Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_E22
(1064 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 43 4e-04
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 39 0.007
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 39 0.007
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 38 0.016
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 37 0.021
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 35 0.11
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 34 0.20
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 34 0.20
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 34 0.20
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 34 0.20
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 34 0.20
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 34 0.20
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 33 0.26
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 33 0.26
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 33 0.35
Z70682-4|CAA94581.1| 299|Caenorhabditis elegans Hypothetical pr... 33 0.46
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 32 0.60
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 32 0.80
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 32 0.80
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 32 0.80
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 31 1.1
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 26 1.3
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 31 1.4
U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protei... 31 1.4
U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protei... 31 1.4
AF047652-1|AAO44912.1| 294|Caenorhabditis elegans Collagen prot... 31 1.4
Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 30 2.4
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 30 2.4
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 25 2.8
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 30 3.2
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 30 3.2
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 30 3.2
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 30 3.2
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 30 3.2
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 30 3.2
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 30 3.2
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 30 3.2
AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein. 30 3.2
AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical ... 30 3.2
AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen prot... 30 3.2
AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain (... 30 3.2
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 29 4.3
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 4.3
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 4.3
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 29 4.3
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 29 4.3
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 29 4.3
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 29 4.3
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 29 5.6
L11247-3|AAA28008.1| 278|Caenorhabditis elegans Collagen protei... 29 5.6
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 5.6
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 29 5.6
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 29 5.6
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 29 7.4
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 29 7.4
Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical pr... 29 7.4
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 29 7.4
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 29 7.4
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 29 7.4
AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : short... 29 7.4
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 28 9.8
U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helica... 28 9.8
M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein. 28 9.8
M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein. 28 9.8
AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen prot... 28 9.8
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 42.7 bits (96), Expect = 4e-04
Identities = 40/133 (30%), Positives = 41/133 (30%), Gaps = 2/133 (1%)
Frame = -2
Query: 985 WAXAGXGXGXGXAGSVXGAWRAXRGXXRPXAGACPVIPGXXGXXGVGFXGGPXVGXPGXX 806
W G G G G G W R G G G G GG G G
Sbjct: 20 WGPGGWGGGPGR----WGGWGGNRWGGGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGG 75
Query: 805 PPLXXPGXSR--WGAXCXXXRPXGXAWPXWAGXVXGGXGGXGGGGSXXXRXXAXXGFXPG 632
G R WG R G W G GG G GGGG+ G G
Sbjct: 76 GNWGGNGGGRGDWGGNGGGGRGGGGRGD-WGGNNNGGGGNWGGGGNNDGGWGGNNGGGGG 134
Query: 631 GVGGXE*XXGGDG 593
G GG GGDG
Sbjct: 135 GRGGG--GRGGDG 145
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 38.7 bits (86), Expect = 0.007
Identities = 38/132 (28%), Positives = 38/132 (28%)
Frame = -2
Query: 976 AGXGXGXGXAGSVXGAWRAXRGXXRPXAGACPVIPGXXGXXGVGFXGGPXVGXPGXXPPL 797
AG G G G G G G P C G G G G GG P P
Sbjct: 25 AGGGGGGGGCGGGCGGGCGGGGGCAPPPAPCG---GGCGGGGGGCGGGGGCAPP---PAP 78
Query: 796 XXPGXSRWGAXCXXXRPXGXAWPXWAGXVXGGXGGXGGGGSXXXRXXAXXGFXPGGVGGX 617
G G C G G GG GG GGG G GG GG
Sbjct: 79 CGGGCGGGGGGCGGGG-GGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGG 137
Query: 616 E*XXGGDGXXXG 581
G G G
Sbjct: 138 GCGGGSSGGCGG 149
Score = 29.1 bits (62), Expect = 5.6
Identities = 38/138 (27%), Positives = 39/138 (28%), Gaps = 2/138 (1%)
Frame = -2
Query: 982 AXAGXGXGXGXAGSVXGAWRAXRGXXRPXAGACPVIPGXXGXXGVGFXGGPXVGXPGXXP 803
A G G G G G G G G C G G G G GG G G
Sbjct: 77 APCGGGCGGGGGGCGGGGGGCGGG------GGCGGGGGGCGGGGGGCGGGGG-GCGGGGG 129
Query: 802 PLXXPGXSRWGAXCXXXRPXGXAWPXWAGXVXGGXGGX--GGGGSXXXRXXAXXGFXPGG 629
G G C G G GG GG GGGG G+
Sbjct: 130 GCGGGG----GGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAP 185
Query: 628 VGGXE*XXGGDGXXXGPA 575
GG GG G A
Sbjct: 186 SGGGGCGGGGSSGGGGYA 203
Score = 29.1 bits (62), Expect = 5.6
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 678 PPPPXPPXPPXTXPAHXG 731
PPPP PP PP P G
Sbjct: 303 PPPPPPPPPPAPAPVSSG 320
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 38.7 bits (86), Expect = 0.007
Identities = 38/132 (28%), Positives = 38/132 (28%)
Frame = -2
Query: 976 AGXGXGXGXAGSVXGAWRAXRGXXRPXAGACPVIPGXXGXXGVGFXGGPXVGXPGXXPPL 797
AG G G G G G G P C G G G G GG P P
