Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_G05
         (888 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0385 + 2915532-2916482                                           31   1.2  
11_06_0610 - 25449085-25453284                                         29   3.7  
12_02_0280 - 16729000-16729678,16729948-16730039,16730072-167307...    29   4.9  
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866...    28   8.6  
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433...    28   8.6  

>11_01_0385 + 2915532-2916482
          Length = 316

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -1

Query: 411 FHPRPSYATPSPPTQKWYPMSPQP 340
           FHP P+ A P P   KW P+ P P
Sbjct: 206 FHPPPTPAWPHPGGNKWPPLPPFP 229


>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 405 PRPSYATPSPPTQKWYPMSPQPKE 334
           P   Y  P PP+  W P SP+ K+
Sbjct: 504 PPAEYGAPPPPSSGWLPKSPERKK 527


>12_02_0280 -
           16729000-16729678,16729948-16730039,16730072-16730772,
           16731033-16731144,16731961-16731970,16732954-16733663
          Length = 767

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = +2

Query: 116 YTSSHPRLIEKDHLSVDFPVCSRDCWGAVPSKDTRPLNKPVP 241
           YT   P+L EK  L+ DF  C + C GA+P   T  L+   P
Sbjct: 652 YTHRFPKL-EKFILACDFLPCLKFCIGAMPQLQTLKLDDRRP 692


>09_06_0277 -
           21983049-21983080,21983250-21984788,21986619-21986655,
           21987612-21987665,21987781-21987893,21988272-21988660,
           21988783-21988903,21989245-21989342,21989963-21990153
          Length = 857

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -1

Query: 423 IPMTFHPRPSYATPSPPTQKWYPMSPQ 343
           +P   +P P   TPSPP    YP  P+
Sbjct: 428 LPPVVYPSPPEVTPSPPEIAPYPSPPE 454


>07_03_0792 -
           21541301-21542143,21542426-21542661,21543177-21543373,
           21543459-21544173,21544250-21544892,21545970-21546139,
           21546442-21546943
          Length = 1101

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
 Frame = -1

Query: 480 LQSPIRQMPMLNLLAGPA*IPMTFHP-RPSYATPSPPTQKWYPMSPQP 340
           L  P  Q PM  L A P   P    P  P  A P PP +   P  P+P
Sbjct: 567 LSPPAPQAPMPPLKASPVPPPEPSPPPAPKAAPPPPPPKSTGPGPPRP 614


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,170,125
Number of Sequences: 37544
Number of extensions: 518254
Number of successful extensions: 1829
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1822
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)