Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_F18
         (908 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0725 - 20442988-20443180,20443268-20443540,20443642-204438...    32   0.55 
06_02_0074 - 11461300-11461681,11461744-11462009                       31   0.96 
07_03_0636 + 20168180-20168462,20168961-20170303,20170401-201706...    30   2.2  
02_05_0908 + 32668706-32669140,32669772-32669957,32670316-326704...    29   6.7  
03_02_0631 + 9969841-9969868,9969965-9970082,9970186-9970828,997...    28   8.9  

>08_02_0725 -
           20442988-20443180,20443268-20443540,20443642-20443853,
           20443935-20444247,20444334-20444441,20444537-20444643,
           20444743-20444781
          Length = 414

 Score = 32.3 bits (70), Expect = 0.55
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -3

Query: 324 TTFTKKSLVALSQSPEDLPSPHFLVPSDKVV 232
           TTF +++  A S +PE+LP P  ++  D+VV
Sbjct: 233 TTFRRRTTAAASPAPEELPLPRKILDHDRVV 263


>06_02_0074 - 11461300-11461681,11461744-11462009
          Length = 215

 Score = 31.5 bits (68), Expect = 0.96
 Identities = 23/67 (34%), Positives = 27/67 (40%)
 Frame = +2

Query: 248 GTRKWGEGRSSGLWERATKDFLVKVVTTGXFFNDDRGKLTGQAYGTRVLGPGGDSTSYGG 427
           G R+ G  R      R   +   KV T G    D RG+  G+A G    G GGD    G 
Sbjct: 121 GWRRRGCRRRCRWGRRTVTEKAYKVATAGDTEGDKRGEEGGEAGGGDADGAGGDGGGKGE 180

Query: 428 RLDWANE 448
              WA E
Sbjct: 181 --GWATE 185


>07_03_0636 +
           20168180-20168462,20168961-20170303,20170401-20170678,
           20170790-20170821,20170908-20171314,20171401-20171847
          Length = 929

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = +3

Query: 150 SFYASWLRREVSDHQPIFKVSLTPSRYSRLCHLGQGNGGREGLRD 284
           SF  S+L +E++  +       +PS Y+R   LG GNGG + + D
Sbjct: 708 SFARSYLVQELNIAETRLVPLNSPSDYARALELGSGNGGVDAIID 752


>02_05_0908 +
           32668706-32669140,32669772-32669957,32670316-32670414,
           32671010-32671147,32672276-32672533,32675009-32675272,
           32675426-32675571,32675762-32675839,32676746-32676875,
           32677040-32677286,32677374-32677423,32677767-32677869,
           32678332-32678354
          Length = 718

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = -1

Query: 749 SIFITIFLDKILFILLGLRGKNAC--LSGTYIAALIMVLAIT 630
           S  + IF+D + F LL ++  N C  L+  +  AL +V ++T
Sbjct: 188 SCLVAIFIDPLFFFLLSVQKDNKCIVLNWHFATALAVVRSVT 229


>03_02_0631 +
           9969841-9969868,9969965-9970082,9970186-9970828,
           9971146-9971935,9972002-9972051,9972618-9972704
          Length = 571

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = -3

Query: 375 ACPVSLPRSSLKNXPVVTTFTKKSLVALSQSPEDLPSP 262
           AC  S+ R SLK  PVV+  +++ L   S SP D  SP
Sbjct: 414 ACRSSIDRLSLKGSPVVSGLSQRQL--SSDSPLDKLSP 449


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,156,261
Number of Sequences: 37544
Number of extensions: 451020
Number of successful extensions: 1241
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1241
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)