Sbjct: 25 AGGGGGGGGCGGGCGGGCGGGGGCAPPPAPCG---GGCGGGGGGCGGGGGCAPP---PAP 78
Query: 796 XXPGXSRWGAXCXXXRPXGXAWPXWAGXVXGGXGGXGGGGSXXXRXXAXXGFXPGGVGGX 617
G G C G G GG GG GGG G GG GG
Sbjct: 79 CGGGCGGGGGGCGGGG-GGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGG 137
Query: 616 E*XXGGDGXXXG 581
G G G
Sbjct: 138 GCGGGSSGGCGG 149
Score = 29.1 bits (62), Expect = 5.6
Identities = 38/138 (27%), Positives = 39/138 (28%), Gaps = 2/138 (1%)
Frame = -2
Query: 982 AXAGXGXGXGXAGSVXGAWRAXRGXXRPXAGACPVIPGXXGXXGVGFXGGPXVGXPGXXP 803
A G G G G G G G G C G G G G GG G G
Sbjct: 77 APCGGGCGGGGGGCGGGGGGCGGG------GGCGGGGGGCGGGGGGCGGGGG-GCGGGGG 129
Query: 802 PLXXPGXSRWGAXCXXXRPXGXAWPXWAGXVXGGXGGX--GGGGSXXXRXXAXXGFXPGG 629
G G C G G GG GG GGGG G+
Sbjct: 130 GCGGGG----GGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAP 185
Query: 628 VGGXE*XXGGDGXXXGPA 575
GG GG G A
Sbjct: 186 SGGGGCGGGGSSGGGGYA 203
Score = 29.1 bits (62), Expect = 5.6
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 678 PPPPXPPXPPXTXPAHXG 731
PPPP PP PP P G
Sbjct: 303 PPPPPPPPPPAPAPVSSG 320
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 37.5 bits (83), Expect = 0.016
Identities = 32/102 (31%), Positives = 39/102 (38%), Gaps = 4/102 (3%)
Frame = -2
Query: 976 AGXGXGXGXAGSVXGAWRAXR--GXXRPXAGACPVIPGXXGXXGVGFXGGPXVGX--PGX 809
A G G G AG GA++A G AGA P+ G G G G+ G +G G
Sbjct: 64 AQPGGGYGGAGGFGGAYQAAPAIGGGGSYAGAGPIGGGFGGAQG-GYAGAGPIGGGAQGG 122
Query: 808 XPPLXXPGXSRWGAXCXXXRPXGXAWPXWAGXVXGGXGGXGG 683
G G G A +AG + GG G GG
Sbjct: 123 YAGAGPIGGGAQGGYAGAGPIGGGAQGGYAGPIGGGAGYQGG 164
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 37.1 bits (82), Expect = 0.021
Identities = 36/132 (27%), Positives = 40/132 (30%)
Frame = -2
Query: 973 GXGXGXGXAGSVXGAWRAXRGXXRPXAGACPVIPGXXGXXGVGFXGGPXVGXPGXXPPLX 794
G G G G G G G + G G G+G GG G G
Sbjct: 108 GMGGGGYGGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGG---GGGGGGDFGG 164
Query: 793 XPGXSRWGAXCXXXRPXGXAWPXWAGXVXGGXGGXGGGGSXXXRXXAXXGFXPGGVGGXE 614
G G G + G GG GG GGG G+ GG GG
Sbjct: 165 YGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGGYGGGGDGGYG 224
Query: 613 *XXGGDGXXXGP 578
GG G GP
Sbjct: 225 -PSGGYGGGYGP 235
Score = 35.1 bits (77), Expect = 0.086
Identities = 38/140 (27%), Positives = 44/140 (31%), Gaps = 3/140 (2%)
Frame = -2
Query: 985 WAXAGXGXGXGXAGSVXGAWRAXRGXXRPXAGACPVIPGXXGXXGVGFXGGPXVGXPGXX 806
+ G G G G + G G G G G G G GG G PG
Sbjct: 94 YGQGGYGGGGDFGGGMGGGGYGGGGYGGGGDGG-----GGYGGYGGGGYGGMG-GGPGGY 147
Query: 805 PPLXXPGXSRWGAXCXXXRPXGXAWPXWAGXVXGGXGGXGGGGSXXXRXXAXXG---FXP 635
G G G + G GG GG G GG G +
Sbjct: 148 GMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGG 207
Query: 634 GGVGGXE*XXGGDGXXXGPA 575
GG+GG GGDG GP+
Sbjct: 208 GGMGGGGYGGGGDG-GYGPS 226
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 34.7 bits (76), Expect = 0.11
Identities = 35/102 (34%), Positives = 35/102 (34%), Gaps = 3/102 (2%)
Frame = -2
Query: 889 ACPVIPGXXGXXGV-GFXGGPXVGXPGXXPPLXXPGXSRWGAXCXXXRPXGXAWPXWAGX 713
A P PG G G G GGP G PG PG C P G
Sbjct: 272 AQPGPPGPPGPPGNDGQPGGP--GQPGGPGQDGGPGTDAAYCPCPPRTPAGGGGGG-DFP 328
Query: 712 VXGGXGGX--GGGGSXXXRXXAXXGFXPGGVGGXE*XXGGDG 593
GG GG GGGG A G GG GG GG G
Sbjct: 329 AGGGGGGYSTGGGGGRADSGGAAGG--AGGAGGYSGGGGGGG 368
Score = 33.1 bits (72), Expect = 0.35
Identities = 29/98 (29%), Positives = 31/98 (31%), Gaps = 2/98 (2%)
Frame = -2
Query: 967 GXGXGXAGSVXGAWRAXRGXXRPXAGACPVIPGXXGXXGVGFX--GGPXVGXPGXXPPLX 794
G G G + G RA G AG G G G G GG G G P
Sbjct: 330 GGGGGGYSTGGGGGRADSGGAAGGAGGAGGYSGGGGGGGGGAAAGGGYNAGGGGGGAPQA 389
Query: 793 XPGXSRWGAXCXXXRPXGXAWPXWAGXVXGGXGGXGGG 680
P A P G + G GG GG GG
Sbjct: 390 APAPQAAPAPAA---PAGGGYNAGGGGGAGGGGGYAGG 424
Score = 29.1 bits (62), Expect = 5.6
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -2
Query: 706 GGXGGXGGGGSXXXRXXAXXGFXPGGVGGXE*XXGGDG 593
GG GG GGGG A P G G G DG
Sbjct: 112 GGGGGGGGGGGGGCHCAAQASGCPAGPPGPPGEAGTDG 149
Score = 29.1 bits (62), Expect = 5.6
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +3
Query: 678 PPPPXPPXPPXTXPAHXGXAXPXGRXXXXXAP 773
PPPP PP PP P + G G+ AP
Sbjct: 210 PPPPGPPGPPG-PPGNDGQPGAPGQDGQPGAP 240
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 33.9 bits (74), Expect = 0.20
Identities = 20/70 (28%), Positives = 22/70 (31%)
Frame = -2
Query: 883 PVIPGXXGXXGVGFXGGPXVGXPGXXPPLXXPGXSRWGAXCXXXRPXGXAWPXWAGXVXG 704
P PG G G GGP P P P + P G P A G
Sbjct: 200 PGAPGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAPG 259
Query: 703 GXGGXGGGGS 674
G GG G+
Sbjct: 260 ADGNPGGPGT 269
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +2
Query: 680 PAPXXPXAPPHXAGPXRPXGAXGPXXXTXGSPA 778
P P PP AGP P G GP GSPA
Sbjct: 146 PCQPCPGGPPGPAGPAGPPGPPGP-DGNPGSPA 177
Score = 29.9 bits (64), Expect = 3.2
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -3
Query: 813 GXXRPXVXXGXAAGEPXVXXCGPXAPXGRXGPAXXGGAXGXXGAGXLXXXAP 658
G P GEP GP P G GPA GA G G G P
Sbjct: 205 GPGEPGASEQGGPGEP-----GPAGPPGPAGPAGNDGAPGTGGPGPAGPKGP 251
Score = 28.7 bits (61), Expect = 7.4
Identities = 24/81 (29%), Positives = 26/81 (32%)
Frame = -2
Query: 835 GPXVGXPGXXPPLXXPGXSRWGAXCXXXRPXGXAWPXWAGXVXGGXGGXGGGGSXXXRXX 656
GP G PG P PG + P G A P G GG G G+
Sbjct: 159 GP-AGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGP 217
Query: 655 AXXGFXPGGVGGXE*XXGGDG 593
G P G G G DG
Sbjct: 218 GEPG--PAGPPGPAGPAGNDG 236
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 33.9 bits (74), Expect = 0.20
Identities = 20/70 (28%), Positives = 22/70 (31%)
Frame = -2
Query: 883 PVIPGXXGXXGVGFXGGPXVGXPGXXPPLXXPGXSRWGAXCXXXRPXGXAWPXWAGXVXG 704
P PG G G GGP P P P + P G P A G
Sbjct: 200 PGAPGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAPG 259
Query: 703 GXGGXGGGGS 674
G GG G+
Sbjct: 260 ADGNPGGPGT 269
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +2
Query: 680 PAPXXPXAPPHXAGPXRPXGAXGPXXXTXGSPA 778
P P PP AGP P G GP GSPA
Sbjct: 146 PCQPCPGGPPGPAGPAGPPGPPGP-DGNPGSPA 177
Score = 29.9 bits (64), Expect = 3.2
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -3
Query: 813 GXXRPXVXXGXAAGEPXVXXCGPXAPXGRXGPAXXGGAXGXXGAGXLXXXAP 658
G P GEP GP P G GPA GA G G G P
Sbjct: 205 GPGEPGASEQGGPGEP-----GPAGPPGPAGPAGNDGAPGTGGPGPAGPKGP 251
Score = 28.7 bits (61), Expect = 7.4
Identities = 24/81 (29%), Positives = 26/81 (32%)
Frame = -2
Query: 835 GPXVGXPGXXPPLXXPGXSRWGAXCXXXRPXGXAWPXWAGXVXGGXGGXGGGGSXXXRXX 656
GP G PG P PG + P G A P G GG G G+
Sbjct: 159 GP-AGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGP 217
Query: 655 AXXGFXPGGVGGXE*XXGGDG 593
