Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_F08
(925 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 320 2e-87
U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 320 2e-87
AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 320 2e-87
AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 320 2e-87
X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 319 4e-87
BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p pro... 31 2.9
AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA... 31 2.9
>U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 320 bits (786), Expect = 2e-87
Identities = 152/161 (94%), Positives = 155/161 (96%)
Frame = +1
Query: 226 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 405
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 406 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 585
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 586 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLL 708
IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLL 197
Score = 31.1 bits (67), Expect = 2.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 698 RSFFRMAGVQDCYTSARG 751
+ MAG++DCYTSARG
Sbjct: 194 KKLLTMAGIEDCYTSARG 211
>U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 320 bits (786), Expect = 2e-87
Identities = 152/161 (94%), Positives = 155/161 (96%)
Frame = +1
Query: 226 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 405
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 406 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 585
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 586 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLL 708
IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLL 197
Score = 31.1 bits (67), Expect = 2.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 698 RSFFRMAGVQDCYTSARG 751
+ MAG++DCYTSARG
Sbjct: 194 KKLLTMAGIEDCYTSARG 211
>AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p
protein.
Length = 267
Score = 320 bits (786), Expect = 2e-87
Identities = 152/161 (94%), Positives = 155/161 (96%)
Frame = +1
Query: 226 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 405
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 406 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 585
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 586 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLL 708
IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLL 197
Score = 31.1 bits (67), Expect = 2.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 698 RSFFRMAGVQDCYTSARG 751
+ MAG++DCYTSARG
Sbjct: 194 KKLLTMAGIEDCYTSARG 211
>AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA
protein.
Length = 267
Score = 320 bits (786), Expect = 2e-87
Identities = 152/161 (94%), Positives = 155/161 (96%)
Frame = +1
Query: 226 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 405
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 406 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 585
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 586 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLL 708
IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLL 197
Score = 31.1 bits (67), Expect = 2.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 698 RSFFRMAGVQDCYTSARG 751
+ MAG++DCYTSARG
Sbjct: 194 KKLLTMAGIEDCYTSARG 211
>X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein
S2 protein.
Length = 267
Score = 319 bits (783), Expect = 4e-87
Identities = 151/161 (93%), Positives = 155/161 (96%)
Frame = +1
Query: 226 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 405
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 406 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 585
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 586 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLL 708
IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVP+KLL
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPRKLL 197
Score = 32.3 bits (70), Expect = 0.97
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 698 RSFFRMAGVQDCYTSARG 751
R MAG++DCYTSARG
Sbjct: 194 RKLLTMAGIEDCYTSARG 211
>BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p
protein.
Length = 823
Score = 30.7 bits (66), Expect = 2.9
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -1
Query: 232 LPCRAHDHGRDHDRVHEDRRGLYLHRVIRIRREN-RHVHRLEQRPPLLN 89
L C H D R+H ++GL + V+ + REN VH + ++ LLN
Sbjct: 359 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 407
>AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA
protein.
Length = 1958
Score = 30.7 bits (66), Expect = 2.9
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -1
Query: 232 LPCRAHDHGRDHDRVHEDRRGLYLHRVIRIRREN-RHVHRLEQRPPLLN 89
L C H D R+H ++GL + V+ + REN VH + ++ LLN
Sbjct: 325 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 373
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,192,256
Number of Sequences: 53049
Number of extensions: 801438
Number of successful extensions: 3369
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2872
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4546383066
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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