Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_F24
(895 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434 33 0.23
05_01_0499 - 4166891-4166942,4167191-4167510 31 1.2
06_01_0931 + 7192519-7194075 31 1.6
04_04_0726 + 27588225-27588685,27588768-27588895,27590523-27591016 31 1.6
06_01_1009 - 7859357-7859405,7860476-7860660,7860747-7860821,786... 30 2.9
02_05_0667 + 30739612-30739783,30739872-30739957,30740832-307408... 30 2.9
07_03_0970 - 23034521-23034928,23036173-23037081 29 5.0
05_07_0359 - 29539294-29540832,29542366-29542518 29 5.0
03_01_0141 + 1116833-1117082,1117658-1118574,1119417-1119579,111... 29 5.0
11_01_0458 + 3536162-3537794,3537905-3538272 29 6.6
02_04_0470 - 23183925-23184743,23184929-23185153 29 6.6
02_02_0272 - 8452994-8453187,8453850-8454975 29 6.6
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769... 28 8.7
10_08_1048 - 22553676-22554866 28 8.7
07_03_0723 + 20954827-20954905,20954974-20956277 28 8.7
03_03_0204 + 15436660-15437244,15437355-15437632,15438792-154390... 28 8.7
>03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434
Length = 418
Score = 33.5 bits (73), Expect = 0.23
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = -1
Query: 388 GMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMAL 272
G P R+SP L+ PAEAALS RSL S P ++
Sbjct: 138 GEEPPRRVSPAAVVLAVLLPAEAALSFIRSLSSLAPFSI 176
>05_01_0499 - 4166891-4166942,4167191-4167510
Length = 123
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = -1
Query: 478 LIANALALRSWLLLWNKLTLPATPSCSPKPGMRVPVRLSPCPFTLSRASPAEAA 317
LI LALR LL N + PS SP+ + R P P + + ASP+ +A
Sbjct: 5 LIIVPLALRGASLLGNAVAAAVVPSSSPEQQQQQQRRPRPPPGSKNGASPSSSA 58
>06_01_0931 + 7192519-7194075
Length = 518
Score = 30.7 bits (66), Expect = 1.6
Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Frame = -1
Query: 625 LPPAE*SFRLMTSECAALNDAPTFCLNM*STPPPSVLKLGALGMALGEFLIANALALRSW 446
+PP + R CAAL +P S+ PPS A ++ +ALR+
Sbjct: 50 VPPGQTFERACIQACAALAFSPPAVAADLSSLPPS---------ASSPLVLVPNVALRTA 100
Query: 445 LLLW-NKLTLPATPSCSPKPGMRVPVRLSPCP 353
+L W ++L+LP SP V RL P P
Sbjct: 101 ILNWCDRLSLPYPAPLSPDTARDVVRRLMPSP 132
>04_04_0726 + 27588225-27588685,27588768-27588895,27590523-27591016
Length = 360
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +3
Query: 288 ADFNDRHKLSAASAGLALDNVNGHGLSLTGTRIPGFGEQLGVAGKVNL 431
A N+R + S AS +A + + HG+ + G P +G AG ++L
Sbjct: 173 AGHNERRRRSNASEAMARGSAHPHGMPVLGHGFPPYGLPTSSAGALSL 220
>06_01_1009 -
7859357-7859405,7860476-7860660,7860747-7860821,
7860852-7861313,7861411-7861482,7861629-7861775,
7861888-7862043,7862136-7862306,7862505-7862675,
7862763-7862828,7864302-7864387,7864505-7864667
Length = 600
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +3
Query: 501 NAPNFNTLGGGVDYMFKQKVGASLSAAHSDVINRNDYSAGGKLNLFRSPSSSLDFNAGSR 680
N P+ GG D M K L+ +R+ S+ L L + +S F+ G+R
Sbjct: 377 NGPSRRLSLGGADNMSKLSPNGLLARRSPSFHSRSSLSSSSSLVLKHAKGTSKSFDGGTR 436
Query: 681 SLIR 692
SL R
Sbjct: 437 SLDR 440
>02_05_0667 +
30739612-30739783,30739872-30739957,30740832-30740837,
30741521-30741586,30741664-30741834,30742032-30742202,
30742457-30742612,30742705-30742851,30742964-30743035,
30743122-30743652,30743739-30743926,30744781-30744838
Length = 607
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +3
Query: 492 AIPNAPNFNTLGGGVDYMFKQKVGASLSAAHSDVINRNDYSAGGKLNLFRSPSSSLDFNA 671
+I N P+ GG D M K L+ +R+ S L + + +S F+
Sbjct: 378 SIGNGPSRRLSLGGADNMSKISPNGMLARRSPSFNSRSSLSTSSSLVIKHAKGTSRSFDG 437
Query: 672 GSRSLIR 692
G+RSL R
Sbjct: 438 GTRSLDR 444
>07_03_0970 - 23034521-23034928,23036173-23037081
Length = 438
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 736 RRXSHIGLPRRSVKRRIKLL-EPALKSSELDGDR 638
RR + LPR V RR+++L EP E D DR
