Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_F02
(868 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U32169-3|AAC50215.1| 1629|Homo sapiens Pro-a2(XI) protein. 33 1.3
U32169-2|AAC50213.1| 1650|Homo sapiens Pro-a2(XI) protein. 33 1.3
U32169-1|AAC50214.1| 1736|Homo sapiens Pro-a2(XI) protein. 33 1.3
J04974-1|AAA52034.1| 961|Homo sapiens COL11A2 protein. 33 1.3
DQ139275-1|ABA43896.1| 1313|Homo sapiens Tax1-binding protein 2 ... 32 3.1
BX284668-3|CAH70057.1| 1898|Homo sapiens ciliary rootlet coiled-... 32 3.1
BX284668-2|CAH70055.1| 2017|Homo sapiens ciliary rootlet coiled-... 32 3.1
BC104943-1|AAI04944.1| 278|Homo sapiens FLJ39639 protein protein. 32 3.1
BC104941-1|AAI04942.1| 278|Homo sapiens FLJ39639 protein protein. 32 3.1
AL049569-4|CAI20365.1| 1898|Homo sapiens ciliary rootlet coiled-... 32 3.1
AL049569-3|CAI20363.1| 2017|Homo sapiens ciliary rootlet coiled-... 32 3.1
AK096958-1|BAC04912.1| 252|Homo sapiens protein ( Homo sapiens ... 32 3.1
AB007914-1|BAA32290.2| 1919|Homo sapiens KIAA0445 protein protein. 32 3.1
M63597-1|AAA58468.1| 599|Homo sapiens fibril-associated collage... 31 4.1
L12347-1|AAA36358.1| 718|Homo sapiens collagen protein. 31 4.1
D38163-1|BAA07368.1| 1142|Homo sapiens a1(XIX) collagen chain pr... 31 4.1
DQ079590-1|AAZ30918.1| 858|Homo sapiens ZXD-like zinc finger pr... 31 4.1
BC113364-1|AAI13365.1| 1142|Homo sapiens collagen, type XIX, alp... 31 4.1
BC113362-1|AAI13363.1| 1142|Homo sapiens collagen, type XIX, alp... 31 4.1
AY936556-1|AAX23974.1| 858|Homo sapiens ZXD family zinc finger ... 31 4.1
AL359539-1|CAI16492.1| 1142|Homo sapiens collagen type XIX alpha... 31 4.1
AL160262-5|CAI42322.1| 1142|Homo sapiens collagen type XIX alpha... 31 4.1
AL136445-2|CAI42716.1| 1142|Homo sapiens collagen type XIX alpha... 31 4.1
AL133388-3|CAI42497.1| 1142|Homo sapiens collagen type XIX alpha... 31 4.1
AL118519-1|CAB99331.2| 1142|Homo sapiens collagen type XIX alpha... 31 4.1
AB004629-1|BAA23309.1| 1143|Homo sapiens Type XIX collagen a1 ch... 31 4.1
U82483-1|AAC13661.1| 382|Homo sapiens vascular addressin MAdCAM... 31 7.2
AK098372-1|BAC05294.1| 243|Homo sapiens protein ( Homo sapiens ... 31 7.2
BX248309-1|CAM26005.1| 1622|Homo sapiens collagen, type XI, alph... 30 9.5
BC128464-1|AAI28465.1| 235|Homo sapiens myc target 1 protein. 30 9.5
BC128463-1|AAI28464.1| 235|Homo sapiens myc target 1 protein. 30 9.5
BC022556-1|AAH22556.2| 220|Homo sapiens MYCT1 protein protein. 30 9.5
BC003533-1|AAH03533.1| 420|Homo sapiens kringle containing tran... 30 9.5
AL845446-3|CAI95551.1| 1650|Homo sapiens collagen, type XI, alph... 30 9.5
AL844527-6|CAI41834.1| 1650|Homo sapiens collagen, type XI, alph... 30 9.5
AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alp... 30 9.5
AL645940-2|CAI18063.2| 1650|Homo sapiens collagen type XI alpha ... 30 9.5
AL390960-1|CAI23573.1| 235|Homo sapiens myc target 1 protein. 30 9.5
AL031228-16|CAA20240.1| 1736|Homo sapiens collagen type XI alpha... 30 9.5
AL031228-15|CAI95623.1| 1650|Homo sapiens collagen type XI alpha... 30 9.5
AK223422-1|BAD97142.1| 420|Homo sapiens kringle-containing tran... 30 9.5
AK075033-1|BAC11365.1| 381|Homo sapiens protein ( Homo sapiens ... 30 9.5
AK027669-1|BAB55281.1| 420|Homo sapiens protein ( Homo sapiens ... 30 9.5
AK024922-1|BAB15035.1| 235|Homo sapiens protein ( Homo sapiens ... 30 9.5
AF527367-1|AAM88866.1| 235|Homo sapiens MTLC protein. 30 9.5
AB086356-1|BAC00824.1| 420|Homo sapiens kringle-containing prot... 30 9.5
>U32169-3|AAC50215.1| 1629|Homo sapiens Pro-a2(XI) protein.
