Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_E02
         (868 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0444 + 3141018-3141503,3141967-3142066,3142940-3142980           31   0.90 
02_05_1170 + 34663853-34663928,34664038-34664078,34664317-346643...    31   1.6  
02_05_0052 - 25433204-25434151                                         30   2.8  
03_06_0460 - 34098115-34098622,34098981-34099355,34100939-341011...    29   6.4  
03_01_0300 + 2350232-2352274,2352349-2352669,2352752-2352838,235...    28   8.4  

>06_01_0444 + 3141018-3141503,3141967-3142066,3142940-3142980
          Length = 208

 Score = 31.5 bits (68), Expect = 0.90
 Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
 Frame = +3

Query: 471 DDGRPAYGDGKDKTSPRVSWKLIALWENNKVYFKILNTERNQYLVL-GVGTNWNGDHMAF 647
           DD R      +D+ S   +W +  L  N      + +    +YL       +WN + +  
Sbjct: 24  DDDRSGVSLQQDRASVHAAWAVHILHFNGGDVLMLHSAANGRYLAAYRAEGSWNVERL-- 81

Query: 648 GVNSVDSFRAQWYLQPAKYDNDVL 719
            +N + S    WY   ++Y +DVL
Sbjct: 82  NLNRLPSLTFSWYALGSRYGDDVL 105


>02_05_1170 + 34663853-34663928,34664038-34664078,34664317-34664386,
            34664499-34664647,34664784-34664879,34665406-34665476,
            34665637-34665698,34665778-34665841,34665950-34666034,
            34666129-34666255,34666381-34666454,34666539-34666599,
            34666683-34666771,34666897-34667206,34667763-34667815,
            34668299-34668370,34668648-34668914,34669015-34669047,
            34669163-34669245,34669522-34669594,34669834-34670170,
            34670302-34670633,34670816-34671135,34671261-34671612,
            34671691-34671906
          Length = 1170

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 40/136 (29%), Positives = 56/136 (41%), Gaps = 23/136 (16%)
 Frame = +1

Query: 76   LDAPKXXPAIVILCLFVASLYAADSDVPNDILE------EQLYNSV-VVADYDSAVEKSK 234
            LD P    A ++L  F   L++ DS  P  IL       E   NS   V D   A E S 
Sbjct: 646  LDCPLFRNARIVLDDFEVILHSPDSIAPVGILHPLKFHLEHKPNSFGTVGDSAIAQENSS 705

Query: 235  HLYE----------EKKSEVITNVVNKLIRNNKMNCME------YAYQLWLQGLQGTSSG 366
            +LYE          EKK E ++ V       N   C+       ++   W+Q   GTS G
Sbjct: 706  YLYEVDGAIAHSDVEKKQETLSPVTTVDACTNIDLCISKTGKKLFSIGCWIQDPCGTSEG 765

Query: 367  IVSQLSSDLSSPKTRL 414
            + + L + LS  + +L
Sbjct: 766  LKTDLVAVLSRIENQL 781


>02_05_0052 - 25433204-25434151
          Length = 315

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 824 RLLCRCIPRPCGXPEGLNRPRQCQSLA 744
           R+   C+PRPC  PEG + P +C   A
Sbjct: 43  RIAASCLPRPC--PEGGDDPMECDEAA 67


>03_06_0460 -
           34098115-34098622,34098981-34099355,34100939-34101156,
           34101235-34101297
          Length = 387

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -3

Query: 161 LGTSESAAYRDATKRHRITIAGXXFGASR 75
           +G +++A+Y  +T R  + +AG   GASR
Sbjct: 284 VGAADAASYCGSTSRRMVQVAGEVLGASR 312


>03_01_0300 + 2350232-2352274,2352349-2352669,2352752-2352838,
            2353031-2353708,2353800-2353964,2354139-2354433,
            2354581-2354795,2354885-2355190,2355269-2355332,
            2355426-2355665,2355783-2355886
          Length = 1505

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 12/52 (23%), Positives = 26/52 (50%)
 Frame = +2

Query: 62   GHTQASTLQXXSPL*LFYVFSWHLCMLQIPTSLTTFWRSSFTIASSSPITTV 217
            G   ++T+Q    + +    +W + +L +P ++   W   + IASS  +T +
Sbjct: 1060 GGFASTTIQLLGIVAVMSKVTWQVLILIVPMAVACMWMQRYYIASSRELTRI 1111


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,276,672
Number of Sequences: 37544
Number of extensions: 381824
Number of successful extensions: 1062
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1062
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)