVDR 255
>Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 35.1 bits (77), Expect = 0.081
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +3
Query: 255 KKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKXIQTIEXELD 413
K++ K++ DN QQ ++A R E AE E QLQ + ++ ELD
Sbjct: 216 KEVHDQKVQLDNLQHVKYTLAQQLEEARRRLEDAERERSQLQSQLHQVQLELD 268
>Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 35.1 bits (77), Expect = 0.081
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +3
Query: 255 KKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKXIQTIEXELD 413
K++ K++ DN QQ ++A R E AE E QLQ + ++ ELD
Sbjct: 216 KEVHDQKVQLDNLQHVKYTLAQQLEEARRRLEDAERERSQLQSQLHQVQLELD 268
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin
protein.
Length = 882
Score = 35.1 bits (77), Expect = 0.081
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +3
Query: 255 KKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKXIQTIEXELD 413
K++ K++ DN QQ ++A R E AE E QLQ + ++ ELD
Sbjct: 232 KEVHDQKVQLDNLQHVKYTLAQQLEEARRRLEDAERERSQLQSQLHQVQLELD 284
>D38542-1|BAA07545.1| 256|Caenorhabditis elegans CeTMIII protein.
Length = 256
Score = 32.7 bits (71), Expect = 0.43
Identities = 12/60 (20%), Positives = 35/60 (58%)
Frame = +3
Query: 237 KMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKXIQTIEXELDQ 416
++ + ++++++ ++ AL R E+Q + + R ++AE A ++ +Q ++ E+D+
Sbjct: 168 ELRVVGNNLKSLEVSEEKALQREDSYEEQIRTVSSRLKEAETRAEFAERSVQKLQKEVDR 227
>D38539-3|BAA07542.1| 256|Caenorhabditis elegans CeTMIII protein.
Length = 256
Score = 32.7 bits (71), Expect = 0.43
Identities = 12/60 (20%), Positives = 35/60 (58%)
Frame = +3
Query: 237 KMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKXIQTIEXELDQ 416
++ + ++++++ ++ AL R E+Q + + R ++AE A ++ +Q ++ E+D+
Sbjct: 168 ELRVVGNNLKSLEVSEEKALQREDSYEEQIRTVSSRLKEAETRAEFAERSVQKLQKEVDR 227
>AL132877-5|CAD45604.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8B.1e protein.
Length = 256
Score = 32.7 bits (71), Expect = 0.43
Identities = 12/60 (20%), Positives = 35/60 (58%)
Frame = +3
Query: 237 KMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKXIQTIEXELDQ 416
++ + ++++++ ++ AL R E+Q + + R ++AE A ++ +Q ++ E+D+
Sbjct: 168 ELRVVGNNLKSLEVSEEKALQREDSYEEQIRTVSSRLKEAETRAEFAERSVQKLQKEVDR 227
>AL132877-3|CAC70115.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8B.1c protein.
Length = 256
Score = 32.7 bits (71), Expect = 0.43
Identities = 12/60 (20%), Positives = 35/60 (58%)
Frame = +3
Query: 237 KMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKXIQTIEXELDQ 416
++ + ++++++ ++ AL R E+Q + + R ++AE A ++ +Q ++ E+D+
Sbjct: 168 ELRVVGNNLKSLEVSEEKALQREDSYEEQIRTVSSRLKEAETRAEFAERSVQKLQKEVDR 227
>AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical
protein Y105E8B.1b protein.
Length = 193
Score = 32.7 bits (71), Expect = 0.43
Identities = 12/60 (20%), Positives = 35/60 (58%)
Frame = +3
Query: 237 KMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKXIQTIEXELDQ 416
++ + ++++++ ++ AL R E+Q + + R ++AE A ++ +Q ++ E+D+
Sbjct: 105 ELRVVGNNLKSLEVSEEKALQREDSYEEQIRTVSSRLKEAETRAEFAERSVQKLQKEVDR 164
>AF298180-1|AAG10302.1| 256|Caenorhabditis elegans tropomyosin
isoform IV protein.
