Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_D19
(874 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 29 0.65
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.65
SPBP23A10.13 |orc4|orp4|origin recognition complex subunit Orc4|... 29 1.1
SPBC21B10.07 |||glycosyl hydrolase family 16|Schizosaccharomyces... 28 2.0
SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein |S... 27 2.6
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 3.5
SPBC1198.03c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 3.5
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 27 3.5
SPBC1604.21c |ptr3|uba1, SPBC211.09|ubiquitin activating enzyme ... 27 4.6
SPBP19A11.01 |||glycine decarboxylase complex subunit H|Schizosa... 27 4.6
SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyce... 27 4.6
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 6.1
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 6.1
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 26 6.1
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 26 8.1
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 29.5 bits (63), Expect = 0.65
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 582 FYSWCYFRALCVYWITGFIYETFN 511
++SWCY+ A V W GF + N
Sbjct: 800 YHSWCYYVAALVLWSIGFALDEEN 823
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.5 bits (63), Expect = 0.65
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +1
Query: 541 PVNTEGSEITPGVEFTSTSLNPESPQSIPNQPPDSLPAKPPS 666
P+ TP V T SL P +P S+P P SLP P+
Sbjct: 405 PLGNASRTSTPPVP-TPPSLPPSAPPSLPPSAPPSLPMGAPA 445
>SPBP23A10.13 |orc4|orp4|origin recognition complex subunit
Orc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 972
Score = 28.7 bits (61), Expect = 1.1
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 547 NTEGSEITPGVEFTSTSLNPESPQSIPNQPPDSLPAKPPSEGYP 678
N E ITPG+ +S + +PQS + P P P S+ P
Sbjct: 438 NAEIRNITPGLTDSSVHSSSATPQSESSSPNSVSPLLPSSDRLP 481
>SPBC21B10.07 |||glycosyl hydrolase family 16|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 419
Score = 27.9 bits (59), Expect = 2.0
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +1
Query: 196 VWVLLFKIVLCYEAPPATLEAIHPKGLRVSVPDEGFSLFAFHGKLNEEMEGLEA--GHWS 369
+W+L+F + L L + G R +V D S A L +E +G G
Sbjct: 89 IWILIFIVALICSVLIGVLGGV--LGHRTAVRDRHPSYKAKTYSLVKEYKGTTFFDGFDF 146
Query: 370 RDITKPKNGRWIFRDRNAALKVG 438
+IT P +G + DRN++ K+G
Sbjct: 147 MNITDPTHGFVQYLDRNSSAKLG 169
>SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 971
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 777 FPFVYWYIELIFEKQLPFAY 718
FP +YWYI+ F K +P AY
Sbjct: 174 FPLIYWYIQHKF-KHIPGAY 192
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.1 bits (57), Expect = 3.5
Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = +1
Query: 535 GNPVNTEGSEITPGVEFTSTSLNPESPQSIPNQP-PDSLPAKPPSEGYPCELSLSTVSVP 711
G P N + P + P++P + N P P S PA PP+ ++ V VP
Sbjct: 1437 GAPSNHAPQVVPPAPMHAVAPVQPKAPGMVTNAPAPSSAPA-PPAPVSQLPPAVPNVPVP 1495
Query: 712 GFV 720
+
Sbjct: 1496 SMI 1498
>SPBC1198.03c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 249
Score = 27.1 bits (57), Expect = 3.5
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 112 VNILHVVFNQTYRTK*NTTSVTRMYKTCV 198
V++ H V N+T++TK NT + + + V
Sbjct: 47 VHVFHGVVNRTFKTKGNTVGLPKSFSKAV 75
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 27.1 bits (57), Expect = 3.5
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +1
Query: 520 FVDEAGNPVNTE-GSEITPGVEFTSTSLNPESPQSIPNQPPDSLPAKPPSEG 672
FVD TE SE P V+F SL E+ Q+I + +PPS G
Sbjct: 237 FVDVMSQASGTEVDSERFPSVDFEDPSLLMENQQNITGTGSFADYLQPPSSG 288
>SPBC1604.21c |ptr3|uba1, SPBC211.09|ubiquitin activating enzyme
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1012
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 114 KHFTCCVQSNLPNQIEHNI 170
K F C N PN+IEH I
Sbjct: 588 KSFPICTLKNFPNRIEHTI 606
>SPBP19A11.01 |||glycine decarboxylase complex subunit
H|Schizosaccharomyces pombe|chr 2|||Manual
Length = 169
Score = 26.6 bits (56), Expect = 4.6
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 559 SEITPGVEFTSTSLNPESPQSIPNQPPDSLPAKPPSEGYPCELSLST 699
S++ V T TS+N S PD + + P EG+ C++ LS+
Sbjct: 104 SDVYSPVSGTVTSINESLGDS-----PDKVSSSPEEEGWICKIKLSS 145
>SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 536
Score = 26.6 bits (56), Expect = 4.6
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 613 PQSIPNQPPD-SLPAKPPSEGYPCELSLSTVSVPGFVCKGQLLFEDQ 750
P+++P +P SLP K P + + S + G CK ++ D+
Sbjct: 423 PEALPREPLSFSLPEKAPEKATNISIPESAPTTAGSTCKVKVRLGDE 469
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.2 bits (55), Expect = 6.1
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = +1
Query: 592 TSLNPESPQSIPNQPPDSLPAKPPSEGYPCELSLSTVSVPGFVCKGQLLFEDQFNIPIHK 771
TS +P+ P P+ P S+P PPS Y + + V G+ F+D +PI
Sbjct: 232 TSESPKFPNRGPSIPSASVPPVPPS-SYVLQQRPNRVD-----DHGRFHFKDDSYLPIPH 285
Query: 772 GKIWVPEV 795
+ VP+V
Sbjct: 286 PFLGVPKV 293
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.2 bits (55), Expect = 6.1
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 541 PVNTEGSEITPGVEFTSTSLNPESPQSIPNQPPDSLPAKPPS 666
P ++ S I P V T++ +P + S P D P PPS
Sbjct: 814 PKTSQASSILPTVPRTTSYTSPYATTSSHITPADVHPLPPPS 855
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 26.2 bits (55), Expect = 6.1
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 169 SVTRMYKTCVWVLLFKIVLCYEAPPATLEAIHPKGLRVSVPDEGFSLF 312
S+TR C+ +L K V+ + P + HP +V V D G S F
Sbjct: 804 SITRQLIQCLTLLNEKHVIHCDLKPENILLCHPFKSQVKVIDFGSSCF 851
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 601 NPESPQSIPNQPPDSLPAKPPSEGY 675
NP P P P S P PP GY
Sbjct: 8 NPPPPPPPPGFEPPSQPPPPPPPGY 32
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,808,084
Number of Sequences: 5004
Number of extensions: 88026
Number of successful extensions: 296
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 292
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 436477420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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