Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_E20
         (941 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       29   0.081
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   5.3  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    22   9.3  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 28.7 bits (61), Expect = 0.081
 Identities = 15/55 (27%), Positives = 16/55 (29%)
 Frame = +1

Query: 634 PPXGXPPPXGXPXXXXXPSPXXPPPDXXXXPPRXXPXGRPPXGGXLXFRXXPXXG 798
           P  G P P   P           PP+    PP   P G PP          P  G
Sbjct: 16  PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNPSQMMISPASG 70



 Score = 25.8 bits (54), Expect = 0.57
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +1

Query: 490 GXPPPPRXXPXGXGPPGA 543
           G PP P   P   GPPGA
Sbjct: 37  GSPPNPSQGPPPGGPPGA 54



 Score = 24.6 bits (51), Expect = 1.3
 Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
 Frame = +2

Query: 683 PQAPXP-PLPTXXXXPPAXPPXGXPPXGGXXXSAXXPXGGXPXRPP 817
           P +  P P P+    P A P  G PP      S   P GG P  PP
Sbjct: 16  PSSGAPGPQPSPHQSPQA-PQRGSPP----NPSQGPPPGGPPGAPP 56



 Score = 21.8 bits (44), Expect = 9.3
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +2

Query: 203 PPPXGGGXAPPXXXGAXXWXGPPPGG 280
           P P     AP          GPPPGG
Sbjct: 25  PSPHQSPQAPQRGSPPNPSQGPPPGG 50


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 19/83 (22%), Positives = 21/83 (25%), Gaps = 8/83 (9%)
 Frame = +3

Query: 633 APPGXXPPXXXPXXXXXPKPPXPPSR--------PXXXXXXXXXXXXXXXXXXXXXPRXX 788
           A P   P    P     P+PP P  R        P                     P   
Sbjct: 64  AEPKAEPGNNRPIYIPQPRPPHPRLRREAESEAEPGNNRPVYIPQPRPPHPRLRREPEAE 123

Query: 789 PXGXXPXALPLPXPPXXPXXRXP 857
           P    P  +P P PP     R P
Sbjct: 124 PGNNRPVYIPQPRPPHPRLRREP 146


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 9/26 (34%), Positives = 10/26 (38%)
 Frame = -3

Query: 444 RXXXPPPXRPGXRXXXXXPPPRPXPP 367
           R    P  +PG       P PRP  P
Sbjct: 256 RREAKPEAKPGNNRPVYIPQPRPPHP 281


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,902
Number of Sequences: 438
Number of extensions: 5876
Number of successful extensions: 31
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30839445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)