Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_F20
         (896 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165     29   5.0  
05_06_0198 + 26300872-26301519,26302939-26303028,26303118-26303189     29   6.6  

>08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165
          Length = 430

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -1

Query: 722 RXLXGGKRLVSL*SCRVSPPXX*ASIFVMLVQGGGAYGKTPAT 594
           R L  GK L+S  + R  PP   + + V+ + GGG  G  P T
Sbjct: 22  RVLSRGKSLLSPSTPRSPPPSYGSIVTVLSIDGGGVRGIIPGT 64


>05_06_0198 + 26300872-26301519,26302939-26303028,26303118-26303189
          Length = 269

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 17/38 (44%), Positives = 20/38 (52%)
 Frame = +2

Query: 716 APSXRSPVXDPAXLPEYLSAFLPSGKRGPFLIXHAVGS 829
           APS   PV  PA L   L+A L  G+ G  L   AVG+
Sbjct: 48  APSTPPPVWPPASLSRLLAAALRGGRAGGELPDLAVGA 85


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,624,052
Number of Sequences: 37544
Number of extensions: 235267
Number of successful extensions: 446
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 446
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)