G P G G G DG
Sbjct: 218 GEPG--PAGPPGPAGPAGNDG 236
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 33.9 bits (74), Expect = 0.20
Identities = 28/101 (27%), Positives = 31/101 (30%), Gaps = 4/101 (3%)
Frame = +3
Query: 684 PPXPPXPPXTXPAHXGXAXPXGRXXXXXAPQRLHPGXXRG--GHXXXXXXXXXXXXXXXX 857
PP PP PP P G A GR P P G G
Sbjct: 156 PPGPPGPPGA-PGDPGEAGTPGRPGTDATPGLPGPRGPPGPPGEAGQPGPQGDAGTPAQS 214
Query: 858 XPXNPGITGQAPAXGRSXPRXARHAPXTE--PAXPXPXPXP 974
P PG G+A G + P AP + P P P P
Sbjct: 215 EPLTPGAPGEAGDAGPAGPPGPPGAPGNDGPPGPPGPKGSP 255
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 33.9 bits (74), Expect = 0.20
Identities = 20/70 (28%), Positives = 22/70 (31%)
Frame = -2
Query: 883 PVIPGXXGXXGVGFXGGPXVGXPGXXPPLXXPGXSRWGAXCXXXRPXGXAWPXWAGXVXG 704
P PG G G GGP P P P + P G P A G
Sbjct: 200 PGAPGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAPG 259
Query: 703 GXGGXGGGGS 674
G GG G+
Sbjct: 260 ADGNPGGPGT 269
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +2
Query: 680 PAPXXPXAPPHXAGPXRPXGAXGPXXXTXGSPA 778
P P PP AGP P G GP GSPA
Sbjct: 146 PCQPCPGGPPGPAGPAGPPGPPGP-DGNPGSPA 177
Score = 29.9 bits (64), Expect = 3.2
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -3
Query: 813 GXXRPXVXXGXAAGEPXVXXCGPXAPXGRXGPAXXGGAXGXXGAGXLXXXAP 658
G P GEP GP P G GPA GA G G G P
Sbjct: 205 GPGEPGASEQGGPGEP-----GPAGPPGPAGPAGNDGAPGTGGPGPAGPKGP 251
Score = 28.7 bits (61), Expect = 7.4
Identities = 24/81 (29%), Positives = 26/81 (32%)
Frame = -2
Query: 835 GPXVGXPGXXPPLXXPGXSRWGAXCXXXRPXGXAWPXWAGXVXGGXGGXGGGGSXXXRXX 656
GP G PG P PG + P G A P G GG G G+
Sbjct: 159 GP-AGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGP 217
Query: 655 AXXGFXPGGVGGXE*XXGGDG 593
G P G G G DG
Sbjct: 218 GEPG--PAGPPGPAGPAGNDG 236
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 33.9 bits (74), Expect = 0.20
Identities = 20/70 (28%), Positives = 22/70 (31%)
Frame = -2
Query: 883 PVIPGXXGXXGVGFXGGPXVGXPGXXPPLXXPGXSRWGAXCXXXRPXGXAWPXWAGXVXG 704
P PG G G GGP P P P + P G P A G
Sbjct: 200 PGAPGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAPG 259
Query: 703 GXGGXGGGGS 674
G GG G+
Sbjct: 260 ADGNPGGPGT 269
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +2
Query: 680 PAPXXPXAPPHXAGPXRPXGAXGPXXXTXGSPA 778
P P PP AGP P G GP GSPA
Sbjct: 146 PCQPCPGGPPGPAGPAGPPGPPGP-DGNPGSPA 177
Score = 29.9 bits (64), Expect = 3.2
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -3
Query: 813 GXXRPXVXXGXAAGEPXVXXCGPXAPXGRXGPAXXGGAXGXXGAGXLXXXAP 658
G P GEP GP P G GPA GA G G G P
Sbjct: 205 GPGEPGASEQGGPGEP-----GPAGPPGPAGPAGNDGAPGTGGPGPAGPKGP 251
Score = 28.7 bits (61), Expect = 7.4
Identities = 24/81 (29%), Positives = 26/81 (32%)
Frame = -2
Query: 835 GPXVGXPGXXPPLXXPGXSRWGAXCXXXRPXGXAWPXWAGXVXGGXGGXGGGGSXXXRXX 656
GP G PG P PG + P G A P G GG G G+
Sbjct: 159 GP-AGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGP 217
Query: 655 AXXGFXPGGVGGXE*XXGGDG 593
G P G G G DG
Sbjct: 218 GEPG--PAGPPGPAGPAGNDG 236
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 33.9 bits (74), Expect = 0.20
Identities = 28/101 (27%), Positives = 31/101 (30%), Gaps = 4/101 (3%)
Frame = +3
Query: 684 PPXPPXPPXTXPAHXGXAXPXGRXXXXXAPQRLHPGXXRG--GHXXXXXXXXXXXXXXXX 857
PP PP PP P G A GR P P G G
Sbjct: 156 PPGPPGPPGA-PGDPGEAGTPGRPGTDATPGLPGPRGPPGPPGEAGQPGPQGDAGTPAQS 214
Query: 858 XPXNPGITGQAPAXGRSXPRXARHAPXTE--PAXPXPXPXP 974
P PG G+A G + P AP + P P P P
Sbjct: 215 EPLTPGAPGEAGDAGPAGPPGPPGAPGNDGPPGPPGPKGSP 255
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 33.5 bits (73), Expect = 0.26
Identities = 40/133 (30%), Positives = 42/133 (31%), Gaps = 1/133 (0%)
Frame = -2
Query: 973 GXGXGXGXAGSVXGAWRAXRGXXRPXAGACPVIPGXXGXXGV-GFXGGPXVGXPGXXPPL 797
G G G G G G P AG PG G G G G P G G
Sbjct: 105 GYATGGGGGGGGGGCCSCGIGAAGP-AGP----PGADGNPGTDGAAGNP--GQAGADASQ 157
Query: 796 XXPGXSRWGAXCXXXRPXGXAWPXWAGXVXGGXGGXGGGGSXXXRXXAXXGFXPGGVGGX 617
P S + C P G A P G GG G G+ A PG GG
Sbjct: 158 DAPSASDFCFDC----PPGPAGPAGNAGPPGAPGGPGAPGNTPSGGAAGPPGPPGPPGG- 212
Query: 616 E*XXGGDGXXXGP 578
G DG GP
Sbjct: 213 ---PGNDGQPGGP 222
Score = 30.7 bits (66), Expect = 1.8
Identities = 23/88 (26%), Positives = 25/88 (28%), Gaps = 2/88 (2%)
Frame = +2
Query: 566 TSPGGXXXPTVSPXXSLXPXHPPRXEAXXRTGAXXX--RXPAPXXPXAPPHXAGPXRPXG 739
T GG P P P + + GA P P PP AGP P G
Sbjct: 195 TPSGGAAGPPGPPGPPGGPGNDGQPGGPGNPGAPGAVTEVPGQQGPPGPPGPAGPPGPAG 254
Query: 740 AXGPXXXTXGSPAAXPXXTQGRXXPRXP 823
G PA P P P
Sbjct: 255 NAGQAGYAQPGPAGPPGDAGPDGAPGNP 282
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 33.5 bits (73), Expect = 0.26
Identities = 27/98 (27%), Positives = 27/98 (27%)
Frame = -2
Query: 874 PGXXGXXGVGFXGGPXVGXPGXXPPLXXPGXSRWGAXCXXXRPXGXAWPXWAGXVXGGXG 695
P G F GG G PG R G G W G G
Sbjct: 25 PSPWGFRPSPFFGGRSGGWGRPGWGGGGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGN 84
Query: 694 GXGGGGSXXXRXXAXXGFXPGGVGGXE*XXGGDGXXXG 581
G GG G G GG GG GG G G
Sbjct: 85 GGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRG 122
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 33.5 bits (73), Expect = 0.26
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = -2
Query: 718 GXVXGGXGGXGGGGSXXXRXXAXXGFXPGGVGGXE*XXGGDGXXXGP 578
G GG GG GGGG G P G + GGD GP
Sbjct: 487 GGFGGGGGGFGGGGGGFGSGSPFGGAAPSPPSGPDPDFGGDTAAAGP 533
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 33.1 bits (72), Expect = 0.35
Identities = 36/131 (27%), Positives = 43/131 (32%)
Frame = -2
Query: 973 GXGXGXGXAGSVXGAWRAXRGXXRPXAGACPVIPGXXGXXGVGFXGGPXVGXPGXXPPLX 794
G G AG+ G RG R +G G G G G G G G
Sbjct: 37 GWGGSDASAGASAGGTGGGRGGGRGGSGG-----GRGGGSGGGRGGSGGAGAGGSGS--- 88
Query: 793 XPGXSRWGAXCXXXRPXGXAWPXWAGXVXGGXGGXGGGGSXXXRXXAXXGFXPGGVGGXE 614
G WG + G + W G G GG GG R + G GG GG +
Sbjct: 89 --GSGGWGG-----QDGGSSAGGWGGSQGGSQGGSSGGWGGSSRSDSGSG--QGGWGGQQ 139
Query: 613 *XXGGDGXXXG 581
GG+ G
Sbjct: 140 ---GGNSNAGG 147
Score = 32.3 bits (70), Expect = 0.60
Identities = 34/129 (26%), Positives = 40/129 (31%)
Frame = -2
Query: 985 WAXAGXGXGXGXAGSVXGAWRAXRGXXRPXAGACPVIPGXXGXXGVGFXGGPXVGXPGXX 806
W + G G +G G+ R+ G + G G G GG G G
Sbjct: 105 WGGSQGGSQGGSSGGWGGSSRSDSGSGQGGWGG-----QQGGNSNAGGWGGSQGGQNGGG 159
Query: 805 PPLXXPGXSRWGAXCXXXRPXGXAWPXWAGXVXGGXGGXGGGGSXXXRXXAXXGFXPGGV 626
G WG G + W G GG GG GGG G GG
Sbjct: 160 GRGGSGGQGGWGGS-----QDGGSQGGWGGQNGGGQGGNQGGGGG---RGGNQGGEQGGW 211
Query: 625 GGXE*XXGG 599
GG GG
Sbjct: 212 GGQGGSQGG 220
>Z70682-4|CAA94581.1| 299|Caenorhabditis elegans Hypothetical
protein F08G5.4 protein.
