Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_F09
         (879 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118943-1|AAM50803.1|  585|Drosophila melanogaster LD28592p pro...    53   5e-07
AE014297-1078|AAF54484.1|  585|Drosophila melanogaster CG3925-PA...    53   5e-07

>AY118943-1|AAM50803.1|  585|Drosophila melanogaster LD28592p
           protein.
          Length = 585

 Score = 53.2 bits (122), Expect = 5e-07
 Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
 Frame = +1

Query: 322 NLFGHQNATVQT-LVNPFGVKFDIVTLEKAKCENVG---PPQGADSWFPGYTWRICACPH 489
           +LF      VQT   NP G   +  T+ +     +G    P    SWFPGY W I  C  
Sbjct: 467 DLFAMSKHGVQTQYCNPEGYIHETNTVYRVISHAIGYSGEPSTKFSWFPGYQWHIILCKF 526

Query: 490 CGQHLGWTFESTDLSLT 540
           C QH+GW F++   +LT
Sbjct: 527 CAQHVGWEFKAVHPNLT 543


>AE014297-1078|AAF54484.1|  585|Drosophila melanogaster CG3925-PA
           protein.
          Length = 585

 Score = 53.2 bits (122), Expect = 5e-07
 Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
 Frame = +1

Query: 322 NLFGHQNATVQT-LVNPFGVKFDIVTLEKAKCENVG---PPQGADSWFPGYTWRICACPH 489
           +LF      VQT   NP G   +  T+ +     +G    P    SWFPGY W I  C  
Sbjct: 467 DLFAMSKHGVQTQYCNPEGYIHETNTVYRVISHAIGYSGEPSTKFSWFPGYQWHIILCKF 526

Query: 490 CGQHLGWTFESTDLSLT 540
           C QH+GW F++   +LT
Sbjct: 527 CAQHVGWEFKAVHPNLT 543


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,519,881
Number of Sequences: 53049
Number of extensions: 623484
Number of successful extensions: 1263
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1263
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)