Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_F16
         (1083 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1667 + 35211776-35212132,35212640-35212727,35213573-352137...    33   0.39 
03_05_0726 + 27164921-27165205                                         29   8.5  

>04_04_1667 +
           35211776-35212132,35212640-35212727,35213573-35213705,
           35213806-35214616
          Length = 462

 Score = 33.1 bits (72), Expect = 0.39
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = +2

Query: 218 FNXKYQEKXNKPISXCDKTRCIFKQSGWAXXXXIYKKKVSDYLEXXDKDXPDRSEVV 388
           F+ +++ K   P S  D T  + +QS WA       + V   LE  D + P R +VV
Sbjct: 29  FSGRHRGKSIGPSSELDDTPVVAQQSKWAGLPPELLRDVMKRLEEDDSNWPSRKDVV 85


>03_05_0726 + 27164921-27165205
          Length = 94

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -1

Query: 195 REYGVWQFSXXNSRLXWD 142
           R YG W F   NS+L WD
Sbjct: 49  RPYGFWTFDRFNSQLSWD 66


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,373,270
Number of Sequences: 37544
Number of extensions: 237162
Number of successful extensions: 223
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 223
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3234583292
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)