Length = 299
Score = 32.7 bits (71), Expect = 0.46
Identities = 23/74 (31%), Positives = 24/74 (32%)
Frame = -2
Query: 895 AGACPVIPGXXGXXGVGFXGGPXVGXPGXXPPLXXPGXSRWGAXCXXXRPXGXAWPXWAG 716
A P PG G G G G P G PG P PG P G A P
Sbjct: 191 APGAPGAPGQDGQRGTGLPGAP--GAPGPQGPSGNPGQDGAAGAPGQAGPAGPAGPDGQP 248
Query: 715 XVXGGXGGXGGGGS 674
G G G G+
Sbjct: 249 GQAGQDGEAGPEGN 262
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 32.3 bits (70), Expect = 0.60
Identities = 28/91 (30%), Positives = 29/91 (31%), Gaps = 1/91 (1%)
Frame = -2
Query: 862 GXXGVGFXGGPXVGXPGXXPPLXXPGXSRWGAXCXXXRPXGX-AWPXWAGXVXGGXGGXG 686
G G GF GGP G PG P G W G W G G G G
Sbjct: 18 GQWGPGF-GGPGFGGPGSGGP-GPRGPGEWNNGGGRGGFGGNNGWNNGGGGFNGNGGFNG 75
Query: 685 GGGSXXXRXXAXXGFXPGGVGGXE*XXGGDG 593
GG G G GG GG+G
Sbjct: 76 GGRGGGRGGNGGFGDNGGLRGGNGGGRGGNG 106
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 31.9 bits (69), Expect = 0.80
Identities = 19/49 (38%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +2
Query: 680 PAPXXPXAPPHXAGPXRPXGAXGPXXXTXGSPAA-XPXXTQGRXXPRXP 823
P P PP GP P G GP GSPAA P G P P
Sbjct: 151 PCQPCPAGPPGPPGPDGPAGPAGPDGEA-GSPAAPSPPGPPGPPGPAGP 198
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 31.9 bits (69), Expect = 0.80
Identities = 19/49 (38%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +2
Query: 680 PAPXXPXAPPHXAGPXRPXGAXGPXXXTXGSPAA-XPXXTQGRXXPRXP 823
P P PP GP P G GP GSPAA P G P P
Sbjct: 150 PCKPCPAGPPGPPGPDGPAGPAGPDGEA-GSPAAPSPPGPPGPSGPAGP 197
Score = 30.7 bits (66), Expect = 1.8
Identities = 29/107 (27%), Positives = 30/107 (28%), Gaps = 6/107 (5%)
Frame = +2
Query: 572 PGGXXXPTVSPXXSLXPXHP-PRXEAXXRTGAXXXRXPAPXXPXAP-----PHXAGPXRP 733
P G SP P P P A P P P P GP P
Sbjct: 170 PAGPDGEAGSPAAPSPPGPPGPSGPAGPAGNDGAAGTPGPDGPAGESTYPEPAAPGPAGP 229
Query: 734 XGAXGPXXXTXGSPAAXPXXTQGRXXPRXPHXWXPXKAHPXXAXXPG 874
G GP SP A P G P P +P A PG
Sbjct: 230 PGPAGPPGPDGASPTAAP-GAAGPPGPPGPAGAPGPDGNPGTAGPPG 275
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 31.9 bits (69), Expect = 0.80
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +2
Query: 680 PAPXXPXAPPHXAGPXRPXGAXGPXXXTXGSPAAXPXXTQGRXXPRXP 823
P P PP AGP P G GP P T G P P
Sbjct: 134 PCKPCPEGPPGPAGPPGPQGNKGPLGPPGPPGPEGPNGTAGNKGPAGP 181
Score = 28.7 bits (61), Expect = 7.4
Identities = 21/85 (24%), Positives = 24/85 (28%)
Frame = +2
Query: 569 SPGGXXXPTVSPXXSLXPXHPPRXEAXXRTGAXXXRXPAPXXPXAPPHXAGPXRPXGAXG 748
+PG P P P PP + P P P GP P G G
Sbjct: 112 APGLNGNPGRPPKEPCEPITPPPCKPCPEGPPGPAGPPGPQGNKGP---LGPPGPPGPEG 168
Query: 749 PXXXTXGSPAAXPXXTQGRXXPRXP 823
P A P G+ P P
Sbjct: 169 PNGTAGNKGPAGPPGPGGKPGPAGP 193
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 31.5 bits (68), Expect = 1.1
Identities = 30/91 (32%), Positives = 31/91 (34%)
Frame = -2
Query: 901 PXAGACPVIPGXXGXXGVGFXGGPXVGXPGXXPPLXXPGXSRWGAXCXXXRPXGXAWPXW 722
P + PV PG G G GGP G PG PP PG P G P
Sbjct: 270 PPGASAPVAPGMPGAFPPG-QGGP--GMPGSFPP-GAPG------------PGGPGMPGS 313
Query: 721 AGXVXGGXGGXGGGGSXXXRXXAXXGFXPGG 629
G GG GG S G PGG
Sbjct: 314 FAPGAPGPGGPGGYPSGGPGMPGMQGGYPGG 344
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 31.5 bits (68), Expect = 1.1
Identities = 26/85 (30%), Positives = 27/85 (31%)
Frame = -2
Query: 847 GFXGGPXVGXPGXXPPLXXPGXSRWGAXCXXXRPXGXAWPXWAGXVXGGXGGXGGGGSXX 668
G G P G PG P PG G P G A A G G G G
Sbjct: 137 GPAGAP--GAPGPQGPSGAPGQDAVGGGPGPAGPQGPAGDAGAPGQAGAPGHPGAPGQGG 194
Query: 667 XRXXAXXGFXPGGVGGXE*XXGGDG 593
R G P G G + GG G
Sbjct: 195 QRSRGTPG--PSGAPGPQGPAGGPG 217
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 26.2 bits (55), Expect(2) = 1.3
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +3
Query: 594 PSPPXXHSXXXXXXXXXXXXAXXRXXXXPPPPXPPXP 704
P+PP S A PPPP PP P
Sbjct: 533 PAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLP 569
Score = 23.4 bits (48), Expect(2) = 1.3
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +3
Query: 678 PPPPXPPXPPXTXP 719
PPPP PP P P
Sbjct: 576 PPPPPPPPPMLGGP 589
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 31.1 bits (67), Expect = 1.4
Identities = 26/85 (30%), Positives = 27/85 (31%)
Frame = -2
Query: 847 GFXGGPXVGXPGXXPPLXXPGXSRWGAXCXXXRPXGXAWPXWAGXVXGGXGGXGGGGSXX 668
G G P G PG P PG G P G A A G G G G
Sbjct: 137 GPAGAP--GAPGPQGPSGAPGQDAVGEGPGPAGPQGPAGDAGAPGQAGAPGHPGAPGQGG 194
Query: 667 XRXXAXXGFXPGGVGGXE*XXGGDG 593
R G P G G + GG G
Sbjct: 195 QRSRGTPG--PAGAPGPQGPAGGPG 217
>U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protein
10 protein.