Length = 1629
Score = 33.1 bits (72), Expect = 1.3
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +3
Query: 309 GAPGESGACGSAGRNGRTARPRP 377
G+PGE GA GS G GR RP P
Sbjct: 908 GSPGERGAAGSGGPIGRQGRPGP 930
>U32169-2|AAC50213.1| 1650|Homo sapiens Pro-a2(XI) protein.
Length = 1650
Score = 33.1 bits (72), Expect = 1.3
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +3
Query: 309 GAPGESGACGSAGRNGRTARPRP 377
G+PGE GA GS G GR RP P
Sbjct: 929 GSPGERGAAGSGGPIGRQGRPGP 951
>U32169-1|AAC50214.1| 1736|Homo sapiens Pro-a2(XI) protein.
Length = 1736
Score = 33.1 bits (72), Expect = 1.3
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +3
Query: 309 GAPGESGACGSAGRNGRTARPRP 377
G+PGE GA GS G GR RP P
Sbjct: 1015 GSPGERGAAGSGGPIGRQGRPGP 1037
>J04974-1|AAA52034.1| 961|Homo sapiens COL11A2 protein.
Length = 961
Score = 33.1 bits (72), Expect = 1.3
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +3
Query: 309 GAPGESGACGSAGRNGRTARPRP 377
G+PGE GA GS G GR RP P
Sbjct: 286 GSPGERGAAGSGGPIGRQGRPGP 308
>DQ139275-1|ABA43896.1| 1313|Homo sapiens Tax1-binding protein 2
protein.
Length = 1313
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/51 (39%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = +1
Query: 322 SPARVAVPGGTDAQXXXXXXXXXXDEPST*T-RPGCAVPGPADATSPHSPD 471
SPA VPG + PST PG P P ATSP SPD
Sbjct: 754 SPAPRPVPGSPARDAPAEGSGEGLNSPSTLECSPGSQPPSPGPATSPASPD 804
>BX284668-3|CAH70057.1| 1898|Homo sapiens ciliary rootlet coiled-coil,
rootletin protein.
Length = 1898
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/51 (39%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = +1
Query: 322 SPARVAVPGGTDAQXXXXXXXXXXDEPST*T-RPGCAVPGPADATSPHSPD 471
SPA VPG + PST PG P P ATSP SPD
Sbjct: 1332 SPAPRPVPGSPARDAPAEGSGEGLNSPSTLECSPGSQPPSPGPATSPASPD 1382
>BX284668-2|CAH70055.1| 2017|Homo sapiens ciliary rootlet coiled-coil,
rootletin protein.
