Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_E17
         (887 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024859-11|AAK29981.1|  933|Caenorhabditis elegans Hypothetical...    29   3.4  
AC024859-10|ABA00158.1|  832|Caenorhabditis elegans Hypothetical...    29   3.4  
Z70756-12|CAA94796.2|  180|Caenorhabditis elegans Hypothetical p...    29   4.4  

>AC024859-11|AAK29981.1|  933|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.15a protein.
          Length = 933

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +1

Query: 691 FLPSGSVALSHS-SRCRYLSSV*VVRSKLGCVHEPPVQPDRCALSGTIVLSQPGKXDLSP 867
           F+   S+A+  S  RC+ L+++ V   KL  V +P +Q  +  +        PG   L P
Sbjct: 709 FIRDQSIAVDQSLRRCKALANIMVTMKKLAMVQDPSIQRRKKHVERADSAGAPGSPRLPP 768


>AC024859-10|ABA00158.1|  832|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.15b protein.
          Length = 832

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +1

Query: 691 FLPSGSVALSHS-SRCRYLSSV*VVRSKLGCVHEPPVQPDRCALSGTIVLSQPGKXDLSP 867
           F+   S+A+  S  RC+ L+++ V   KL  V +P +Q  +  +        PG   L P
Sbjct: 608 FIRDQSIAVDQSLRRCKALANIMVTMKKLAMVQDPSIQRRKKHVERADSAGAPGSPRLPP 667


>Z70756-12|CAA94796.2|  180|Caenorhabditis elegans Hypothetical
           protein T06E4.10 protein.
          Length = 180

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 20/75 (26%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
 Frame = +2

Query: 614 YQAFPPGSSLVR-SPVPTLPLTGYCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTN 790
           YQA   G++    +  P      Y P          L A A    +   +FAP+  V   
Sbjct: 30  YQALFGGAAAPAVAAAPAFAAPAYAPALGAPAYAPALAAPAYAPGLAAPAFAPAPVVAAA 89

Query: 791 PPFSPTAAPYPVLSS 835
           P  +P  AP PV+++
Sbjct: 90  PALAPAYAPAPVVAA 104


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,262,377
Number of Sequences: 27780
Number of extensions: 412268
Number of successful extensions: 1154
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1154
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)