Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_E09
         (889 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        26   0.53 
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        26   0.53 
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        26   0.53 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   4.9  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   6.5  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +2

Query: 323 ASYASDGRPIYDCATLDFQEDNLGYTLRE 409
           A+Y+ D RP YDC TL+  +D+    ++E
Sbjct: 405 AAYSRDVRPKYDC-TLEKSQDDCLKAIKE 432


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +2

Query: 323 ASYASDGRPIYDCATLDFQEDNLGYTLRE 409
           A+Y+ D RP YDC TL+  +D+    ++E
Sbjct: 405 AAYSRDVRPKYDC-TLEKSQDDCLKAIKE 432


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +2

Query: 323 ASYASDGRPIYDCATLDFQEDNLGYTLRE 409
           A+Y+ D RP YDC TL+  +D+    ++E
Sbjct: 405 AAYSRDVRPKYDC-TLEKSQDDCLKAIKE 432


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 165 RTLQIKWSRTPRGNYPIKPTIL 100
           R++Q+ W+    GN PIK  ++
Sbjct: 890 RSVQLSWAAPYDGNSPIKRYVI 911


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -2

Query: 576 IHRNQWTKMKNGNCRTLSPPSWLTI 502
           I +N WT  ++   +T + P++LTI
Sbjct: 489 IKQNTWTVFRDAITQTGTGPAFLTI 513


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,784
Number of Sequences: 438
Number of extensions: 4828
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)