Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_F19
         (851 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

K03205-1|AAA60186.1|  198|Homo sapiens PRB1 protein.                   33   1.7  
BC141917-1|AAI41918.1|  198|Homo sapiens PRB1 protein protein.         33   1.7  

>K03205-1|AAA60186.1|  198|Homo sapiens PRB1 protein.
          Length = 198

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 5/72 (6%)
 Frame = +1

Query: 421 PPPPGKXXXX--FGXXSRSP---PXXPXXPXXXXGEXVXXPPKGGXXXXPKXGXXPXKNX 585
           PPPPGK       G  SRSP   P  P  P    G+    PP+GG            +  
Sbjct: 71  PPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPPQGGNKPQGPPPPGKPQGP 130

Query: 586 LTKGPQKAQNPK 621
             +G  K+Q+ +
Sbjct: 131 PAQGGSKSQSAR 142


>BC141917-1|AAI41918.1|  198|Homo sapiens PRB1 protein protein.
          Length = 198

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 5/72 (6%)
 Frame = +1

Query: 421 PPPPGKXXXX--FGXXSRSP---PXXPXXPXXXXGEXVXXPPKGGXXXXPKXGXXPXKNX 585
           PPPPGK       G  SRSP   P  P  P    G+    PP+GG            +  
Sbjct: 71  PPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPPQGGNKPQGPLPPGKPQGP 130

Query: 586 LTKGPQKAQNPK 621
             +G  K+Q+ +
Sbjct: 131 PAQGGSKSQSAR 142


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,038,171
Number of Sequences: 237096
Number of extensions: 703055
Number of successful extensions: 1479
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1440
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10816958492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)