Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_F13
(866 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.087
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.087
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.087
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 34 0.15
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 1.9
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 1.9
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 4.3
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 4.3
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 4.3
Z81059-1|CAB02925.1| 249|Caenorhabditis elegans Hypothetical pr... 26 5.3
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 28 7.5
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 28 7.5
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 28 9.9
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 28 9.9
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 28 9.9
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 28 9.9
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 28 9.9
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.7 bits (76), Expect = 0.087
Identities = 22/64 (34%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
Frame = +3
Query: 678 PXPXGGXPXRTXXIPGVSPPXS-PXXXRPPXSPPKXPXXXPFXPXPXXXNGXTFPXXPPX 854
P P GG P T P PP P P PP P P P P G F PP
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG--FKGGPPP 786
Query: 855 KETP 866
P
Sbjct: 787 PPPP 790
Score = 32.7 bits (71), Expect = 0.35
Identities = 19/57 (33%), Positives = 20/57 (35%)
Frame = +3
Query: 678 PXPXGGXPXRTXXIPGVSPPXSPXXXRPPXSPPKXPXXXPFXPXPXXXNGXTFPXXP 848
P P GG P + G PP P PP PP P P P G P P
Sbjct: 745 PPPPGGLPPISG---GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.7 bits (76), Expect = 0.087
Identities = 22/64 (34%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
Frame = +3
Query: 678 PXPXGGXPXRTXXIPGVSPPXS-PXXXRPPXSPPKXPXXXPFXPXPXXXNGXTFPXXPPX 854
P P GG P T P PP P P PP P P P P G F PP
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG--FKGGPPP 786
Query: 855 KETP 866
P
Sbjct: 787 PPPP 790
Score = 32.7 bits (71), Expect = 0.35
Identities = 19/57 (33%), Positives = 20/57 (35%)
Frame = +3
Query: 678 PXPXGGXPXRTXXIPGVSPPXSPXXXRPPXSPPKXPXXXPFXPXPXXXNGXTFPXXP 848
P P GG P + G PP P PP PP P P P G P P
Sbjct: 745 PPPPGGLPPISG---GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.7 bits (76), Expect = 0.087
Identities = 22/64 (34%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
Frame = +3
Query: 678 PXPXGGXPXRTXXIPGVSPPXS-PXXXRPPXSPPKXPXXXPFXPXPXXXNGXTFPXXPPX 854
P P GG P T P PP P P PP P P P P G F PP
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG--FKGGPPP 369
Query: 855 KETP 866
P
Sbjct: 370 PPPP 373
Score = 32.7 bits (71), Expect = 0.35
Identities = 19/57 (33%), Positives = 20/57 (35%)
Frame = +3
Query: 678 PXPXGGXPXRTXXIPGVSPPXSPXXXRPPXSPPKXPXXXPFXPXPXXXNGXTFPXXP 848
P P GG P + G PP P PP PP P P P G P P
Sbjct: 328 PPPPGGLPPISG---GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 381
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 33.9 bits (74), Expect = 0.15
Identities = 20/64 (31%), Positives = 23/64 (35%)
Frame = +3
Query: 675 TPXPXGGXPXRTXXIPGVSPPXSPXXXRPPXSPPKXPXXXPFXPXPXXXNGXTFPXXPPX 854
TP P + +P SP SP P PP+ P P P T P PP
Sbjct: 521 TPSPEESDDDQELILP--SPEPSPVREPTPPPPPREPTPREPTPEPEPVREPTPPPPPPA 578
Query: 855 KETP 866
K P
Sbjct: 579 KPRP 582
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 33.1 bits (72), Expect = 0.26
Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = +3
Query: 699 PXRTXXIPGVSPPXSPXXXRPPXSPPKXPXXXP-FXPXPXXXNGXTFPXXP 848
P +P PP SP RPP +PP P P P N P P
Sbjct: 140 PPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSP 190
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +3
Query: 720 PGVSPPXSPXXXRPPXSPPKXPXXXPFXPXPXXXNGXTFPXXPPXKETP 866
P V PP PP PP P P P P P PP TP
Sbjct: 261 PPVPPPPPSVTPMPPPMPPT-PGMTPRPPPPPSSGMWPPPPPPPPGRTP 308
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +3
Query: 720 PGVSPPXSPXXXRPPXSPPKXPXXXPFXPXPXXXNGXTFPXXPPXKETP 866
P V PP PP PP P P P P P PP TP
Sbjct: 271 PPVPPPPPSVTPMPPPMPPT-PGMTPRPPPPPSSGMWPPPPPPPPGRTP 318
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/67 (26%), Positives = 21/67 (31%), Gaps = 4/67 (5%)
Frame = +3
Query: 678 PXPXGGXPXRTXXIPGVSP----PXSPXXXRPPXSPPKXPXXXPFXPXPXXXNGXTFPXX 845
P P G P P P P P PP P P P P + P
Sbjct: 241 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 300
Query: 846 PPXKETP 866
PP + +P
Sbjct: 301 PPPRGSP 307
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/67 (26%), Positives = 21/67 (31%), Gaps = 4/67 (5%)
Frame = +3
Query: 678 PXPXGGXPXRTXXIPGVSP----PXSPXXXRPPXSPPKXPXXXPFXPXPXXXNGXTFPXX 845
P P G P P P P P PP P P P P + P
Sbjct: 262 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 321
Query: 846 PPXKETP 866
PP + +P
Sbjct: 322 PPPRGSP 328
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/67 (26%), Positives = 21/67 (31%), Gaps = 4/67 (5%)
Frame = +3
Query: 678 PXPXGGXPXRTXXIPGVSP----PXSPXXXRPPXSPPKXPXXXPFXPXPXXXNGXTFPXX 845
P P G P P P P P PP P P P P + P
Sbjct: 247 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 306
Query: 846 PPXKETP 866
PP + +P
Sbjct: 307 PPPRGSP 313
>Z81059-1|CAB02925.1| 249|Caenorhabditis elegans Hypothetical
protein F11F1.2 protein.