Length = 2017
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/51 (39%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = +1
Query: 322 SPARVAVPGGTDAQXXXXXXXXXXDEPST*T-RPGCAVPGPADATSPHSPD 471
SPA VPG + PST PG P P ATSP SPD
Sbjct: 1451 SPAPRPVPGSPARDAPAEGSGEGLNSPSTLECSPGSQPPSPGPATSPASPD 1501
>BC104943-1|AAI04944.1| 278|Homo sapiens FLJ39639 protein protein.
Length = 278
Score = 31.9 bits (69), Expect = 3.1
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3
Query: 288 PSGWLILGAPGESGACGSAGRNGRTARPRPSPR 386
P W++LG G S + G+ GRN R RPR SP+
Sbjct: 60 PIKWVVLGIRG-SNSAGNRGRN-RQLRPRTSPK 90
>BC104941-1|AAI04942.1| 278|Homo sapiens FLJ39639 protein protein.
Length = 278
Score = 31.9 bits (69), Expect = 3.1
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3
Query: 288 PSGWLILGAPGESGACGSAGRNGRTARPRPSPR 386
P W++LG G S + G+ GRN R RPR SP+
Sbjct: 60 PIKWVVLGIRG-SNSAGNRGRN-RQLRPRTSPK 90
>AL049569-4|CAI20365.1| 1898|Homo sapiens ciliary rootlet coiled-coil,
rootletin protein.
Length = 1898
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/51 (39%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = +1
Query: 322 SPARVAVPGGTDAQXXXXXXXXXXDEPST*T-RPGCAVPGPADATSPHSPD 471
SPA VPG + PST PG P P ATSP SPD
Sbjct: 1332 SPAPRPVPGSPARDAPAEGSGEGLNSPSTLECSPGSQPPSPGPATSPASPD 1382
>AL049569-3|CAI20363.1| 2017|Homo sapiens ciliary rootlet coiled-coil,
rootletin protein.
Length = 2017
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/51 (39%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = +1
Query: 322 SPARVAVPGGTDAQXXXXXXXXXXDEPST*T-RPGCAVPGPADATSPHSPD 471
SPA VPG + PST PG P P ATSP SPD
Sbjct: 1451 SPAPRPVPGSPARDAPAEGSGEGLNSPSTLECSPGSQPPSPGPATSPASPD 1501
>AK096958-1|BAC04912.1| 252|Homo sapiens protein ( Homo sapiens
cDNA FLJ39639 fis, clone SMINT2003340. ).
Length = 252
Score = 31.9 bits (69), Expect = 3.1
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3
Query: 288 PSGWLILGAPGESGACGSAGRNGRTARPRPSPR 386
P W++LG G S + G+ GRN R RPR SP+
Sbjct: 34 PIKWVVLGIRG-SNSAGNRGRN-RQLRPRTSPK 64
>AB007914-1|BAA32290.2| 1919|Homo sapiens KIAA0445 protein protein.
Length = 1919
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/51 (39%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = +1
Query: 322 SPARVAVPGGTDAQXXXXXXXXXXDEPST*T-RPGCAVPGPADATSPHSPD 471
SPA VPG + PST PG P P ATSP SPD
Sbjct: 1353 SPAPRPVPGSPARDAPAEGSGEGLNSPSTLECSPGSQPPSPGPATSPASPD 1403
>M63597-1|AAA58468.1| 599|Homo sapiens fibril-associated collagen
protein.
Length = 599
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 267 PPSTESLPSGWLILGAPGESGACGSAGRNGRTARP-RPSP 383
PP +LP I G G G G GR G+T P +P P
Sbjct: 358 PPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGP 397
>L12347-1|AAA36358.1| 718|Homo sapiens collagen protein.
Length = 718
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 267 PPSTESLPSGWLILGAPGESGACGSAGRNGRTARP-RPSP 383
PP +LP I G G G G GR G+T P +P P
Sbjct: 278 PPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGP 317
>D38163-1|BAA07368.1| 1142|Homo sapiens a1(XIX) collagen chain
precursor protein.