Length = 256
Score = 32.7 bits (71), Expect = 0.43
Identities = 12/60 (20%), Positives = 35/60 (58%)
Frame = +3
Query: 237 KMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKXIQTIEXELDQ 416
++ + ++++++ ++ AL R E+Q + + R ++AE A ++ +Q ++ E+D+
Sbjct: 168 ELRVVGNNLKSLEVSEEKALQREDSYEEQIRTVSSRLKEAETRAEFAERSVQKLQKEVDR 227
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 29.9 bits (64), Expect = 3.0
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +3
Query: 264 QAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKXIQTIEXELDQT 419
+A + + A AA QA +AN + R+L+ IQ I +LD+T
Sbjct: 1702 EAAERARKQAEYEAADARDQANEANAQVSSLTSAKRKLEGEIQAIHADLDET 1753
Score = 29.5 bits (63), Expect = 4.0
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +3
Query: 237 KMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEAR-QLQKXIQTIEXELD 413
+M I ++++ K E +ALD A + + LRA+ + R +++K IQ E E +
Sbjct: 1534 EMQKIIRRLEIEKEELQHALDEAEAALEAEESKVLRAQVEVSQIRSEIEKRIQEKEEEFE 1593
Query: 414 QT 419
T
Sbjct: 1594 NT 1595
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 29.9 bits (64), Expect = 3.0
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +3
Query: 264 QAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKXIQTIEXELDQT 419
+A + + A AA QA +AN + R+L+ IQ I +LD+T
Sbjct: 1702 EAAERARKQAEYEAADARDQANEANAQVSSLTSAKRKLEGEIQAIHADLDET 1753
Score = 29.5 bits (63), Expect = 4.0
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +3
Query: 237 KMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEAR-QLQKXIQTIEXELD 413
+M I ++++ K E +ALD A + + LRA+ + R +++K IQ E E +
Sbjct: 1534 EMQKIIRRLEIEKEELQHALDEAEAALEAEESKVLRAQVEVSQIRSEIEKRIQEKEEEFE 1593
Query: 414 QT 419
T
Sbjct: 1594 NT 1595
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 29.9 bits (64), Expect = 3.0
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +3
Query: 264 QAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKXIQTIEXELDQT 419
+A + + A AA QA +AN + R+L+ IQ I +LD+T
Sbjct: 1705 EAAERARKQAEYEAADARDQANEANAQVSSLTSAKRKLEGEIQAIHADLDET 1756
Score = 29.5 bits (63), Expect = 4.0
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +3
Query: 237 KMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEAR-QLQKXIQTIEXELD 413
+M I ++++ K E +ALD A + + LRA+ + R +++K IQ E E +
Sbjct: 1537 EMQKIIRRLEIEKEELQHALDEAEAALEAEESKVLRAQVEVSQIRSEIEKRIQEKEEEFE 1596
Query: 414 QT 419
T
Sbjct: 1597 NT 1598
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 29.9 bits (64), Expect = 3.0
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +3
Query: 225 NKTTKMDAIKK-KMQAMKLEKDNALDRAAMCEQQAK-DANLRAEKAEEE 365
++ K++A KK + +KLE+ +A E+QAK DA +A+ AE++
Sbjct: 9442 DEQNKLEATKKLAAEKLKLEEQSAAKSKQAAEEQAKLDAQTKAKAAEKQ 9490
Score = 28.3 bits (60), Expect = 9.3
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 225 NKTTKMDAIKKKM-QAMKLEKDNALDRAAMCEQQAK-DANLRAEKAEEEARQLQKXIQTI 398
++ K++A KK + +KLE+++A E+QAK DA + + AE++ + T
Sbjct: 9692 DEKNKLEANKKSAAEKLKLEEESAAKSKQTVEEQAKLDAQTKEKTAEKQTGLEKDDKSTK 9751
Query: 399 EXELDQT 419
+ E +T
Sbjct: 9752 DSESKET 9758
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.9 bits (64), Expect = 3.0
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +3