Length = 294
Score = 31.1 bits (67), Expect = 1.4
Identities = 25/76 (32%), Positives = 27/76 (35%)
Frame = -2
Query: 901 PXAGACPVIPGXXGXXGVGFXGGPXVGXPGXXPPLXXPGXSRWGAXCXXXRPXGXAWPXW 722
P P PG G G G GGP G PG P G GA +P G A P
Sbjct: 197 PGQDGQPGAPGQDGQRGSGAPGGP--GAPGNAGPAGPAGQD--GAPGQDGQP-GPAGPAG 251
Query: 721 AGXVXGGXGGXGGGGS 674
G G G G+
Sbjct: 252 QDGAPGNAGSDGQPGA 267
>U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protein
144 protein.
Length = 306
Score = 31.1 bits (67), Expect = 1.4
Identities = 25/76 (32%), Positives = 27/76 (35%)
Frame = -2
Query: 901 PXAGACPVIPGXXGXXGVGFXGGPXVGXPGXXPPLXXPGXSRWGAXCXXXRPXGXAWPXW 722
P P PG G G G GGP G PG P G GA +P G A P
Sbjct: 209 PGQDGQPGAPGQDGQRGSGAPGGP--GAPGNAGPAGPAGQD--GAPGQDGQP-GPAGPAG 263
Query: 721 AGXVXGGXGGXGGGGS 674
G G G G+
Sbjct: 264 QDGAPGNAGSDGQPGA 279
>AF047652-1|AAO44912.1| 294|Caenorhabditis elegans Collagen protein
107, isoform b protein.
Length = 294
Score = 31.1 bits (67), Expect = 1.4
Identities = 22/62 (35%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
Frame = -3
Query: 750 GPXAPXGRXGPAXXGGAXGXXGA-GXLXXXAPVRXXASXRGGWXGXSXXXGETVGXXXPP 574
GP P G GPA GA G GA G P A + G G GE G P
Sbjct: 205 GPAGPEGPAGPAGQDGAPGQDGAPGNAGSEGPA--GAPGKDGEAGAPGQDGEAGGEGIPG 262
Query: 573 GD 568
D
Sbjct: 263 QD 264
>Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical
protein F15A2.1 protein.
Length = 291
Score = 30.7 bits (66), Expect = 1.8
Identities = 21/69 (30%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Frame = -3
Query: 774 GEPX-VXXCGPXAPXGRXGPAXXGGAXGXXGAGXLXXXAPVRXXASXRGGWXGXSXXXGE 598
G+P V CGP P G G GA G G G P G G G+
Sbjct: 218 GKPGDVGPCGPEGPKGAPGTPGKNGAPGDRGFGG-QPGVPGEPGEDGTPGEPGADGAPGD 276
Query: 597 TVGXXXPPG 571
G PG
Sbjct: 277 DAGYCACPG 285
Score = 28.7 bits (61), Expect = 7.4
Identities = 26/83 (31%), Positives = 27/83 (32%), Gaps = 2/83 (2%)
Frame = -2
Query: 835 GPXVGXPGXXPPLXXPGXSRWGAXCXXXRPXGXAWPXWAGXVXGGXGGXGGGGSXXXRXX 656
GP G PG P PG + P G A P G G G G R
Sbjct: 155 GPD-GEPGVRGPNGPPGPNGHPGQPGRPGPAGPAGPEGKDGPVGPHGPAGPAGPRGTRHS 213
Query: 655 AXXGFXPGGVG--GXE*XXGGDG 593
A PG VG G E G G
Sbjct: 214 AGVPGKPGDVGPCGPEGPKGAPG 236
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 30.3 bits (65), Expect = 2.4
Identities = 28/97 (28%), Positives = 30/97 (30%), Gaps = 3/97 (3%)
Frame = -2
Query: 904 RPXAGACPVIPGXXGXXGVGFXGG---PXVGXPGXXPPLXXPGXSRWGAXCXXXRPXGXA 734
RP P PG G G GG P G PG P PG S G +P A
Sbjct: 156 RPGPPGPPGRPGSDGQPGRPATGGGAAPRPGPPGPKGPRGAPGNS--GRAGAPGQPGNDA 213
Query: 733 WPXWAGXVXGGXGGXGGGGSXXXRXXAXXGFXPGGVG 623
G G G G + G PG G
Sbjct: 214 HGYGGGVGAPGPAGPRGAPGPAGHPGSSGGGRPGPAG 250
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 30.3 bits (65), Expect = 2.4
Identities = 23/87 (26%), Positives = 27/87 (31%), Gaps = 2/87 (2%)
Frame = +2
Query: 569 SPGGXXXPTV--SPXXSLXPXHPPRXEAXXRTGAXXXRXPAPXXPXAPPHXAGPXRPXGA 742
+PG P +P + P PP+ T P P PP AGP P G
Sbjct: 102 TPGSAGRPGKPGAPGLNGNPGRPPKEPCEPLTPP-----PCKPCPEGPPGPAGPPGPDGN 156
Query: 743 XGPXXXTXGSPAAXPXXTQGRXXPRXP 823
GP P G P P
Sbjct: 157 KGPLGPPGPPGPEGPNGEPGNKGPAGP 183
Score = 28.3 bits (60), Expect = 9.8
Identities = 21/85 (24%), Positives = 24/85 (28%)
Frame = +2
Query: 569 SPGGXXXPTVSPXXSLXPXHPPRXEAXXRTGAXXXRXPAPXXPXAPPHXAGPXRPXGAXG 748
+PG P P P PP + P P P GP P G G
Sbjct: 114 APGLNGNPGRPPKEPCEPLTPPPCKPCPEGPPGPAGPPGPDGNKGP---LGPPGPPGPEG 170
Query: 749 PXXXTXGSPAAXPXXTQGRXXPRXP 823
P A P G+ P P
Sbjct: 171 PNGEPGNKGPAGPPGPGGKPGPAGP 195
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 25.4 bits (53), Expect(2) = 2.8
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 681 PPPXPPXPPXTXPA 722
PPP PP PP T A
Sbjct: 84 PPPPPPPPPPTLKA 97
Score = 23.0 bits (47), Expect(2) = 2.8
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 678 PPPPXPPXP 704
PPPP PP P
Sbjct: 67 PPPPPPPPP 75
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 29.9 bits (64), Expect = 3.2
Identities = 21/72 (29%), Positives = 21/72 (29%), Gaps = 3/72 (4%)
Frame = +2
Query: 569 SPG--GXXXPTVSPXXSLXPXHPPRXEAXXRTGAXXXRXPAPXXPXAPPHXAGP-XRPXG 739
SPG G P P P P G P P P PP GP P G
Sbjct: 132 SPGEAGGAGPPGPPGPDGNPGAPGNDGEAGSPGTRSISSPGPAGPAGPPGPPGPDGAPGG 191
Query: 740 AXGPXXXTXGSP 775
GP P
Sbjct: 192 GSGPGPAGPAGP 203
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.6 protein.
Length = 304
Score = 29.9 bits (64), Expect = 3.2
Identities = 29/110 (26%), Positives = 33/110 (30%), Gaps = 1/110 (0%)
Frame = -2
Query: 904 RPXAGAC-PVIPGXXGXXGVGFXGGPXVGXPGXXPPLXXPGXSRWGAXCXXXRPXGXAWP 728
RP A C P+ P G G P G PG PG + G+ P G
Sbjct: 136 RPPAQPCEPITPPPCKPCPQGPAGAP--GAPGPQGDAGAPGQAGQGSGAGAPGPAGPKGA 193
Query: 727 XWAGXVXGGXGGXGGGGSXXXRXXAXXGFXPGGVGGXE*XXGGDGXXXGP 578
A G G G GS + G G G G GP
Sbjct: 194 PGAPGNPGQAGAPGQPGSDAQSESSPGAPGQAGPQGPPGPAGSPGAPGGP 243
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.5 protein.
