Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_F08
(925 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0386 + 33555682-33556344,33557138-33557299 277 7e-75
07_01_0756 + 5819367-5820038,5820847-5821005 274 6e-74
07_03_0099 + 13387533-13387641,13387647-13387864,13388497-13388871 79 4e-15
03_04_0238 - 19219040-19219218,19220296-19220350,19221606-192216... 47 2e-05
07_03_0681 + 20659789-20659839,20660030-20660170,20661294-206613... 30 3.0
12_01_0357 + 2720860-2721066,2721169-2721384,2721481-2723608,272... 29 3.9
11_04_0439 + 17749634-17749858,17750164-17750301,17750770-177509... 29 5.2
09_06_0198 - 21496692-21496991,21497111-21497258,21497341-214975... 29 5.2
02_04_0151 - 20240418-20240438,20240608-20240775,20240855-202409... 28 9.1
>03_06_0386 + 33555682-33556344,33557138-33557299
Length = 274
Score = 277 bits (680), Expect = 7e-75
Identities = 124/162 (76%), Positives = 149/162 (91%)
Frame = +1
Query: 226 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 405
++++++WVPVTKLGRLV+EG+ K+E IYL SLP+KE +I++ + P L DEV+KI PVQ
Sbjct: 38 RQEEEKWVPVTKLGRLVKEGRFSKIEEIYLHSLPVKEHQIVETLV-PGLKDEVMKITPVQ 96
Query: 406 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 585
KQTRAGQRTRFKAFV +GDNNGH+GLGVKC+KEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVVVGDNNGHVGLGVKCAKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 586 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQ 711
IG+PHTVPCKVTGKCGSVTVR++PAPRG+GIV+A VPKK+LQ
Sbjct: 157 IGQPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQ 198
>07_01_0756 + 5819367-5820038,5820847-5821005
Length = 276
Score = 274 bits (672), Expect = 6e-74
Identities = 124/162 (76%), Positives = 148/162 (91%)
Frame = +1
Query: 226 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 405
++++++WVPVTKLGRLV+E KI K+E IYL SLP+KE +I++ + P L DEV+KI PVQ
Sbjct: 41 RQEEEKWVPVTKLGRLVKENKIHKIEEIYLHSLPVKEHQIVEQLV-PGLKDEVMKITPVQ 99
Query: 406 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 585
KQTRAGQRTRFKAFV +GD +GH+GLGVKC+KEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 100 KQTRAGQRTRFKAFVVVGDGDGHVGLGVKCAKEVATAIRGAIILAKLSVVPVRRGYWGNK 159
Query: 586 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQ 711
IGKPHTVPCKVTGKCGSVTVR++PAPRG+GIV+A VPKK+LQ
Sbjct: 160 IGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAAHVPKKVLQ 201
>07_03_0099 + 13387533-13387641,13387647-13387864,13388497-13388871
Length = 233
Score = 79.4 bits (187), Expect = 4e-15
Identities = 45/90 (50%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Frame = +1
Query: 445 FVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG-KPHTVPCKVT 621
FV +GD + HI LGVKC+K AT + GAIILA + G I KPHTV CKV
Sbjct: 2 FVVVGDGDSHIELGVKCAK--ATTMSGAIILA---MFRCAEGATRETISRKPHTVSCKVA 56
Query: 622 GKCGSVTVRLIPAPRGTGIVSAPVPKKLLQ 711
K GSVTVR++ P G+ +V+ VPKK+L+
Sbjct: 57 DKYGSVTVRMMLPPMGSSVVATRVPKKVLK 86
>03_04_0238 -
19219040-19219218,19220296-19220350,19221606-19221690,
19222068-19222798
Length = 349
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/63 (33%), Positives = 39/63 (61%)
Frame = +1
Query: 373 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 552
++ V+++ V K + G++ F+A V +GD GH+G+GV +KEV AI A + + ++
Sbjct: 171 SERVVQVNRVTKVVKGGRQLSFRAIVVVGDMKGHVGVGVGKAKEVTEAITKAAMNGRRNL 230
Query: 553 LPV 561
+ V
Sbjct: 231 VTV 233
>07_03_0681 +
20659789-20659839,20660030-20660170,20661294-20661399,
