Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_F24
         (895 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114928-1|AAI14929.1|  562|Homo sapiens TMPRSS13 protein protein.     33   1.4  
AY190317-1|AAO38062.1|  558|Homo sapiens transmembrane protease ...    33   1.4  
AB048796-1|BAB39741.2|  581|Homo sapiens membrane-type mosaic se...    33   1.4  
AK027798-1|BAB55376.1|  491|Homo sapiens protein ( Homo sapiens ...    32   2.4  
D87446-1|BAA13387.1| 1805|Homo sapiens KIAA0257 protein.               30   9.9  

>BC114928-1|AAI14929.1|  562|Homo sapiens TMPRSS13 protein protein.
          Length = 562

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 33/93 (35%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
 Frame = -1

Query: 415 ATPSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLS----LPV 248
           A+P+ +P PG   P R SP   + +RASPA A+LS   S +S+   + S   S      V
Sbjct: 59  ASPAGTP-PGRASPGRASPAQASPARASPALASLSRSSSGRSSSARSASVTTSPTRVYLV 117

Query: 247 RGTFRAAPEVPSEFTVKLPA--CLRARVGTCLP 155
           R T   A  + S      PA    R   GT LP
Sbjct: 118 RATPVGAVPIRSSPARSAPATRATRESPGTSLP 150


>AY190317-1|AAO38062.1|  558|Homo sapiens transmembrane protease
           serine 6 protein.
          Length = 558

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 33/93 (35%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
 Frame = -1

Query: 415 ATPSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLS----LPV 248
           A+P+ +P PG   P R SP   + +RASPA A+LS   S +S+   + S   S      V
Sbjct: 59  ASPAGTP-PGRASPGRASPAQASPARASPALASLSRSSSGRSSSARSASVTTSPTRVYLV 117

Query: 247 RGTFRAAPEVPSEFTVKLPA--CLRARVGTCLP 155
           R T   A  + S      PA    R   GT LP
Sbjct: 118 RATPVGAVPIRSSPARSAPATRATRESPGTSLP 150


>AB048796-1|BAB39741.2|  581|Homo sapiens membrane-type mosaic
           serine protease protein.
          Length = 581

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 33/93 (35%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
 Frame = -1

Query: 415 ATPSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLS----LPV 248
           A+P+ +P PG   P R SP   + +RASPA A+LS   S +S+   + S   S      V
Sbjct: 59  ASPAGTP-PGRASPGRASPAQASPARASPALASLSRSSSGRSSSARSASVTTSPTRVYLV 117

Query: 247 RGTFRAAPEVPSEFTVKLPA--CLRARVGTCLP 155
           R T   A  + S      PA    R   GT LP
Sbjct: 118 RATPVGAVPIRSSPARSAPATRATRESPGTSLP 150


>AK027798-1|BAB55376.1|  491|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14892 fis, clone PLACE1004270, weakly similar to
           TRANSMEMBRANE PROTEASE, SERINE 2 (EC 3.4.21.-). ).
          Length = 491

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 31/92 (33%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
 Frame = -1

Query: 412 TPSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLS----LPVR 245
           TP     PG   P + SP   + +RASPA A+LS   S +S+   + S   S      VR
Sbjct: 64  TPPGRASPGRASPAQASPAQASPARASPALASLSRSSSGRSSSARSASVTTSPTRVYLVR 123

Query: 244 GTFRAAPEVPSEFTVKLPA--CLRARVGTCLP 155
            T   A  + S      PA    R   GT LP
Sbjct: 124 ATPVGAVPIRSSPARSAPATRATRESPGTSLP 155


>D87446-1|BAA13387.1| 1805|Homo sapiens KIAA0257 protein.
          Length = 1805

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 45/189 (23%), Positives = 78/189 (41%), Gaps = 8/189 (4%)
 Frame = +3

Query: 183  RQAGSFTVNSDGTSGAALKVPLTGNDKNVLSAIGSADFNDRHKLSAASAGLALDNVNGHG 362
            R + S  VNS  +S   +K P  G+   +  A      N     +A +AG    +  G+G
Sbjct: 1539 RGSYSSIVNSSSSSDPKIKQP-NGSKHKLTKAASLPGKNGNPTFAAVTAGYD-KSPGGNG 1596

Query: 363  LSLTGTRIPGFGEQLGVAGKVNLFHNNNHDLSAKAFAIRN--SPSAIPNAPNFNTLGGGV 536
             +   +   GF   LG++       ++  D S     + N  SP   P   +F+  G   
Sbjct: 1597 FAKVSSNKTGFSSSLGISHAP--VDSDGSDSSGLWSPVSNPSSPDFTP-LNSFSAFGNSF 1653

Query: 537  DYMFK--QKVGASLSAAHSDVINRNDYSAGGKLNLFRSPSS--SLDFNAGSRSLIRLFTD 704
            +   +   K+G S S   +   + N++++G    L+ SP++  S  + A S S     T 
Sbjct: 1654 NLTGEVFSKLGLSRSCNQASQRSWNEFNSGPSY-LWESPATDPSPSWPASSGSPTHTATS 1712

Query: 705  LRG--SPMW 725
            + G  S +W
Sbjct: 1713 VLGNTSGLW 1721


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,240,711
Number of Sequences: 237096
Number of extensions: 2318006
Number of successful extensions: 12771
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12749
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)