Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_E09
         (889 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0805 + 21400345-21400701,21400797-21400975,21401223-214012...    35   0.099
02_03_0032 + 14112354-14112417,14112471-14112549,14114435-141145...    30   2.1  
01_05_0657 + 24034198-24036306                                         30   2.8  
08_02_0021 + 11307795-11308093,11308454-11308556,11309623-113099...    29   6.5  

>08_02_0805 +
           21400345-21400701,21400797-21400975,21401223-21401271,
           21401310-21401390,21401988-21402605
          Length = 427

 Score = 34.7 bits (76), Expect = 0.099
 Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
 Frame = +2

Query: 266 MKLQENLDYTKFSGVWYNVASYASDGRP---IYDCATLDFQEDNLGYTLRETYVNVDAGN 436
           MK+  NLD  ++ G WY +A + S  +P       AT     D     L ET+ +   G+
Sbjct: 1   MKVVRNLDLERYMGRWYEIACFPSRFQPRDGTNTRATYTLAGDGAVKVLNETWTDGRRGH 60

Query: 437 RTQKSYLARVDPTFD-AGNKAQFIV 508
               +Y  R DP  D A  K +F V
Sbjct: 61  IEGTAY--RADPVSDEAKLKVKFYV 83


>02_03_0032 +
           14112354-14112417,14112471-14112549,14114435-14114551,
           14114721-14114802,14115734-14115868,14115948-14116123,
           14116219-14116370,14116433-14117622
          Length = 664

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -1

Query: 163 NVADQMVSHPTR*LSNKTDDLNKDGSS*NGRESDARIQIQ 44
           ++ D+  S+P R LSN T D+N  G + N    D  ++I+
Sbjct: 351 HIEDRSKSYPERNLSNLTADMNNPGKTHNKESLDQALKIK 390


>01_05_0657 + 24034198-24036306
          Length = 702

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 10/48 (20%), Positives = 30/48 (62%)
 Frame = +3

Query: 582 IAYTCKTLKKKTRTHYVFTWILTRTKNKLQGDTQKKVETALSNYLELA 725
           ++++C T++  T TH +  W +  T  +++ + + ++++  +NY ++A
Sbjct: 505 LSWSCTTVR--TTTHTIIAWHIATTLCEVEDEERHRMDSTTTNYKDVA 550


>08_02_0021 +
           11307795-11308093,11308454-11308556,11309623-11309931,
           11310190-11310618
          Length = 379

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -3

Query: 458 PGKTSEFYYPRRHSRTSPVGCSQDCLPGSPGWHNRRLAVHRL 333
           P   +   +PR   R  P GCS   + G+    +RRL   RL
Sbjct: 179 PASAAAASHPRLRCRCEPRGCSSGRIEGAGAASDRRLRCRRL 220


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,963,663
Number of Sequences: 37544
Number of extensions: 447823
Number of successful extensions: 1030
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)