Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_F11
         (888 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr...    35   0.068
Z81110-2|CAB03259.1|  802|Caenorhabditis elegans Hypothetical pr...    35   0.068
Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical p...    31   1.1  
D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein.        31   1.1  
L23648-10|AAK95878.2|  368|Caenorhabditis elegans Hypothetical p...    29   3.4  
Z49912-9|CAA90141.2| 1067|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z49912-8|CAE54898.1| 1067|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z49907-13|CAA90091.2| 1067|Caenorhabditis elegans Hypothetical p...    28   7.8  
Z49907-12|CAE54883.1| 1067|Caenorhabditis elegans Hypothetical p...    28   7.8  

>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
           protein T01D3.3b protein.
          Length = 1011

 Score = 35.1 bits (77), Expect = 0.068
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
 Frame = +1

Query: 508 EQCVYPRQYA--GAC-PVCPERCFAPSVP--NGSCNA-CLALPRTP*SCPDVRTPFRTMH 669
           ++CV P ++A   +C  +CPE C  PSVP  +G+C+A C   P    +  DV  P     
Sbjct: 778 QRCVCPDKHAVWSSCGTLCPEYCGQPSVPVCSGTCSAGCHCAPGFVRARNDVTAPCVPRE 837

Query: 670 KCSN 681
            CS+
Sbjct: 838 SCSS 841


>Z81110-2|CAB03259.1|  802|Caenorhabditis elegans Hypothetical
           protein T01D3.3a protein.
          Length = 802

 Score = 35.1 bits (77), Expect = 0.068
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
 Frame = +1

Query: 508 EQCVYPRQYA--GAC-PVCPERCFAPSVP--NGSCNA-CLALPRTP*SCPDVRTPFRTMH 669
           ++CV P ++A   +C  +CPE C  PSVP  +G+C+A C   P    +  DV  P     
Sbjct: 569 QRCVCPDKHAVWSSCGTLCPEYCGQPSVPVCSGTCSAGCHCAPGFVRARNDVTAPCVPRE 628

Query: 670 KCSN 681
            CS+
Sbjct: 629 SCSS 632


>Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical protein
            T04A8.14 protein.
          Length = 1521

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 30/126 (23%), Positives = 49/126 (38%), Gaps = 3/126 (2%)
 Frame = +1

Query: 142  VYCGELPNTIYSCLGNPKIIQPEVSEKCNKPISECDKTRCIFKESGWAKNNVIDKKKVSD 321
            V C   P    +C G  KI   +VSEK +  +   D +R   +   WA+   +D  +V D
Sbjct: 988  VGCKLGPKVFMNCAGFIKIDTIKVSEKTDAYVEVLDGSRVHPETYEWARKMAVDALEVDD 1047

Query: 322  YFEQFA--KDNPDWSAAVQNFKTTCLSDSLKPQGV-DTNCPAYDIIHCALISFIKFASPS 492
              +  A  ++  +    +++      +D L  QG  +     YDI       +     P 
Sbjct: 1048 SADPTAALQEIMESPDRLRDLDLDAFADELSRQGFGEKKSTLYDISSELSARYKDLRQPF 1107

Query: 493  QWSTSE 510
            Q  T E
Sbjct: 1108 QEPTGE 1113


>Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical
            protein T04A8.14 protein.
          Length = 1521

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 30/126 (23%), Positives = 49/126 (38%), Gaps = 3/126 (2%)
 Frame = +1

Query: 142  VYCGELPNTIYSCLGNPKIIQPEVSEKCNKPISECDKTRCIFKESGWAKNNVIDKKKVSD 321
            V C   P    +C G  KI   +VSEK +  +   D +R   +   WA+   +D  +V D
Sbjct: 988  VGCKLGPKVFMNCAGFIKIDTIKVSEKTDAYVEVLDGSRVHPETYEWARKMAVDALEVDD 1047

Query: 322  YFEQFA--KDNPDWSAAVQNFKTTCLSDSLKPQGV-DTNCPAYDIIHCALISFIKFASPS 492
              +  A  ++  +    +++      +D L  QG  +     YDI       +     P 
Sbjct: 1048 SADPTAALQEIMESPDRLRDLDLDAFADELSRQGFGEKKSTLYDISSELSARYKDLRQPF 1107

Query: 493  QWSTSE 510
            Q  T E
Sbjct: 1108 QEPTGE 1113


>D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein.
          Length = 1521

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 30/126 (23%), Positives = 49/126 (38%), Gaps = 3/126 (2%)
 Frame = +1

Query: 142  VYCGELPNTIYSCLGNPKIIQPEVSEKCNKPISECDKTRCIFKESGWAKNNVIDKKKVSD 321
            V C   P    +C G  KI   +VSEK +  +   D +R   +   WA+   +D  +V D
Sbjct: 988  VGCKLGPKVFMNCAGFIKIDTIKVSEKTDAYVEVLDGSRVHPETYEWARKMAVDALEVDD 1047

Query: 322  YFEQFA--KDNPDWSAAVQNFKTTCLSDSLKPQGV-DTNCPAYDIIHCALISFIKFASPS 492
              +  A  ++  +    +++      +D L  QG  +     YDI       +     P 
Sbjct: 1048 SADPTAALQEIMESPDRLRDLDLDAFADELSRQGFGEKKSTLYDISSELSARYKDLRQPF 1107

Query: 493  QWSTSE 510
            Q  T E
Sbjct: 1108 QEPTGE 1113


>L23648-10|AAK95878.2|  368|Caenorhabditis elegans Hypothetical
           protein F44B9.8 protein.
          Length = 368

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
 Frame = +1

Query: 163 NTIYSCLG--NPKIIQPEVSEKCNKPISECDKT-RCIFKESGWAKNNVI 300
           NT+Y C+G   PK ++  V    N P  +C  T +    E+G+A  +VI
Sbjct: 251 NTVYQCIGQPTPKEMKEVVKTLLNDPSKKCMNTIQTKLFENGYALQDVI 299


>Z49912-9|CAA90141.2| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6a protein.
          Length = 1067

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +1

Query: 229 KPISECDKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDNPDW 357
           + I++ D  R     + W K N  D+     YF+ F + NPDW
Sbjct: 784 RTIADYDNNRLAVVGTQW-KENFFDQ-----YFDNFTRQNPDW 820


>Z49912-8|CAE54898.1| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6b protein.
          Length = 1067

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +1

Query: 229 KPISECDKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDNPDW 357
           + I++ D  R     + W K N  D+     YF+ F + NPDW
Sbjct: 784 RTIADYDNNRLAVVGTQW-KENFFDQ-----YFDNFTRQNPDW 820


>Z49907-13|CAA90091.2| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6a protein.
          Length = 1067

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +1

Query: 229 KPISECDKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDNPDW 357
           + I++ D  R     + W K N  D+     YF+ F + NPDW
Sbjct: 784 RTIADYDNNRLAVVGTQW-KENFFDQ-----YFDNFTRQNPDW 820


>Z49907-12|CAE54883.1| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6b protein.
          Length = 1067

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +1

Query: 229 KPISECDKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDNPDW 357
           + I++ D  R     + W K N  D+     YF+ F + NPDW
Sbjct: 784 RTIADYDNNRLAVVGTQW-KENFFDQ-----YFDNFTRQNPDW 820


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,750,691
Number of Sequences: 27780
Number of extensions: 411235
Number of successful extensions: 1235
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1235
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)