Length = 304
Score = 29.9 bits (64), Expect = 3.2
Identities = 29/110 (26%), Positives = 33/110 (30%), Gaps = 1/110 (0%)
Frame = -2
Query: 904 RPXAGAC-PVIPGXXGXXGVGFXGGPXVGXPGXXPPLXXPGXSRWGAXCXXXRPXGXAWP 728
RP A C P+ P G G P G PG PG + G+ P G
Sbjct: 136 RPPAQPCEPITPPPCKPCPQGPAGAP--GAPGPQGDAGAPGQAGQGSGAGAPGPAGPKGA 193
Query: 727 XWAGXVXGGXGGXGGGGSXXXRXXAXXGFXPGGVGGXE*XXGGDGXXXGP 578
A G G G GS + G G G G GP
Sbjct: 194 PGAPGNPGQAGAPGQPGSDAQSESSPGAPGQAGPQGPPGPAGSPGAPGGP 243
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.1 protein.
Length = 304
Score = 29.9 bits (64), Expect = 3.2
Identities = 29/110 (26%), Positives = 33/110 (30%), Gaps = 1/110 (0%)
Frame = -2
Query: 904 RPXAGAC-PVIPGXXGXXGVGFXGGPXVGXPGXXPPLXXPGXSRWGAXCXXXRPXGXAWP 728
RP A C P+ P G G P G PG PG + G+ P G
Sbjct: 136 RPPAQPCEPITPPPCKPCPQGPAGAP--GAPGPQGDAGAPGQAGQGSGAGAPGPAGPKGA 193
Query: 727 XWAGXVXGGXGGXGGGGSXXXRXXAXXGFXPGGVGGXE*XXGGDGXXXGP 578
A G G G GS + G G G G GP
Sbjct: 194 PGAPGNPGQAGAPGQPGSDAQSESSPGAPGQAGPQGPPGPAGSPGAPGGP 243
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 29.9 bits (64), Expect = 3.2
Identities = 21/72 (29%), Positives = 21/72 (29%), Gaps = 3/72 (4%)
Frame = +2
Query: 569 SPG--GXXXPTVSPXXSLXPXHPPRXEAXXRTGAXXXRXPAPXXPXAPPHXAGP-XRPXG 739
SPG G P P P P G P P P PP GP P G
Sbjct: 132 SPGEAGGAGPPGPPGPDGNPGAPGNDGEAGSPGTRSISSPGPAGPAGPPGPPGPDGAPGG 191
Query: 740 AXGPXXXTXGSP 775
GP P
Sbjct: 192 GSGPGPAGPAGP 203
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 29.9 bits (64), Expect = 3.2
Identities = 21/75 (28%), Positives = 22/75 (29%), Gaps = 3/75 (4%)
Frame = +2
Query: 572 PGGXXXPTVSPXXSLXPXHPPRXEAXXRTGAXXXRXPAPXXPXAPPHXAGPXRPXG---A 742
P G P P P P + A P P P P AGP G A
Sbjct: 199 PAGPPGPAGPPGNDGQPGQPGGPGQDGASSAGGEAGPGPAGPPGPAGPAGPDGQSGSGSA 258
Query: 743 XGPXXXTXGSPAAXP 787
GP PA P
Sbjct: 259 GGPGPKGPPGPAGQP 273
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.9 bits (64), Expect = 3.2
Identities = 29/97 (29%), Positives = 31/97 (31%), Gaps = 5/97 (5%)
Frame = -2
Query: 853 GVGFXGGPXVGXPGXXPPLXXP-GXSRWGAXCXXXRPX----GXAWPXWAGXVXGGXGGX 689
G GGP G PG PP P + G P G P GG G
Sbjct: 120 GGSMFGGP--GGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGH 177
Query: 688 GGGGSXXXRXXAXXGFXPGGVGGXE*XXGGDGXXXGP 578
GG G GG+GG GG G GP
Sbjct: 178 GGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGP 214
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.9 bits (64), Expect = 3.2
Identities = 29/97 (29%), Positives = 31/97 (31%), Gaps = 5/97 (5%)
Frame = -2
Query: 853 GVGFXGGPXVGXPGXXPPLXXP-GXSRWGAXCXXXRPX----GXAWPXWAGXVXGGXGGX 689
G GGP G PG PP P + G P G P GG G
Sbjct: 400 GGSMFGGP--GGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGH 457
Query: 688 GGGGSXXXRXXAXXGFXPGGVGGXE*XXGGDGXXXGP 578
GG G GG+GG GG G GP
Sbjct: 458 GGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGP 494
>AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein.
Length = 139
Score = 29.9 bits (64), Expect = 3.2
Identities = 31/98 (31%), Positives = 35/98 (35%)
Frame = -2
Query: 871 GXXGXXGVGFXGGPXVGXPGXXPPLXXPGXSRWGAXCXXXRPXGXAWPXWAGXVXGGXGG 692
G G G GGP +G PG L PG G A+ + GG GG
Sbjct: 35 GSYGTVGGAGLGGPGIGGPG----LGGPGIGGPGLGGPGVGGGPGAFGPYGRYGGGGYGG 90
Query: 691 XGGGGSXXXRXXAXXGFXPGGVGGXE*XXGGDGXXXGP 578
G G R G+ GG GG GG G GP
Sbjct: 91 YGRYG----RYGRYGGY--GGYGG----YGGPGYGGGP 118
>AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical
protein F46E10.2 protein.
Length = 139
Score = 29.9 bits (64), Expect = 3.2
Identities = 31/98 (31%), Positives = 35/98 (35%)
Frame = -2
Query: 871 GXXGXXGVGFXGGPXVGXPGXXPPLXXPGXSRWGAXCXXXRPXGXAWPXWAGXVXGGXGG 692
G G G GGP +G PG L PG G A+ + GG GG
Sbjct: 35 GSYGTVGGAGLGGPGIGGPG----LGGPGIGGPGLGGPGVGGGPGAFGPYGRYGGGGYGG 90
Query: 691 XGGGGSXXXRXXAXXGFXPGGVGGXE*XXGGDGXXXGP 578
G G R G+ GG GG GG G GP
Sbjct: 91 YGRYG----RYGRYGGY--GGYGG----YGGPGYGGGP 118
>AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen protein
102 protein.
Length = 460
Score = 29.9 bits (64), Expect = 3.2
Identities = 16/32 (50%), Positives = 16/32 (50%)
Frame = -3
Query: 777 AGEPXVXXCGPXAPXGRXGPAXXGGAXGXXGA 682
AGEP GP P G GPA GA G GA
Sbjct: 140 AGEPGPP--GPEGPAGPAGPAGNAGADGEAGA 169
>AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 28 protein.