20661625-20661806,20661888-20662113,20662198-20662624,
20662844-20663189,20663271-20663849
Length = 685
Score = 29.9 bits (64), Expect = 3.0
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = -2
Query: 618 DLARDGVWLSDLVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMT 469
DL D ++ + + + W NR +++ + G G ALH TNM+
Sbjct: 354 DLDEDNRGMAQIRDDLAGAMWNNRGMAEAGGGNGGHGGHHGALHWTTNMS 403
>12_01_0357 +
2720860-2721066,2721169-2721384,2721481-2723608,
2723699-2724124,2724242-2724546,2724660-2724823,
2724899-2724980
Length = 1175
Score = 29.5 bits (63), Expect = 3.9
Identities = 22/84 (26%), Positives = 34/84 (40%)
Frame = -3
Query: 800 IQRGIAAQXLQFPSASDHELRCSSPVHQPF*RSFLGTGADTIPVPRGAGISRTVTEPHLP 621
+QR + Q PSA H L + QP + + G P + G E +
Sbjct: 484 LQRSLHVSQQQMPSAQHHALAHTPQGQQP---TMMAQGIQQTPQHQHVGHHALRPEIYAS 540
Query: 620 VTLQGTVCGFPILLPQ*PLRTGKT 549
+ Q GFP+ P P +TG++
Sbjct: 541 IPPQAAPQGFPLNAPA-PSQTGQS 563
>11_04_0439 +
17749634-17749858,17750164-17750301,17750770-17750943,
17751099-17751184,17751264-17751525,17751616-17751815,
17753631-17754086,17754198-17754474,17754694-17754828,
17754946-17755026,17756305-17756400,17756676-17756771,
17756844-17756900,17756975-17757043,17757158-17757237,
17758185-17758329,17758422-17758511,17758914-17758994,
17759103-17759198,17759279-17759335,17759417-17759461,
17759547-17759612,17760304-17760350,17762771-17762865,
17763375-17763393,17763438-17763498,17763637-17763660
Length = 1085
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -2
Query: 507 DFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLYRHD 391
+F+A LHT +M V +E C LS F+ +HD
Sbjct: 655 EFIAYLHTYVDMLHKVDEIGDTMEDCYLSSPIKFVSKHD 693
>09_06_0198 -
21496692-21496991,21497111-21497258,21497341-21497578,
21497679-21497889,21497977-21498170,21498263-21498364,
21498525-21499879,21501193-21501494,21501600-21501750,
21501838-21502102,21502155-21502362,21502467-21502660,
21502749-21502850,21503481-21503680,21504010-21504846,
21505806-21506107,21506209-21506359,21506447-21506684,
21506764-21506971,21507078-21507271,21507322-21507462,
21513484-21514811,21515923-21516227,21516331-21516481,
21516570-21516807,21516881-21517088,21517197-21517366,
21517451-21517549,21517708-21519029,21521601-21521683
Length = 3314
Score = 29.1 bits (62), Expect = 5.2
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -2
Query: 609 RDGVWLSDLVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANG 451
R VW++D TPVT+S+ LS NS++ D + TN+T A G
Sbjct: 105 RTVVWVADRGTPVTNSSSSAPTLSLTNSSNLVLSDADGGVRWTTNITDDAAGG 157
>02_04_0151 -
20240418-20240438,20240608-20240775,20240855-20240962,
20241519-20241605,20241687-20241728,20241875-20241937,
20242007-20242069,20242129-20242497,20242577-20242669,
20242746-20242838,20242942-20243145,20243305-20243549,
20243649-20243808
Length = 571
Score = 28.3 bits (60), Expect = 9.1
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -2
Query: 732 QSCTPAILKKLLRNWRRHNSSTTRGRNQPDCYRTTL 625
QSC ILK R+WRR +S QP R+ L
Sbjct: 142 QSCKQWILKSTGRDWRRFKASLKTAYFQPKKKRSAL 177
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,409,130
Number of Sequences: 37544
Number of extensions: 481837
Number of successful extensions: 1396
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1393
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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