Length = 1142
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 267 PPSTESLPSGWLILGAPGESGACGSAGRNGRTARP-RPSP 383
PP +LP I G G G G GR G+T P +P P
Sbjct: 383 PPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGP 422
>DQ079590-1|AAZ30918.1| 858|Homo sapiens ZXD-like zinc finger
protein protein.
Length = 858
Score = 31.5 bits (68), Expect = 4.1
Identities = 25/81 (30%), Positives = 31/81 (38%), Gaps = 5/81 (6%)
Frame = -3
Query: 560 FLVTFQLS-GLAVSSVVGAWSWGPTS----ASPQVSGECGEVASAGPGTAQPGRVYVEXX 396
FLV ++ G A + G+ P S AS G G A+ GPG A G V +
Sbjct: 75 FLVLLEVPHGGAAAEAAGSQEAEPGSRVNLASRPEQGPSGPAAAPGPGVAPAGAVTISSQ 134
Query: 395 XXXXXXXXXXGCASVPPGTAT 333
S PPG AT
Sbjct: 135 DLLVRLDRGVLALSAPPGPAT 155
>BC113364-1|AAI13365.1| 1142|Homo sapiens collagen, type XIX, alpha
1 protein.
Length = 1142
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 267 PPSTESLPSGWLILGAPGESGACGSAGRNGRTARP-RPSP 383
PP +LP I G G G G GR G+T P +P P
Sbjct: 383 PPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGP 422
>BC113362-1|AAI13363.1| 1142|Homo sapiens collagen, type XIX, alpha
1 protein.
Length = 1142
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 267 PPSTESLPSGWLILGAPGESGACGSAGRNGRTARP-RPSP 383
PP +LP I G G G G GR G+T P +P P
Sbjct: 383 PPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGP 422
>AY936556-1|AAX23974.1| 858|Homo sapiens ZXD family zinc finger C
protein.
Length = 858
Score = 31.5 bits (68), Expect = 4.1
Identities = 25/81 (30%), Positives = 31/81 (38%), Gaps = 5/81 (6%)
Frame = -3
Query: 560 FLVTFQLS-GLAVSSVVGAWSWGPTS----ASPQVSGECGEVASAGPGTAQPGRVYVEXX 396
FLV ++ G A + G+ P S AS G G A+ GPG A G V +
Sbjct: 75 FLVLLEVPHGGAAAEAAGSQEAEPGSRVNLASRPEQGPSGPAAAPGPGVAPAGAVTISSQ 134
Query: 395 XXXXXXXXXXGCASVPPGTAT 333
S PPG AT
Sbjct: 135 DLLVRLDRGVLALSAPPGPAT 155
>AL359539-1|CAI16492.1| 1142|Homo sapiens collagen type XIX alpha 1
protein.
Length = 1142
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 267 PPSTESLPSGWLILGAPGESGACGSAGRNGRTARP-RPSP 383
PP +LP I G G G G GR G+T P +P P
Sbjct: 383 PPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGP 422
>AL160262-5|CAI42322.1| 1142|Homo sapiens collagen type XIX alpha 1
protein.
Length = 1142
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 267 PPSTESLPSGWLILGAPGESGACGSAGRNGRTARP-RPSP 383
PP +LP I G G G G GR G+T P +P P
Sbjct: 383 PPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGP 422
>AL136445-2|CAI42716.1| 1142|Homo sapiens collagen type XIX alpha 1
protein.
Length = 1142
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 267 PPSTESLPSGWLILGAPGESGACGSAGRNGRTARP-RPSP 383
PP +LP I G G G G GR G+T P +P P
Sbjct: 383 PPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGP 422
>AL133388-3|CAI42497.1| 1142|Homo sapiens collagen type XIX alpha 1
protein.
Length = 1142
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 267 PPSTESLPSGWLILGAPGESGACGSAGRNGRTARP-RPSP 383
PP +LP I G G G G GR G+T P +P P
Sbjct: 383 PPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGP 422
>AL118519-1|CAB99331.2| 1142|Homo sapiens collagen type XIX alpha 1
protein.
