Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_F09
         (879 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68008-1|CAA92002.1|  154|Caenorhabditis elegans Hypothetical pr...    85   8e-17
Z68507-4|CAA92828.2|  414|Caenorhabditis elegans Hypothetical pr...    46   5e-05
U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical pr...    29   5.8  
AL021474-3|CAD54163.1|  519|Caenorhabditis elegans Hypothetical ...    29   5.8  

>Z68008-1|CAA92002.1|  154|Caenorhabditis elegans Hypothetical
           protein R08B4.3 protein.
          Length = 154

 Score = 84.6 bits (200), Expect = 8e-17
 Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 2/144 (1%)
 Frame = +1

Query: 205 NSKNLGQELILCRKCGADVADSHYLFSKQSPGALTIDKQNLFGHQNAT--VQTLVNPFGV 378
           +++++G+  +LCR+CGA +     L +        +  +  F     T  V  L NP   
Sbjct: 14  STRHVGE--LLCRQCGASITRQSELINITGVDQSQLQYEYDFPLAGKTTKVNVLTNPENQ 71

Query: 379 KFDIVTLEKAKCENVGPPQGADSWFPGYTWRICACPHCGQHLGWTFESTDLSLTKAKEHV 558
           KF +   + A     G PQ   +W+PGY W IC C  C +H+GW FE    +    K+  
Sbjct: 72  KFHVFGAKTAHLHFHGTPQSHATWYPGYKWTICLCKSCSRHMGWYFEPEKSTAVSEKK-- 129

Query: 559 HSFHGFILSNVLGENFTDSLIMMP 630
            SF G +L NV+  ++ D+L  +P
Sbjct: 130 -SFVGLVLDNVISADYVDTLTKVP 152


>Z68507-4|CAA92828.2|  414|Caenorhabditis elegans Hypothetical
           protein M18.6 protein.
          Length = 414

 Score = 45.6 bits (103), Expect = 5e-05
 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +1

Query: 355 TLVNPFGVKFDIVTLEKAK-CENVGPPQGADSWFPGYTWRICACPHCGQHLGWTFES 522
           T VN  G    I  L + +  +   PP    +WFP Y W I  C  C +HLGW + S
Sbjct: 300 THVNAHGFVHKITLLSEIRNYDRATPPSYEFTWFPEYAWIIIQCSRCHEHLGWEYIS 356


>U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical
           protein F21H12.6 protein.
          Length = 1374

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
 Frame = +1

Query: 259 VADSHYLFSKQSPGALTIDKQNLFGHQNATVQTLVNP-FGVKFDIVTLEKAKCENVGPPQ 435
           V  SH + + ++   LT  ++ + G    T        F  K D +    A   +VGP  
Sbjct: 187 VGPSHNIAASEALKQLTEHEKVVGGTSEKTSDKWAREDFACKVDFLK-SMASVADVGPVA 245

Query: 436 GADSWFPGYTWRIC 477
              +W  G  WR+C
Sbjct: 246 DVVTWHDGEMWRVC 259


>AL021474-3|CAD54163.1|  519|Caenorhabditis elegans Hypothetical
           protein Y32F6A.4 protein.
          Length = 519

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 462 VAGKPGISPLGWAHIFTF 409
           + GKPG  P+GW  + TF
Sbjct: 418 ITGKPGNGPVGWRDVITF 435


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,858,922
Number of Sequences: 27780
Number of extensions: 337554
Number of successful extensions: 781
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 780
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)