Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_F09
         (879 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0119 + 25742277-25742434,25742976-25743061,25743146-257432...    56   5e-08
01_06_0671 - 31076463-31076610,31077060-31077202,31077758-310779...    44   1e-04
02_04_0464 - 23140764-23141224,23142288-23142447                       30   2.8  
01_05_0579 + 23393632-23393734,23393765-23394513,23395958-233963...    29   3.7  
03_02_0708 + 10577931-10579511,10579613-10579706,10580694-105808...    28   8.6  

>05_06_0119 +
           25742277-25742434,25742976-25743061,25743146-25743223,
           25743919-25744031,25744094-25744171,25744941-25744949,
           25744981-25745082,25745165-25745714,25745941-25746146,
           25746868-25747031,25747157-25747310
          Length = 565

 Score = 55.6 bits (128), Expect = 5e-08
 Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = +1

Query: 361 VNPFGVKFDIVTLEKAKCENV-GPPQGADSWFPGYTWRICACPHCGQHLGWTFESTDLSL 537
           VNP G   + +T+ +A    + G P    SWFPGY+W I +C  C  ++GW F++T  +L
Sbjct: 482 VNPHGFVHETITVSRATGLALDGNPSTVHSWFPGYSWTIASCTDCESNIGWLFKATKKNL 541


>01_06_0671 -
           31076463-31076610,31077060-31077202,31077758-31077963,
           31078119-31078644,31078753-31078854,31079572-31079637,
           31079710-31079822,31080260-31080345,31081007-31081146
          Length = 509

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 17/38 (44%), Positives = 21/38 (55%)
 Frame = +1

Query: 424 GPPQGADSWFPGYTWRICACPHCGQHLGWTFESTDLSL 537
           G P  A S FPGYTW I  C  C  ++GW F +   +L
Sbjct: 450 GAPSKAHSLFPGYTWTIALCAACESNIGWLFRAEKTNL 487


>02_04_0464 - 23140764-23141224,23142288-23142447
          Length = 206

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 15/43 (34%), Positives = 18/43 (41%)
 Frame = +1

Query: 418 NVGPPQGADSWFPGYTWRICACPHCGQHLGWTFESTDLSLTKA 546
           N   P GAD+ F     ++C  P      GW   S DL   KA
Sbjct: 69  NTSEPAGADAAFKSVKVKLCYAPASRTDRGWRKASDDLHKDKA 111


>01_05_0579 +
           23393632-23393734,23393765-23394513,23395958-23396315,
           23396830-23396852
          Length = 410

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +1

Query: 457 GYTWRICACPHCGQHLGWTFESTDLSLTKAKEHVHSFHG 573
           G  WR C+  + G   GW+F+  +L     +E+  +FHG
Sbjct: 25  GACWRSCSQTYDGTLKGWSFQEVELLHMDHREN-QAFHG 62


>03_02_0708 +
           10577931-10579511,10579613-10579706,10580694-10580856,
           10581286-10581491,10581854-10582062
          Length = 750

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +1

Query: 280 FSKQSPGALTIDKQNLFGHQNATVQTLVNP 369
           FS++    +    ++L G +N+T+QTL+NP
Sbjct: 560 FSRRYERIIEFAVRDLMGGKNSTIQTLINP 589


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,895,139
Number of Sequences: 37544
Number of extensions: 354130
Number of successful extensions: 677
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)