Length = 494
Score = 29.9 bits (64), Expect = 3.2
Identities = 17/36 (47%), Positives = 17/36 (47%)
Frame = -2
Query: 703 GXGGXGGGGSXXXRXXAXXGFXPGGVGGXE*XXGGD 596
G GG GGGGS GF P G GG GGD
Sbjct: 456 GRGGGGGGGSHGFHNF--HGFNPFGGGGGGGRGGGD 489
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 29.5 bits (63), Expect = 4.3
Identities = 25/93 (26%), Positives = 27/93 (29%), Gaps = 1/93 (1%)
Frame = +2
Query: 572 PGGXXXPTVSPXXSLXPXHPPRXEAXXRTGAXXXRXPAPXXPXAPPHXAGP-XRPXGAXG 748
P G P SP P P R + P P P PP AGP +P G
Sbjct: 190 PKGPPGPPGSPGA---PGEPGRPGDDAPSEPLIPGEPGPQGPPGPPGQAGPDGQPGAPGG 246
Query: 749 PXXXTXGSPAAXPXXTQGRXXPRXPHXWXPXKA 847
P P P P P P A
Sbjct: 247 PGTPGSKGPPGNPGAPGADGKPGAPGQAGPAGA 279
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 29.5 bits (63), Expect = 4.3
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 678 PPPPXPPXPPXTXPAHXGXAXP 743
PPPP PP PP P A P
Sbjct: 2 PPPPPPPPPPPPPPPPAASAPP 23
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 29.5 bits (63), Expect = 4.3
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 678 PPPPXPPXPPXTXPAHXGXAXP 743
PPPP PP PP P A P
Sbjct: 2 PPPPPPPPPPPPPPPPAASAPP 23
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 29.5 bits (63), Expect = 4.3
Identities = 26/90 (28%), Positives = 30/90 (33%)
Frame = -2
Query: 847 GFXGGPXVGXPGXXPPLXXPGXSRWGAXCXXXRPXGXAWPXWAGXVXGGXGGXGGGGSXX 668
G+ GG G G P G +G P G + G GG G GGGG
Sbjct: 218 GYNGGGG-GGGGWGGPAQRGGPGAYGG------PGGGGQGGYGGDYGGGWGQQGGGGQGG 270
Query: 667 XRXXAXXGFXPGGVGGXE*XXGGDGXXXGP 578
GG G + GG G GP
Sbjct: 271 WGGPQQ---QQGGGGWGQQGGGGQGGWGGP 297
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 29.5 bits (63), Expect = 4.3
Identities = 26/90 (28%), Positives = 30/90 (33%)
Frame = -2
Query: 847 GFXGGPXVGXPGXXPPLXXPGXSRWGAXCXXXRPXGXAWPXWAGXVXGGXGGXGGGGSXX 668
G+ GG G G P G +G P G + G GG G GGGG
Sbjct: 180 GYNGGGG-GGGGWGGPAQRGGPGAYGG------PGGGGQGGYGGDYGGGWGQQGGGGQGG 232
Query: 667 XRXXAXXGFXPGGVGGXE*XXGGDGXXXGP 578
GG G + GG G GP
Sbjct: 233 WGGPQQ---QQGGGGWGQQGGGGQGGWGGP 259
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 29.5 bits (63), Expect = 4.3
Identities = 26/90 (28%), Positives = 30/90 (33%)
Frame = -2
Query: 847 GFXGGPXVGXPGXXPPLXXPGXSRWGAXCXXXRPXGXAWPXWAGXVXGGXGGXGGGGSXX 668
G+ GG G G P G +G P G + G GG G GGGG
Sbjct: 218 GYNGGGG-GGGGWGGPAQRGGPGAYGG------PGGGGQGGYGGDYGGGWGQQGGGGQGG 270
Query: 667 XRXXAXXGFXPGGVGGXE*XXGGDGXXXGP 578
GG G + GG G GP
Sbjct: 271 WGGPQQ---QQGGGGWGQQGGGGQGGWGGP 297
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 29.5 bits (63), Expect = 4.3
Identities = 32/112 (28%), Positives = 35/112 (31%), Gaps = 6/112 (5%)
Frame = +2
Query: 572 PGGXXXPTVSPXXSLXPXHPPRXEAXXRTGAXXXRXPAPXXPX----APPHXAGPXRPXG 739
P G P P HP + G+ PA P P GP P G
Sbjct: 90 PAGPPGPPGQPGAPGEQGHPG---LAGQPGSGARINPATGRPGFCITCPAGAPGPAGPPG 146
Query: 740 AXGPXXXTXGSPAAXPXXTQGR--XXPRXPHXWXPXKAHPXXAXXPGNHXAG 889
A GP G P A P + GR PR P P PGN G
Sbjct: 147 APGP-KGNNGQPGA-PAQSGGRGPPGPRGPAGDAGSPGQPGHPGSPGNPGRG 196
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 29.1 bits (62), Expect = 5.6
Identities = 28/96 (29%), Positives = 30/96 (31%), Gaps = 5/96 (5%)
Frame = -2
Query: 847 GFXGGPXVGXPGXXPPLXXPGXSRWGAXCXXXRPXGXAWPXWAGXVXGGXGGXGGGGSXX 668
G G P G PG P PG G P G A + G G G G
Sbjct: 142 GPAGAP--GQPGPKGPNGNPGAPAQGGGQGPPGPPGPAGSAGSPGQAGAPGNPGSPGKSG 199
Query: 667 XRXXAXXGFXPGGVGGXE*XXG-----GDGXXXGPA 575
R G P G G + G G G GPA
Sbjct: 200 QRGRGLPG--PSGAPGSQGPPGAPGQPGSGNAPGPA 233
Score = 28.7 bits (61), Expect = 7.4
Identities = 29/98 (29%), Positives = 31/98 (31%)
Frame = -2
Query: 967 GXGXGXAGSVXGAWRAXRGXXRPXAGACPVIPGXXGXXGVGFXGGPXVGXPGXXPPLXXP 788
G G G G A A + A P PG G G G G G PG P P
Sbjct: 165 GGGQGPPGPPGPAGSAG-SPGQAGAPGNPGSPGKSGQRGRGLPGPS--GAPGSQGPPGAP 221
Query: 787 GXSRWGAXCXXXRPXGXAWPXWAGXVXGGXGGXGGGGS 674
G G P G A P G G G G+
Sbjct: 222 GQPGSGNAPGPAGPPGPAGPNGQPGHPGQDGQPGAPGN 259
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical
protein C15A11.1 protein.
Length = 303
Score = 29.1 bits (62), Expect = 5.6
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Frame = +2
Query: 674 RXPA-PXXPXAPPHXAGPXRPXGAXGPXXXTXGSPAAXPXXTQGRXXP 814
+ PA P P P AGP P GA G G A P G P
Sbjct: 111 KCPAGPPGPPGPDGNAGPEGPSGAPGADGDAAGPGEAGPAGPAGPPGP 158
>L11247-3|AAA28008.1| 278|Caenorhabditis elegans Collagen protein
91 protein.
Length = 278
Score = 29.1 bits (62), Expect = 5.6
Identities = 29/100 (29%), Positives = 30/100 (30%)
Frame = -2
Query: 892 GACPVIPGXXGXXGVGFXGGPXVGXPGXXPPLXXPGXSRWGAXCXXXRPXGXAWPXWAGX 713
GAC P G G P G PG P PG G P G A A
Sbjct: 129 GACIQCPAGEA----GPAGAP--GAPGPAGPDGQPGADGQGGAPGPAGPEGPAGDAGAPG 182
Query: 712 VXGGXGGXGGGGSXXXRXXAXXGFXPGGVGGXE*XXGGDG 593
G G G G R G G G + G DG
Sbjct: 183 APGAPGNDGQPGQNGQRSTGTPG--AAGAPGPQGPVGSDG 220
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 29.1 bits (62), Expect = 5.6
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +3
Query: 678 PPPPXPPXPPXTXPAHXGXAXPXGR 752
PPPP PP P P + P GR
Sbjct: 142 PPPPPPPPPAPEAPTQCCGSQPYGR 166
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 29.1 bits (62), Expect = 5.6
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +2
Query: 680 PAPXXPXAPPHXAGPXRPXGAXGPXXXTXGSPAAXPXXTQG 802
P P P P AGP P GA G G A P G
Sbjct: 177 PGPAGPAGGPGPAGPPGPAGADGNTPSGGGEGPAGPPGPPG 217
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 29.1 bits (62), Expect = 5.6
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +2
Query: 686 PXXPXAPPHXAGPXRPXGAXGPXXXTXGSPAAXPXXTQGRXXP 814
P P P AGP P GA GP G P G P
Sbjct: 169 PPGPPGPDGNAGPAGPAGAAGPDGEGAGYAEPGPAGPAGPPGP 211
Score = 29.1 bits (62), Expect = 5.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 750 GPXAPXGRXGPAXXGGAXGXXGAG 679
GP P G GPA GA G G G
Sbjct: 171 GPPGPDGNAGPAGPAGAAGPDGEG 194
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 28.7 bits (61), Expect = 7.4
Identities = 19/61 (31%), Positives = 23/61 (37%), Gaps = 1/61 (1%)
Frame = +2
Query: 602 PXXSLXPXHPP-RXEAXXRTGAXXXRXPAPXXPXAPPHXAGPXRPXGAXGPXXXTXGSPA 778
P + P PP + A G+ PA P PP AG P G G G+P
Sbjct: 175 PKGPIGPPGPPGQAGAPGEPGSPAKSEPAVPGPPGPPGQAGQQGPPGPPG-SNGIDGAPG 233
Query: 779 A 781
A
Sbjct: 234 A 234
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 28.7 bits (61), Expect = 7.4
Identities = 25/88 (28%), Positives = 27/88 (30%), Gaps = 5/88 (5%)
Frame = -2
Query: 823 GXPGXXPPLXXPGXSRWGAXCXXXRPXGXAWPXWAGXVXGGXGGXGGGGSXXXRXXAXXG 644
G PG P PG G P G A + G G G G R G
Sbjct: 148 GQPGPKGPNGNPGAPAQGGGQGPPGPPGPAGSAGSPGQAGAPGNPGSPGKSGQRGRGLPG 207
Query: 643 FXPGGVGGXE*XXG-----GDGXXXGPA 575
P G G + G G G GPA
Sbjct: 208 --PSGAPGPQGPPGAPGQPGSGNAPGPA 233
Score = 28.7 bits (61), Expect = 7.4
Identities = 29/98 (29%), Positives = 31/98 (31%)
Frame = -2
Query: 967 GXGXGXAGSVXGAWRAXRGXXRPXAGACPVIPGXXGXXGVGFXGGPXVGXPGXXPPLXXP 788
G G G G A A + A P PG G G G G G PG P P
Sbjct: 165 GGGQGPPGPPGPAGSAG-SPGQAGAPGNPGSPGKSGQRGRGLPGPS--GAPGPQGPPGAP 221
Query: 787 GXSRWGAXCXXXRPXGXAWPXWAGXVXGGXGGXGGGGS 674
G G P G A P G G G G+
Sbjct: 222 GQPGSGNAPGPAGPPGPAGPNGQPGHPGQDGQPGAPGN 259
>Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical
protein C09G5.4 protein.
