Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_D22
         (898 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132902-1|CAB81996.1|  246|Caenorhabditis elegans Hypothetical ...   263   1e-70
Z81122-11|CAB61031.1|  447|Caenorhabditis elegans Hypothetical p...    29   4.5  
AF114440-1|AAD13294.1|  447|Caenorhabditis elegans delta5-fatty ...    29   4.5  
AF078796-1|AAC95143.1|  447|Caenorhabditis elegans delta 5 fatty...    29   4.5  
AF099919-13|AAC68798.1|  636|Caenorhabditis elegans Hypothetical...    29   6.0  

>AL132902-1|CAB81996.1|  246|Caenorhabditis elegans Hypothetical
           protein Y71A12B.1 protein.
          Length = 246

 Score =  263 bits (644), Expect = 1e-70
 Identities = 126/186 (67%), Positives = 148/186 (79%)
 Frame = +3

Query: 90  MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 269
           M+LN +YPATG QK FEV +E KLR+F+EKRM  EV  D LGDEWKGYV+R+ GGNDKQG
Sbjct: 1   MRLNFAYPATGLQKSFEVDEEKKLRLFFEKRMSQEVAIDALGDEWKGYVVRIGGGNDKQG 60

Query: 270 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 449
           FPMKQG+LTN RVRLL+ KG SCYR R++GERKRKSVRGCIVDAN+S L+LVIV+KG  E
Sbjct: 61  FPMKQGILTNGRVRLLLKKGQSCYRERKNGERKRKSVRGCIVDANMSALSLVIVKKGDGE 120

Query: 450 IPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKI 629
           I GLTD  +PR+LGPKRASKIRKLFNL+K DDV +YV+       +G      +  APKI
Sbjct: 121 IEGLTDSVLPRKLGPKRASKIRKLFNLTKHDDVTKYVITHDKTFPDG----VTKTIAPKI 176

Query: 630 QRLVTP 647
           QRL+TP
Sbjct: 177 QRLITP 182


>Z81122-11|CAB61031.1|  447|Caenorhabditis elegans Hypothetical
           protein T13F2.1 protein.
          Length = 447

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = -2

Query: 792 RLIFFLATHX--GFLLSLCKQFSIFSLRGLALSETLL 688
           R++FFL +H   GFLLS    F+ +S+   ALS  ++
Sbjct: 318 RIMFFLVSHLVGGFLLSHVVTFNHYSVEKFALSSNIM 354


>AF114440-1|AAD13294.1|  447|Caenorhabditis elegans delta5-fatty
           acid desaturase protein.
          Length = 447

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = -2

Query: 792 RLIFFLATHX--GFLLSLCKQFSIFSLRGLALSETLL 688
           R++FFL +H   GFLLS    F+ +S+   ALS  ++
Sbjct: 318 RIMFFLVSHLVGGFLLSHVVTFNHYSVEKFALSSNIM 354


>AF078796-1|AAC95143.1|  447|Caenorhabditis elegans delta 5 fatty
           acid desaturase protein.
          Length = 447

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = -2

Query: 792 RLIFFLATHX--GFLLSLCKQFSIFSLRGLALSETLL 688
           R++FFL +H   GFLLS    F+ +S+   ALS  ++
Sbjct: 318 RIMFFLVSHLVGGFLLSHVVTFNHYSVEKFALSSNIM 354


>AF099919-13|AAC68798.1|  636|Caenorhabditis elegans Hypothetical
           protein F40G9.1 protein.
          Length = 636

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +3

Query: 108 YPATGCQKLFEVVDEHK---LRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQ 266
           Y   G  ++FE+  E K    RIF EK +   +   ++ ++     L++ G NDK+
Sbjct: 6   YLHVGLNRIFEIAKEKKNGKFRIFLEKNVKNVIFLQEIFEKSLFLCLKINGSNDKK 61


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,591,166
Number of Sequences: 27780
Number of extensions: 381494
Number of successful extensions: 1007
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)