Length = 249
Score = 26.2 bits (55), Expect(2) = 5.3
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -2
Query: 784 GXLGGXQGGRXXXGLXGGETPGXXXVL 704
G LGG GG G+ GGE G ++
Sbjct: 52 GGLGGILGGNGLGGVLGGEDGGLGGII 78
Score = 21.0 bits (42), Expect(2) = 5.3
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -2
Query: 811 GXGXKGXXXGXLGGXQGG 758
G +G G LGG +GG
Sbjct: 27 GRNGQGGLGGILGGGEGG 44
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -3
Query: 486 PGXPXSXPXEPGRXPXTXNXLSPXPGPP 403
PG P S +PGR P T +P PGPP
Sbjct: 163 PGRPGSD-GQPGR-PATGGGAAPRPGPP 188
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = +3
Query: 678 PXPXGGXPXRTXXIPGVSPPXSPXXXRPPXSPPKXPXXXPFXPXP 812
P GG P + G+ PP PP PP P P P
Sbjct: 88 PMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPPRP 132
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/61 (24%), Positives = 17/61 (27%)
Frame = +3
Query: 684 PXGGXPXRTXXIPGVSPPXSPXXXRPPXSPPKXPXXXPFXPXPXXXNGXTFPXXPPXKET 863
P P +P P P P +PP P P P P PP
Sbjct: 83 PLASYPQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYP 142
Query: 864 P 866
P
Sbjct: 143 P 143
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/58 (29%), Positives = 17/58 (29%)
Frame = +3
Query: 678 PXPXGGXPXRTXXIPGVSPPXSPXXXRPPXSPPKXPXXXPFXPXPXXXNGXTFPXXPP 851
P G P I PP P SP K P P P G P PP
Sbjct: 166 PDAAPGEPGPKGPIGPPGPPGQAGAPGEPGSPAKSEPAVPGPPGPPGQAGQQGPPGPP 223
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = +3
Query: 720 PGVSPPXSPXXXRPPXSPPKXPXXXPFXPXPXXXNGXTFPXXPPXKETP 866
PG PP SP P P P P P G P PP + P
Sbjct: 130 PG-KPPQSPCEPLTPPPCPACPPGPPGAPGAPGKPGSEGPPGPPGHDGP 177
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/60 (31%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Frame = +3
Query: 678 PXPXG--GXPXRTXXIPGVSPPXSPXXXRPPXSPPKXPXXXPFXPXPXXXNGXTFPXXPP 851
P P G G P R P +P RPP P + P+ P P G P PP
Sbjct: 105 PGPAGTPGKPGRPGKPGAPGLPGNPG--RPPQQPCEPITPPPWKPCPQGPPGPPGPPGPP 162
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/43 (30%), Positives = 15/43 (34%)
Frame = +3
Query: 684 PXGGXPXRTXXIPGVSPPXSPXXXRPPXSPPKXPXXXPFXPXP 812
P P +P +PP P PP P P P P P
Sbjct: 69 PTESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPP 111
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/43 (30%), Positives = 15/43 (34%)
Frame = +3
Query: 684 PXGGXPXRTXXIPGVSPPXSPXXXRPPXSPPKXPXXXPFXPXP 812
P P +P +PP P PP P P P P P
Sbjct: 291 PTESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPP 333
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,661,736
Number of Sequences: 27780
Number of extensions: 149591
Number of successful extensions: 1003
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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