Length = 323
Score = 28.7 bits (61), Expect = 7.4
Identities = 25/85 (29%), Positives = 26/85 (30%)
Frame = -2
Query: 847 GFXGGPXVGXPGXXPPLXXPGXSRWGAXCXXXRPXGXAWPXWAGXVXGGXGGXGGGGSXX 668
G G P G PG P PG G P G A A G G G G
Sbjct: 141 GPAGAP--GAPGPQGPNGQPGHPGQGGSQGPAGPRGPAGDAGAPGQVGAPGNPGQAGRGG 198
Query: 667 XRXXAXXGFXPGGVGGXE*XXGGDG 593
R G P G G + G G
Sbjct: 199 QRSHGLPG--PSGAPGPQGPSGAPG 221
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 28.7 bits (61), Expect = 7.4
Identities = 24/78 (30%), Positives = 27/78 (34%)
Frame = -3
Query: 801 PXVXXGXAAGEPXVXXCGPXAPXGRXGPAXXGGAXGXXGAGXLXXXAPVRXXASXRGGWX 622
P G A G GP G GPA GG G G G P + A GG
Sbjct: 145 PVGPAGPAGGPGPKGPPGPPGGHGEPGPAGRGGPRGPPGPG-----GP-QGEAGEDGG-A 197
Query: 621 GXSXXXGETVGXXXPPGD 568
G G+ PPG+
Sbjct: 198 GNPGTPGQVRSLPSPPGE 215
Score = 28.3 bits (60), Expect = 9.8
Identities = 20/72 (27%), Positives = 21/72 (29%), Gaps = 1/72 (1%)
Frame = +2
Query: 680 PAPXXPXAPPHXAGPXRPXGAXGPXXXT-XGSPAAXPXXTQGRXXPRXPHXWXPXKAHPX 856
P P P PP G P G GP G P G P P + P
Sbjct: 155 PGPKGPPGPPGGHGEPGPAGRGGPRGPPGPGGPQGEAGEDGGAGNPGTPGQVRSLPSPPG 214
Query: 857 XAXXPGNHXAGP 892
PG GP
Sbjct: 215 EPGQPG-EPGGP 225
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 28.7 bits (61), Expect = 7.4
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -2
Query: 712 VXGGXGGXGGGGSXXXRXXAXXGFXPGGVGGXE*XXGGDG 593
V GG GG GGG G G VGG GG G
Sbjct: 89 VGGGYGGAVGGGGGGGYGGGHGGGHGGAVGGGYGGGGGGG 128
Score = 28.3 bits (60), Expect = 9.8
Identities = 21/64 (32%), Positives = 22/64 (34%)
Frame = -3
Query: 873 PGXXAXXGWAFXGXQXWGXLGXXRPXVXXGXAAGEPXVXXCGPXAPXGRXGPAXXGGAXG 694
PG A G + G G G P G G V GP P GR G G G
Sbjct: 244 PGKNAQGGSSRPGPP--GPAGPPGPPGNNGAPGGGYGVGPPGPPGPSGRPGAPGQPGPDG 301
Query: 693 XXGA 682
GA
Sbjct: 302 QPGA 305
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 28.7 bits (61), Expect = 7.4
Identities = 22/64 (34%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Frame = +2
Query: 704 PPHXAGPXRPXGAXGPXXXTXGSPAAXPXXTQGR--XXPRXPHXWXPXKAHPXXAXXPGN 877
P GP P GA GP G P A P + GR PR P P PGN
Sbjct: 135 PAGAPGPAGPPGAPGP-KGNNGQPGA-PAQSGGRGPPGPRGPAGDAGSPGQPGHPGSPGN 192
Query: 878 HXAG 889
G
Sbjct: 193 PGRG 196
>AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 9 protein.
Length = 315
Score = 28.7 bits (61), Expect = 7.4
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = -3
Query: 750 GPXAPXGRXGPAXXGGAXGXXGAGXLXXXAPVRXXASXRG 631
GP P G+ GP G G G L VR RG
Sbjct: 209 GPTGPPGKVGPRGLSGGKGHDGKPGLGGQPGVRGAVGARG 248
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 28.3 bits (60), Expect = 9.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 678 PPPPXPPXPPXTXPA 722
PPPP PP PP T A
Sbjct: 361 PPPPPPPPPPQTPSA 375
>U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform a
protein.
Length = 329
Score = 28.3 bits (60), Expect = 9.8
Identities = 21/72 (29%), Positives = 24/72 (33%), Gaps = 7/72 (9%)
Frame = +2
Query: 629 PPRXEAXXRTGAXXXRXPAPXXPXAP--PHXAGPXRPXGAXGPXXXTXGSPAAXPXXT-- 796
P R GA P P AP P GP P G GP + P P +
Sbjct: 233 PGRDGMKGAPGAAGRLIPVPGPQGAPGKPGPIGPPGPKGNPGPDGQSYQGPPGPPGDSGT 292
Query: 797 ---QGRXXPRXP 823
+GR P P
Sbjct: 293 PGHEGRAGPNGP 304
>M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein.
Length = 282
Score = 28.3 bits (60), Expect = 9.8
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = -2
Query: 904 RPXAGACPVIPGXXGXXGVGFXGGPXVGXPGXXPPLXXPG 785
RP A CP PG G G + G G G P PG
Sbjct: 184 RPGAAGCPGPPGPRGEPGTEYRPG-QAGRAGPPGPRGPPG 222
>M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein.
Length = 329
Score = 28.3 bits (60), Expect = 9.8
Identities = 21/72 (29%), Positives = 24/72 (33%), Gaps = 7/72 (9%)
Frame = +2
Query: 629 PPRXEAXXRTGAXXXRXPAPXXPXAP--PHXAGPXRPXGAXGPXXXTXGSPAAXPXXT-- 796
P R GA P P AP P GP P G GP + P P +
Sbjct: 233 PGRDGMKGAPGARGRLIPVPGPQGAPGKPGPIGPPGPKGNPGPDGQSYQGPPGPPGDSGT 292
Query: 797 ---QGRXXPRXP 823
+GR P P
Sbjct: 293 PGHEGRAGPNGP 304
>AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen protein
101 protein.
Length = 314
Score = 28.3 bits (60), Expect = 9.8
Identities = 21/86 (24%), Positives = 24/86 (27%)
Frame = +2
Query: 620 PXHPPRXEAXXRTGAXXXRXPAPXXPXAPPHXAGPXRPXGAXGPXXXTXGSPAAXPXXTQ 799
P PP + AP P GP P G GP G P
Sbjct: 208 PAGPPGPSGQPGSNGNAGAPGAPGHVVDVPGTPGPAGPPGPAGP-AGAPGQPGQAGHAQP 266
Query: 800 GRXXPRXPHXWXPXKAHPXXAXXPGN 877
G+ P+ P A PGN
Sbjct: 267 GQPGPQGDAGAPGAPGQPGSAGQPGN 292
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,908,055
Number of Sequences: 27780
Number of extensions: 192907
Number of successful extensions: 3081
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2401
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2845728736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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