Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_F02
         (868 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   6.4  
U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    22   8.4  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   8.4  
AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor pro...    22   8.4  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = -1

Query: 850 TCHHCTSQRKRLNPGKELLP 791
           TC  C   R  L+P    LP
Sbjct: 374 TCRKCFKSRTNLDPSNRKLP 393


>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +2

Query: 401 PQRRPALAAPCQGPLTP 451
           P RRP    P QGP  P
Sbjct: 29  PGRRPFPTFPGQGPFNP 45


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 223 WVSFFVPSATKLPRFRR 273
           W  FF  +ATK P F R
Sbjct: 309 WREFFYCAATKNPNFDR 325


>AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor
           protein.
          Length = 33

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +2

Query: 401 PQRRPALAAPCQGPLTP 451
           P RRP    P QGP  P
Sbjct: 15  PGRRPFPTFPGQGPFNP 31


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 246,577
Number of Sequences: 438
Number of extensions: 5821
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)