Sbjct: 112 RRIDELDLPRHEVVRRLRILREPVTLFGEDDADR 145
>05_07_0359 - 29539294-29540832,29542366-29542518
Length = 563
Score = 29.1 bits (62), Expect = 5.0
Identities = 24/85 (28%), Positives = 33/85 (38%)
Frame = -1
Query: 409 PSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLSLPVRGTFRA 230
P KPG P R +P P S +S A AA +L +K + P+R +
Sbjct: 155 PVLEAKPGRGRP-RKNPLPVASSTSSAAAAATALSLRVKRGPGRPRKNAAATPLRLGVKR 213
Query: 229 APEVPSEFTVKLPACLRARVGTCLP 155
P P + P L A+ G P
Sbjct: 214 GPGRPRKNAAATPLRLGAKRGPGRP 238
>03_01_0141 +
1116833-1117082,1117658-1118574,1119417-1119579,
1119668-1120497,1120562-1120570
Length = 722
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -3
Query: 416 CDAELLPEAGNAGPGQAQPV 357
C A LLPE GN G GQ+ V
Sbjct: 486 CSATLLPEEGNTGDGQSPKV 505
>11_01_0458 + 3536162-3537794,3537905-3538272
Length = 666
Score = 28.7 bits (61), Expect = 6.6
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 7/112 (6%)
Frame = +3
Query: 381 RIPGFGEQLGVAGKVNLFHNNNHDLSAKAFAIRNSPSAIPNAPNFNTLGGGVDYMF---K 551
+IP G QL + N+ +NN H + AI + PS I ++N L G + K
Sbjct: 106 QIPSLGNQLQMLQIFNVLYNNLHGVIPN--AIFSLPSLIQVDLSYNNLHGQLPIDIGNAK 163
Query: 552 QKVGASLSA--AHSDVINR-NDYSAGGKLNLFRSP-SSSLDFNAGSRSLIRL 695
Q V LS+ D++N D + + L R+ S S+ + G+ S +R+
Sbjct: 164 QLVSLKLSSNKLSGDILNALGDCESLEVIRLDRNNFSGSIPISLGNISSLRV 215
>02_04_0470 - 23183925-23184743,23184929-23185153
Length = 347
Score = 28.7 bits (61), Expect = 6.6
Identities = 30/93 (32%), Positives = 36/93 (38%), Gaps = 6/93 (6%)
Frame = -1
Query: 409 PSCSPKPGMRVPVRLSPCPFTLSRASPAEAAL-----SLWRSLKSADPMALSTFLSLPVR 245
PS +PGMRV R SP +RA P +L S W P A ST S R
Sbjct: 159 PSLPAQPGMRVAHRWSPAK---ARALPPPPSLRYPSRSSWDGADLDGPTAASTTTSRRRR 215
Query: 244 GTFR-AAPEVPSEFTVKLPACLRARVGTCLPLA 149
R P S + + C RA + L A
Sbjct: 216 RHHRLVPPPAASPLSNRQRHCCRAAIAGALESA 248
>02_02_0272 - 8452994-8453187,8453850-8454975
Length = 439
Score = 28.7 bits (61), Expect = 6.6
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = -1
Query: 373 VRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLSLPVRG 242
+RL P P +L RA+ A + WR L +ADP L F + RG
Sbjct: 20 LRLPPRPSSLPRAA---AVCARWRRLVTADPAFLRRFRAHHRRG 60
>12_01_0831 -
7688342-7688772,7690678-7692610,7693142-7693915,
7694019-7694142,7696084-7696189,7696346-7696532
Length = 1184
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -1
Query: 376 PVRLSPCPFTLSRASPAEAA 317
P+RLSP P ++SR P+ AA
Sbjct: 153 PIRLSPSPRSMSRTRPSSAA 172
>10_08_1048 - 22553676-22554866
Length = 396
Score = 28.3 bits (60), Expect = 8.7
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = -1
Query: 538 STPPPSVLKLGALGMALGEFLIANALALRSWLLLWNKLTLPATPSCSPKPGMRVPVRLSP 359
ST PP +L A E L+ A+R+ + N L P P P + + RL+P
Sbjct: 47 STAPPLLLPAAHQAQAQDEQLLRQLTAIRATVSQLNHLRSSTPPPPPPPPELLLYSRLAP 106
>07_03_0723 + 20954827-20954905,20954974-20956277
Length = 460
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 403 CSPKPGMRVPVR-LSPCPFTLSRASPAEAALSLWR 302
CSP P R+P+R + C +ASP + + WR
Sbjct: 62 CSPAPSARIPLRGFTDCRL---KASPGSGSFTRWR 93
>03_03_0204 +
15436660-15437244,15437355-15437632,15438792-15439068,
15439160-15439405,15440853-15441134
Length = 555
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = -1
Query: 430 KLTLPATPSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKS 290
K + P+ + P P ++P P + +PA A+ WR+ K+
Sbjct: 59 KTSSPSVAAPEKAPVAAAPAPVAPAPAATKQVAPARWAVDSWRTKKA 105
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,042,462
Number of Sequences: 37544
Number of extensions: 454206
Number of successful extensions: 1522
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1521
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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