Query: 225 NKTTKMDAIKK-KMQAMKLEKDNALDRAAMCEQQAK-DANLRAEKAEEE 365
++ K++A KK + +KLE+ +A E+QAK DA +A+ AE++
Sbjct: 9462 DEQNKLEATKKLAAEKLKLEEQSAAKSKQAAEEQAKLDAQTKAKAAEKQ 9510
Score = 28.7 bits (61), Expect = 7.0
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Frame = +3
Query: 225 NKTTKMDAIKKKMQA-MKLEKDNALDRAAMCEQQAK-DANLRAEKAEEEARQLQKXIQ-T 395
++ K++A KK +K+E+++A E+QAK DA +A+ AE++ +L+K + T
Sbjct: 13345 DEKNKLEANKKSAAGKLKIEEESAAKSKQTVEEQAKLDAQTKAKTAEKQ-TKLEKDEKST 13403
Query: 396 IEXELDQT 419
E E +T
Sbjct: 13404 KESESKET 13411
Score = 28.3 bits (60), Expect = 9.3
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 225 NKTTKMDAIKKKM-QAMKLEKDNALDRAAMCEQQAK-DANLRAEKAEEEARQLQKXIQTI 398
++ K++A KK + +KLE+++A E+QAK DA + + AE++ + T
Sbjct: 9712 DEKNKLEANKKSAAEKLKLEEESAAKSKQTVEEQAKLDAQTKEKTAEKQTGLEKDDKSTK 9771
Query: 399 EXELDQT 419
+ E +T
Sbjct: 9772 DSESKET 9778
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.9 bits (64), Expect = 3.0
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +3
Query: 225 NKTTKMDAIKK-KMQAMKLEKDNALDRAAMCEQQAK-DANLRAEKAEEE 365
++ K++A KK + +KLE+ +A E+QAK DA +A+ AE++
Sbjct: 9462 DEQNKLEATKKLAAEKLKLEEQSAAKSKQAAEEQAKLDAQTKAKAAEKQ 9510
Score = 28.7 bits (61), Expect = 7.0
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Frame = +3
Query: 225 NKTTKMDAIKKKMQA-MKLEKDNALDRAAMCEQQAK-DANLRAEKAEEEARQLQKXIQ-T 395
++ K++A KK +K+E+++A E+QAK DA +A+ AE++ +L+K + T
Sbjct: 13345 DEKNKLEANKKSAAGKLKIEEESAAKSKQTVEEQAKLDAQTKAKTAEKQ-TKLEKDEKST 13403
Query: 396 IEXELDQT 419
E E +T
Sbjct: 13404 KESESKET 13411
Score = 28.3 bits (60), Expect = 9.3
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 225 NKTTKMDAIKKKM-QAMKLEKDNALDRAAMCEQQAK-DANLRAEKAEEEARQLQKXIQTI 398
++ K++A KK + +KLE+++A E+QAK DA + + AE++ + T
Sbjct: 9712 DEKNKLEANKKSAAEKLKLEEESAAKSKQTVEEQAKLDAQTKEKTAEKQTGLEKDDKSTK 9771
Query: 399 EXELDQT 419
+ E +T
Sbjct: 9772 DSESKET 9778
>Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical protein
F48F5.1 protein.
Length = 1291
Score = 29.5 bits (63), Expect = 4.0
Identities = 18/69 (26%), Positives = 34/69 (49%)
Frame = +3
Query: 222 KNKTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKXIQTIE 401
K K K+ A ++K +A K+ + D E+ A LRA++ + EAR++ + + E
Sbjct: 872 KEKEAKLRADQEKSEARKVAEKKK-DEQNQKEKDKLQAKLRADQEKSEARKIAEKKKKEE 930
Query: 402 XELDQTTGV 428
E + +
Sbjct: 931 DEAQKVKNI 939
>AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical
protein T06D10.2 protein.
Length = 479
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/54 (24%), Positives = 32/54 (59%)
Frame = +3
Query: 222 KNKTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQK 383
+ K + + KKK + K++KD ++ E++ K+A R ++ ++EA++ ++
Sbjct: 151 EEKRKEAEEKKKKDEEEKMKKDEERNKRKKEEEEKKEAKRREDEEKKEAKRKEE 204
>Z81049-1|CAB61001.2| 503|Caenorhabditis elegans Hypothetical
protein C48D1.2 protein.
Length = 503
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -1
Query: 133 LXKKPPHYFWNSCRGXRRPSGSPAIN*XKGXXS-XXKGW 20
L KP F +CRG RR +G P ++ G + +GW
Sbjct: 346 LANKPKIVFVQACRGERRDNGFPVLDSVDGVPAFLRRGW 384
>Z75530-4|CAA99794.2| 357|Caenorhabditis elegans Hypothetical
protein C47E8.6 protein.