Length = 1142
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 267 PPSTESLPSGWLILGAPGESGACGSAGRNGRTARP-RPSP 383
PP +LP I G G G G GR G+T P +P P
Sbjct: 383 PPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGP 422
>AB004629-1|BAA23309.1| 1143|Homo sapiens Type XIX collagen a1 chain
protein.
Length = 1143
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 267 PPSTESLPSGWLILGAPGESGACGSAGRNGRTARP-RPSP 383
PP +LP I G G G G GR G+T P +P P
Sbjct: 384 PPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGP 423
>U82483-1|AAC13661.1| 382|Homo sapiens vascular addressin MAdCAM-1
protein.
Length = 382
Score = 30.7 bits (66), Expect = 7.2
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 433 PGPADATSPHSPDTCGLALVGPQDQAPTTLDTANPD 540
P P D TSP SPDT + P +P DT +P+
Sbjct: 230 PEPPDTTSPESPDT--TSPESPDTTSPEPPDTTSPE 263
>AK098372-1|BAC05294.1| 243|Homo sapiens protein ( Homo sapiens
cDNA FLJ25506 fis, clone CBR05185. ).
Length = 243
Score = 30.7 bits (66), Expect = 7.2
Identities = 17/44 (38%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = +3
Query: 297 WLILGAPGESGACGSAGRNGRT-ARPRP--SPRCWRRALNVDPP 419
W+ G G G G G R ARP P RCWR PP
Sbjct: 2 WICPGGGGGGGGGGGGGGGDREDARPAPLCCGRCWRSGCAARPP 45
>BX248309-1|CAM26005.1| 1622|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1622
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 309 GAPGESGACGSAGRNGRTARPRP 377
G+PGE GA GS G G RP P
Sbjct: 901 GSPGERGAAGSGGPIGPPGRPGP 923
>BC128464-1|AAI28465.1| 235|Homo sapiens myc target 1 protein.
Length = 235
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 645 MVLSNFTWTCFLSLSRARRGPAPRS 571
+VL F W F+ LSR RR AP S
Sbjct: 80 LVLGGFIWAVFICLSRRRRASAPIS 104
>BC128463-1|AAI28464.1| 235|Homo sapiens myc target 1 protein.
Length = 235
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 645 MVLSNFTWTCFLSLSRARRGPAPRS 571
+VL F W F+ LSR RR AP S
Sbjct: 80 LVLGGFIWAVFICLSRRRRASAPIS 104
>BC022556-1|AAH22556.2| 220|Homo sapiens MYCT1 protein protein.
Length = 220
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 645 MVLSNFTWTCFLSLSRARRGPAPRS 571
+VL F W F+ LSR RR AP S
Sbjct: 65 LVLGGFIWAVFICLSRRRRASAPIS 89
>BC003533-1|AAH03533.1| 420|Homo sapiens kringle containing
transmembrane protein 2 protein.
Length = 420
Score = 30.3 bits (65), Expect = 9.5
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 279 ESLPSGWLILGAPGESGACGSAGRNGRTARPRPSP 383
E P W + GAPGE+G CG+ N P P+P
Sbjct: 374 EKGPRRWGLPGAPGEAGLCGT---NSPEGWPCPAP 405
>AL845446-3|CAI95551.1| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 309 GAPGESGACGSAGRNGRTARPRP 377
G+PGE GA GS G G RP P
Sbjct: 929 GSPGERGAAGSGGPIGPPGRPGP 951
>AL844527-6|CAI41834.1| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 309 GAPGESGACGSAGRNGRTARPRP 377
G+PGE GA GS G G RP P
Sbjct: 929 GSPGERGAAGSGGPIGPPGRPGP 951
>AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alpha
2 protein.
Length = 1650
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 309 GAPGESGACGSAGRNGRTARPRP 377
G+PGE GA GS G G RP P
Sbjct: 929 GSPGERGAAGSGGPIGPPGRPGP 951
>AL645940-2|CAI18063.2| 1650|Homo sapiens collagen type XI alpha 2
protein.
