Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_D23
         (876 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97194-7|AAB52450.2|  107|Caenorhabditis elegans Hypothetical pr...    62   7e-10
AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical ...    61   1e-09
Z70752-5|CAA94758.1|  901|Caenorhabditis elegans Hypothetical pr...    31   0.82 
Z70750-16|CAA94750.1|  901|Caenorhabditis elegans Hypothetical p...    31   0.82 
AF106584-6|AAC78220.1|  424|Caenorhabditis elegans Hypothetical ...    31   0.82 
AF022985-14|AAB69975.2|  218|Caenorhabditis elegans Hypothetical...    31   1.4  

>U97194-7|AAB52450.2|  107|Caenorhabditis elegans Hypothetical
           protein C37A2.7 protein.
          Length = 107

 Score = 61.7 bits (143), Expect = 7e-10
 Identities = 28/61 (45%), Positives = 40/61 (65%)
 Frame = +2

Query: 116 LAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVG 295
           LA LGG  +P+A DV K+L + G++ D E    V+  L GK + ++IA G+ KLSS+P G
Sbjct: 9   LATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKVKLSSVPSG 68

Query: 296 G 298
           G
Sbjct: 69  G 69


>AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical
           protein Y62E10A.1 protein.
          Length = 110

 Score = 60.9 bits (141), Expect = 1e-09
 Identities = 39/104 (37%), Positives = 47/104 (45%)
 Frame = +2

Query: 116 LAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVG 295
           LAVLGG   P   D++ ILS+VG++AD E  K V++ L GK VE+LIA G   L S  V 
Sbjct: 9   LAVLGGNANPKVDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELIAEGSAGLVS--VS 66

Query: 296 GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGFGLFD 427
           GG                                   MGFGLFD
Sbjct: 67  GGAAPAAAAAPAAGGAAPAADSKPAKKEEPKEESDDDMGFGLFD 110


>Z70752-5|CAA94758.1|  901|Caenorhabditis elegans Hypothetical
           protein F25B3.1 protein.
          Length = 901

 Score = 31.5 bits (68), Expect = 0.82
 Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +2

Query: 137 TTPAAADVEKILSSVGIEADGEKLKKVITEL-NGKDVEQLI 256
           +TPA+A   +I  + GI    EK+  +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484


>Z70750-16|CAA94750.1|  901|Caenorhabditis elegans Hypothetical
           protein F25B3.1 protein.
          Length = 901

 Score = 31.5 bits (68), Expect = 0.82
 Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +2

Query: 137 TTPAAADVEKILSSVGIEADGEKLKKVITEL-NGKDVEQLI 256
           +TPA+A   +I  + GI    EK+  +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484


>AF106584-6|AAC78220.1|  424|Caenorhabditis elegans Hypothetical
           protein F54A5.1 protein.
          Length = 424

 Score = 31.5 bits (68), Expect = 0.82
 Identities = 20/57 (35%), Positives = 28/57 (49%)
 Frame = -1

Query: 300 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLP 130
           P P       SRP+AI  +TS   S +    +  PS S P+ L +F+ +   GV LP
Sbjct: 340 PSPAVSTFEVSRPSAIISATSSTTSPISIPATIIPSVS-PSALELFAMAQQLGVQLP 395


>AF022985-14|AAB69975.2|  218|Caenorhabditis elegans Hypothetical
           protein T15B7.2 protein.
          Length = 218

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = +2

Query: 35  LKILILSALHVSCQLGLKKCVTWPRIYLAV-LGGKTTPAAADVEKILSSVGI 187
           L+IL  SA+ V   LGL   +TWP++Y +V    K    AA +E I + VG+
Sbjct: 13  LQILGWSAILVKTVLGLANGLTWPQLYESVEFELKIFQTAAILEVIHAIVGL 64


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,909,668
Number of Sequences: 27780
Number of extensions: 208921
Number of successful extensions: 509
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 509
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)