Length = 357
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/60 (23%), Positives = 30/60 (50%)
Frame = +3
Query: 237 KMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKXIQTIEXELDQ 416
K+ ++KK+ A+++ KD DRA + + A++E ++Q+ + E L +
Sbjct: 65 KIAEVEKKLNAIQITKDRLKDRADKLSGELTKTRVELNAAQQERGRIQQFWRIAENGLGE 124
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 29.1 bits (62), Expect = 5.3
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3
Query: 315 EQQAKDANLRAEKAEEEARQLQKXIQTIEXELDQTTGV 428
EQQ K R K EE R+ ++ Q E E +TTGV
Sbjct: 1006 EQQKKAKRQRNCKTREENRERKRLAQLEELESSETTGV 1043
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 29.1 bits (62), Expect = 5.3
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3
Query: 315 EQQAKDANLRAEKAEEEARQLQKXIQTIEXELDQTTGV 428
EQQ K R K EE R+ ++ Q E E +TTGV
Sbjct: 1006 EQQKKAKRQRNCKTREENRERKRLAQLEELESSETTGV 1043
>L29052-1|AAA27982.2| 503|Caenorhabditis elegans cell death protein
protein.
Length = 503
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -1
Query: 133 LXKKPPHYFWNSCRGXRRPSGSPAIN*XKGXXS-XXKGW 20
L KP F +CRG RR +G P ++ G + +GW
Sbjct: 346 LANKPKIVFVQACRGERRDNGFPVLDSVDGVPAFLRRGW 384
>AF210702-1|AAG42045.1| 503|Caenorhabditis elegans caspase CED-3
protein.
Length = 503
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -1
Query: 133 LXKKPPHYFWNSCRGXRRPSGSPAIN*XKGXXS-XXKGW 20
L KP F +CRG RR +G P ++ G + +GW
Sbjct: 346 LANKPKIVFVQACRGERRDNGFPVLDSVDGVPAFLRRGW 384
>Z79695-4|CAB01969.3| 374|Caenorhabditis elegans Hypothetical
protein F27D4.4a protein.
Length = 374
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 222 KNKTTKMDAIKKKMQAMKLEKDNALDRA 305
+N T+MD ++++ A K EKD LD A
Sbjct: 48 RNNNTRMDLVRQQEAAKKKEKDELLDIA 75
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 28.7 bits (61), Expect = 7.0
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 237 KMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEAR-QLQKXIQTIEXELD 413
++ I +K++ K E ALD A + + LRA+ + R +++K IQ E E +
Sbjct: 1538 ELQKIVRKLEVEKEELQKALDEAEAALEAEEAKVLRAQIEVSQIRSEIEKRIQEKEEEFE 1597
Query: 414 QT 419
T
Sbjct: 1598 NT 1599
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 28.7 bits (61), Expect = 7.0
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 237 KMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEAR-QLQKXIQTIEXELD 413
++ I +K++ K E ALD A + + LRA+ + R +++K IQ E E +
Sbjct: 1538 ELQKIVRKLEVEKEELQKALDEAEAALEAEEAKVLRAQIEVSQIRSEIEKRIQEKEEEFE 1597
Query: 414 QT 419
T
Sbjct: 1598 NT 1599
>AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical
protein K09F6.9 protein.