Length = 1650
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 309 GAPGESGACGSAGRNGRTARPRP 377
G+PGE GA GS G G RP P
Sbjct: 929 GSPGERGAAGSGGPIGPPGRPGP 951
>AL390960-1|CAI23573.1| 235|Homo sapiens myc target 1 protein.
Length = 235
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 645 MVLSNFTWTCFLSLSRARRGPAPRS 571
+VL F W F+ LSR RR AP S
Sbjct: 80 LVLGGFIWAVFICLSRRRRASAPIS 104
>AL031228-16|CAA20240.1| 1736|Homo sapiens collagen type XI alpha 2
protein.
Length = 1736
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 309 GAPGESGACGSAGRNGRTARPRP 377
G+PGE GA GS G G RP P
Sbjct: 1015 GSPGERGAAGSGGPIGPPGRPGP 1037
>AL031228-15|CAI95623.1| 1650|Homo sapiens collagen type XI alpha 2
protein.
Length = 1650
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 309 GAPGESGACGSAGRNGRTARPRP 377
G+PGE GA GS G G RP P
Sbjct: 929 GSPGERGAAGSGGPIGPPGRPGP 951
>AK223422-1|BAD97142.1| 420|Homo sapiens kringle-containing
transmembrane protein 2 isoform b precursor variant
protein.
Length = 420
Score = 30.3 bits (65), Expect = 9.5
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 279 ESLPSGWLILGAPGESGACGSAGRNGRTARPRPSP 383
E P W + GAPGE+G CG+ N P P+P
Sbjct: 374 EKGPRRWGLPGAPGEAGLCGT---NSPEGWPCPAP 405
>AK075033-1|BAC11365.1| 381|Homo sapiens protein ( Homo sapiens
cDNA FLJ90552 fis, clone OVARC1000811, highly similar to
Kringle-containing transmembrane protein 2 isoform b
precursor. ).
Length = 381
Score = 30.3 bits (65), Expect = 9.5
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 279 ESLPSGWLILGAPGESGACGSAGRNGRTARPRPSP 383
E P W + GAPGE+G CG+ N P P+P
Sbjct: 335 EKGPRRWGLPGAPGEAGLCGT---NSPEGWPCPAP 366
>AK027669-1|BAB55281.1| 420|Homo sapiens protein ( Homo sapiens
cDNA FLJ14763 fis, clone NT2RP3003621. ).
Length = 420
Score = 30.3 bits (65), Expect = 9.5
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 279 ESLPSGWLILGAPGESGACGSAGRNGRTARPRPSP 383
E P W + GAPGE+G CG+ N P P+P
Sbjct: 374 EKGPRRWGLPGAPGEAGLCGT---NSPEGWPCPAP 405
>AK024922-1|BAB15035.1| 235|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21269 fis, clone COL01745. ).
Length = 235
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 645 MVLSNFTWTCFLSLSRARRGPAPRS 571
+VL F W F+ LSR RR AP S
Sbjct: 80 LVLGGFIWAVFICLSRRRRASAPIS 104
>AF527367-1|AAM88866.1| 235|Homo sapiens MTLC protein.
Length = 235
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 645 MVLSNFTWTCFLSLSRARRGPAPRS 571
+VL F W F+ LSR RR AP S
Sbjct: 80 LVLGGFIWAVFICLSRRRRASAPIS 104
>AB086356-1|BAC00824.1| 420|Homo sapiens kringle-containing protein
protein.
Length = 420
Score = 30.3 bits (65), Expect = 9.5
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 279 ESLPSGWLILGAPGESGACGSAGRNGRTARPRPSP 383
E P W + GAPGE+G CG+ N P P+P
Sbjct: 374 EKGPRRWGLPGAPGEAGLCGT---NSPEGWPCPAP 405
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,684,893
Number of Sequences: 237096
Number of extensions: 3484561
Number of successful extensions: 14249
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 9496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14083
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11095746082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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