Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_F02
         (868 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   4.1  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   5.4  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   9.5  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   9.5  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -2

Query: 213 ILFHVFSREKLYRPCPNMIFKEIHTKSH*RFAKM 112
           +L HV+   KL+  CP  I ++I  +    F K+
Sbjct: 9   VLKHVWFLSKLFLLCPRSIDEKIKRQERHSFYKI 42


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = -1

Query: 685 SLHHSDALFLHNLHGVIQLYVDLFP*FIPGSAGAGAS 575
           SL HS A   H L     L  D +   +PG+   GAS
Sbjct: 217 SLTHSLAASNHLLSSGQHLLQDTYKSMLPGAQTVGAS 253


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 223 WVSFFVPSATKLPRFRRQL 279
           W  FF  +ATK P F + +
Sbjct: 305 WREFFYCAATKNPNFDKMI 323


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/28 (35%), Positives = 11/28 (39%)
 Frame = +2

Query: 365 PPXXXXXXXXTSPQRRPALAAPCQGPLT 448
           PP         SP RR A + PC    T
Sbjct: 171 PPDWEGTTLSQSPNRRRASSNPCHNGAT 198


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,690
Number of Sequences: 336
Number of extensions: 4643
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23893023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)