Length = 609
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/62 (24%), Positives = 32/62 (51%)
Frame = +3
Query: 222 KNKTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKXIQTIE 401
K K + + +KK+ + +KD + + +A+ L EK E+E +Q ++ ++ +E
Sbjct: 247 KEKREQEEKMKKEDRERATQKDRSDHIERHRQAEARAEALEKEKREQEEKQKKENLERVE 306
Query: 402 XE 407
E
Sbjct: 307 KE 308
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/61 (22%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +3
Query: 222 KNKTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKA-EEEARQLQKXIQTI 398
+ +T ++ ++ ++ M++EK+ ++ + QQA ++ AE+A E QL+ ++ +
Sbjct: 504 EQQTAQIQNLQTQIYQMEVEKEEKVELVKVQLQQAAQSSSSAEEALRAEIEQLEAKLKAV 563
Query: 399 E 401
E
Sbjct: 564 E 564
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/61 (22%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +3
Query: 222 KNKTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKA-EEEARQLQKXIQTI 398
+ +T ++ ++ ++ +++EK+ L+ + QQA ++ E+A E +L+ +Q I
Sbjct: 647 EQQTAQIQELQAQLHQLEVEKEEKLEMVKVQLQQAAQSSSSVEQALRAEIEKLEAKLQEI 706
Query: 399 E 401
E
Sbjct: 707 E 707
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/61 (22%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +3
Query: 222 KNKTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKA-EEEARQLQKXIQTI 398
+ +T ++ ++ ++ M++EK+ ++ + QQA ++ AE+A E QL+ ++ +
Sbjct: 504 EQQTAQIQNLQTQIYQMEVEKEEKVELVKVQLQQAAQSSSSAEEALRAEIEQLEAKLKAV 563
Query: 399 E 401
E
Sbjct: 564 E 564
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/61 (22%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +3
Query: 222 KNKTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKA-EEEARQLQKXIQTI 398
+ +T ++ ++ ++ +++EK+ L+ + QQA ++ E+A E +L+ +Q I
Sbjct: 647 EQQTAQIQELQAQLHQLEVEKEEKLEMVKVQLQQAAQSSSSVEQALRAEIEKLEAKLQEI 706
Query: 399 E 401
E
Sbjct: 707 E 707
>U97006-5|AAC47967.1| 222|Caenorhabditis elegans Hypothetical
protein C13F10.7 protein.
Length = 222
Score = 28.3 bits (60), Expect = 9.3
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 222 KNKTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQK 383
K K K A K+K +A KLEK ++ D++ ++ EEE R+ +K
Sbjct: 131 KEKKLKKKAKKEKKKAKKLEKKERKKERKEKRRRRDDSDDSSDSDEEEDRKRKK 184
>U80446-1|AAB37802.2| 1198|Caenorhabditis elegans Spindle defective
protein 5 protein.
Length = 1198
Score = 28.3 bits (60), Expect = 9.3
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +3
Query: 249 IKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKXIQTIEXELDQT 419
+ K+ ++ E + AL R EQ+ + ++AE A EEARQL ++ E EL +T
Sbjct: 780 VNSKLGEVRCELNEALARVDG-EQETR---VKAENALEEARQLISSLKHEENELKKT 832
>U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical
protein T04G9.1 protein.
Length = 1610
Score = 28.3 bits (60), Expect = 9.3
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +3
Query: 222 KNKTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKXIQT 395
K+++ + A+ K MQ M+ K D A + + K EKAEEE + L + + T
Sbjct: 567 KDRSQEPTAVPKHMQRMRKPKTLVHDGALIPVAETKLNPENDEKAEEERKALLQALPT 624
>U41034-2|AAA82379.1| 915|Caenorhabditis elegans Hypothetical
protein M02D8.3 protein.
Length = 915
Score = 28.3 bits (60), Expect = 9.3
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 10/74 (13%)
Frame = +3
Query: 222 KNKTTKMDAIKKKMQAMKLEKDNALDRAAMCE-------QQAKDANLRAEKAE---EEAR 371
K K TKM+ K+K + K E++N E ++A+ A +R EK E+ R
Sbjct: 380 KEKKTKMEMEKEKEKTRKKEENNKRKEKKEAEKLLERSYKRAEQARVRYEKTGIRLEKRR 439
Query: 372 QLQKXIQTIEXELD 413
QL++ + + ELD
Sbjct: 440 QLEEKRRRRQEELD 453
>AL032634-1|CAC35856.2| 1195|Caenorhabditis elegans Hypothetical
protein Y39G8C.1 protein.
Length = 1195
Score = 28.3 bits (60), Expect = 9.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 222 KNKTTKMDAIKKKMQAMKLEKDNALDRAAMCE 317
+NK KM+A++KKM+ L D A C+
Sbjct: 952 QNKVDKMEALRKKMEQKSLRWMGGYDCARQCQ 983
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +3
Query: 243 DAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKXIQTIEXELDQ 416
++I + + +E+ A+DRA CE++ + R E +L + + ELD+
Sbjct: 1329 ESIVESKTEILMERKRAMDRAEACEKETELKQSRMATIESARMELGGELARTQSELDR 1386
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,631,780
Number of Sequences: 27780
Number of extensions: 232249
Number of successful extensions: 915
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2678332928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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