Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_G05
(888 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical pr... 29 3.4
AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-l... 29 3.4
AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-l... 29 3.4
Z72502-16|CAI46573.2| 409|Caenorhabditis elegans Hypothetical p... 29 5.9
Z70782-12|CAI46574.2| 409|Caenorhabditis elegans Hypothetical p... 29 5.9
AC006637-1|AAK85476.2| 342|Caenorhabditis elegans Hypothetical ... 29 5.9
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 28 7.8
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 28 7.8
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 28 7.8
>Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical
protein B0457.1b protein.
Length = 1012
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 256 MNNDVGHWLVQRSCVF*RNSAP 191
M DVGHW+ +R C NS+P
Sbjct: 797 MRKDVGHWMYRRGCGGSSNSSP 818
>Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical
protein B0457.1a protein.
Length = 1014
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 256 MNNDVGHWLVQRSCVF*RNSAP 191
M DVGHW+ +R C NS+P
Sbjct: 799 MRKDVGHWMYRRGCGGSSNSSP 820
>AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-like
protein LAT-1B protein.
Length = 1012
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 256 MNNDVGHWLVQRSCVF*RNSAP 191
M DVGHW+ +R C NS+P
Sbjct: 797 MRKDVGHWMYRRGCGGSSNSSP 818
>AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-like
protein LAT-1A protein.
Length = 1014
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 256 MNNDVGHWLVQRSCVF*RNSAP 191
M DVGHW+ +R C NS+P
Sbjct: 799 MRKDVGHWMYRRGCGGSSNSSP 820
>Z72502-16|CAI46573.2| 409|Caenorhabditis elegans Hypothetical
protein C08B6.14 protein.
Length = 409
Score = 28.7 bits (61), Expect = 5.9
Identities = 25/73 (34%), Positives = 29/73 (39%)
Frame = +2
Query: 257 HTAIPTVCNTTTQCMRDMRSMQKYHNSLGWGDIGYHFCVGGDGVAYEGRGWNVIGIHAGP 436
H I N +TQ + S + +L Y CV GD Y GR I IH G
Sbjct: 58 HVVILKNLNPSTQYYYQIDSRKFNFRTLPTDLTSYKVCVFGDLGVYNGRSTQSI-IHNGI 116
Query: 437 ANKLSIGICLIGD 475
A K I IGD
Sbjct: 117 AGKFGF-IVHIGD 128
>Z70782-12|CAI46574.2| 409|Caenorhabditis elegans Hypothetical
protein C08B6.14 protein.
Length = 409
Score = 28.7 bits (61), Expect = 5.9
Identities = 25/73 (34%), Positives = 29/73 (39%)
Frame = +2
Query: 257 HTAIPTVCNTTTQCMRDMRSMQKYHNSLGWGDIGYHFCVGGDGVAYEGRGWNVIGIHAGP 436
H I N +TQ + S + +L Y CV GD Y GR I IH G
Sbjct: 58 HVVILKNLNPSTQYYYQIDSRKFNFRTLPTDLTSYKVCVFGDLGVYNGRSTQSI-IHNGI 116
Query: 437 ANKLSIGICLIGD 475
A K I IGD
Sbjct: 117 AGKFGF-IVHIGD 128
>AC006637-1|AAK85476.2| 342|Caenorhabditis elegans Hypothetical
protein F41B4.1 protein.
Length = 342
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +1
Query: 214 HKTSEQASALRHYSSHRYSDCMQHHNPMYERYAKHAEIP 330
+ ++ A++ SH S + H P Y++Y +HA P
Sbjct: 174 YSQNQSANSTLTRQSHSQSHTLPHQMPQYQQYHRHATPP 212
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 444 LLAGPA*IPMTFHPRPSYATPSPPTQKWYPMSPQP 340
+LA P TF+P + +T SPPT P +P P
Sbjct: 458 VLAPPTTPGPTFYPVTTVSTMSPPTTVTVPTTPTP 492
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 444 LLAGPA*IPMTFHPRPSYATPSPPTQKWYPMSPQP 340
+LA P TF+P + +T SPPT P +P P
Sbjct: 458 VLAPPTTPGPTFYPVTTVSTMSPPTTVTVPTTPTP 492
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 444 LLAGPA*IPMTFHPRPSYATPSPPTQKWYPMSPQP 340
+LA P TF+P + +T SPPT P +P P
Sbjct: 458 VLAPPTTPGPTFYPVTTVSTMSPPTTVTVPTTPTP 492
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,876,577
Number of Sequences: 27780
Number of extensions: 402735
Number of successful extensions: 1120
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1119
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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