Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_D19
(874 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1160 - 24430240-24431268 33 0.23
06_02_0046 + 10928708-10928798,10929997-10930077,10930567-109306... 33 0.30
05_03_0107 - 8470386-8470559,8470694-8471737 31 0.91
01_07_0360 + 43056226-43057566 31 1.2
08_02_0181 + 13923658-13923661,13925518-13925681,13925879-139259... 30 2.8
01_06_0146 + 26969011-26969995,26970878-26970930 30 2.8
10_08_0435 + 17905728-17905901,17906608-17906931,17907205-179073... 29 3.7
03_03_0278 - 16126803-16129049 29 3.7
03_01_0414 + 3183292-3183735,3184547-3184969,3185435-3185535,318... 29 3.7
01_01_0728 + 5684699-5685025 29 3.7
01_01_0103 - 773727-774737,774797-774813,774852-775078,777465-77... 29 4.9
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 6.4
11_05_0103 - 19083663-19083856,19083962-19084169,19084239-190843... 28 8.5
09_04_0574 + 18645363-18645870,18645995-18646491,18646631-186466... 28 8.5
08_01_0381 - 3382316-3382459,3382872-3382907,3383323-3383429,338... 28 8.5
06_03_0649 + 23138442-23138842,23139576-23139849,23139929-231405... 28 8.5
06_03_0310 - 19453047-19453160,19453240-19453338,19453441-194535... 28 8.5
05_04_0124 + 18232961-18236636,18236810-18237288,18237549-182376... 28 8.5
05_04_0122 + 18198594-18202269,18202551-18202591,18203273-182032... 28 8.5
05_01_0040 - 273384-273437,273920-274102,274465-274677,275479-27... 28 8.5
04_03_1017 + 21747044-21748051 28 8.5
03_05_1153 + 30787574-30787608,30787982-30788089,30788651-307886... 28 8.5
03_05_0520 + 25139314-25139364,25139580-25139711,25141594-251417... 28 8.5
01_06_0347 + 28592552-28593502 28 8.5
>07_03_1160 - 24430240-24431268
Length = 342
Score = 33.5 bits (73), Expect = 0.23
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = +1
Query: 571 PGVEFTSTSLNPESPQSIPNQPPDSLPAKPPSEGYP 678
P V ST NP P SIPNQPP +P P P
Sbjct: 209 PSVPDQSTQPNPNGP-SIPNQPPQPIPNGPIKPDQP 243
>06_02_0046 +
10928708-10928798,10929997-10930077,10930567-10930685,
10931275-10931894,10931992-10933184,10933280-10933359,
10933751-10933846,10933931-10934004,10936007-10936151,
10936323-10936487
Length = 887
Score = 33.1 bits (72), Expect = 0.30
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 604 PESPQSIPNQPPDSLPAKPPSEGYPCELSLSTVSVP-GFVCKGQLLF 741
P + IP PP++ PA PP P S+ST ++P +V + L++
Sbjct: 497 PPEDEWIPPPPPENEPAPPPPPEEPAVSSVSTETIPQSYVDQANLVY 543
>05_03_0107 - 8470386-8470559,8470694-8471737
Length = 405
Score = 31.5 bits (68), Expect = 0.91
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +1
Query: 586 TSTSLNPESPQSIPNQPPDSLPAKPPSEGYPCELSLSTVSVPGFVCKGQLLFEDQ 750
T T P S S+ P PA + PC T+ G + KG+++ EDQ
Sbjct: 3 TVTQAPPPSTPSMVGNPDGGAPAAAADQSAPCATGGETLVGEGRLRKGKMVAEDQ 57
>01_07_0360 + 43056226-43057566
Length = 446
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +2
Query: 176 RECTKHVCGSCYLKSCCATRHHRPRSKQYTLKDLGFPF-QMRASRYSRFTVNSTR 337
+EC +C +C L CC H +P K L PF + SR T NS +
Sbjct: 330 KECGHQMCAACTLAICC---HSKPNPKTLLLHPPACPFCRTTISRLVVATTNSNK 381
>08_02_0181 +
13923658-13923661,13925518-13925681,13925879-13925978,
13926072-13926244,13926486-13927016
Length = 323
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +1
Query: 475 GLGYRQDNGEWTVEGFVDEAGNPVNTEGSEITPGVEFTSTSLNPESPQSIPNQPPDSLP- 651
G G+ + E TV+ + + GN ++ GS+ VE P+ P + P++ DS P
Sbjct: 118 GFGFVVFDAEKTVDELLAKKGNMIDLNGSQ----VEIKKA--EPKKPSNPPHRSFDSEPR 171
Query: 652 AKPPSEGY 675
+P ++GY
Sbjct: 172 GRPHADGY 179
>01_06_0146 + 26969011-26969995,26970878-26970930
Length = 345
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 604 PESPQSIPNQPPDSLPAKPPSEGYP 678
P Q P PP SLP PP+ G P
Sbjct: 107 PAPDQPAPPSPPPSLPPSPPAPGSP 131
>10_08_0435 +
17905728-17905901,17906608-17906931,17907205-17907321,
17908418-17908597,17909064-17909190,17909327-17909440,
17909794-17909909
Length = 383
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = +1
Query: 589 STSLNPESPQSIPNQPPD---SLPAKPPSEG 672
ST++ P ++ P+QPP + P++PP EG
Sbjct: 93 STAVKPRRERTAPSQPPSIGPTAPSQPPKEG 123
>03_03_0278 - 16126803-16129049
Length = 748
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Frame = +1
Query: 517 GFVDEAGNPVN---TEGSEITPGVEFTSTSLNPESPQSIPNQPPDSLPAKPPSEGYPC 681
GF + A N T G++ G +S P P P Q P PAKPP+ C
Sbjct: 154 GFYNFAANAAASKVTRGNKQKAGPATSSVRQRPPPPPPPPRQAPAPPPAKPPTFWTSC 211
>03_01_0414 +
3183292-3183735,3184547-3184969,3185435-3185535,
3186178-3187439,3187625-3187665,3187777-3187845,
3187975-3188075,3188413-3188491,3188570-3188668,
3188757-3188825,3188918-3188967,3189211-3189387,
3189496-3189634
Length = 1017
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +1
Query: 616 QSIPNQ-PPDSLPAKPPSEGYPCELSLSTVS 705
Q +P Q PP PA PS G P LS+STVS
Sbjct: 26 QGLPQQTPPSPSPASSPSGGPPA-LSVSTVS 55
>01_01_0728 + 5684699-5685025
Length = 108
Score = 29.5 bits (63), Expect = 3.7
Identities = 21/73 (28%), Positives = 29/73 (39%)
Frame = +1
Query: 493 DNGEWTVEGFVDEAGNPVNTEGSEITPGVEFTSTSLNPESPQSIPNQPPDSLPAKPPSEG 672
D GE E G+ + + G T++S PE +P +PP LP PP+
Sbjct: 33 DGGEIVQEAVTMMMGSSAGAAAAAVA-GRRSTASSSPPEEEMLLPRRPP--LPLSPPAAT 89
Query: 673 YPCELSLSTVSVP 711
S SVP
Sbjct: 90 TGARSSRMLGSVP 102
>01_01_0103 -
773727-774737,774797-774813,774852-775078,777465-778237
Length = 675
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -3
Query: 203 THTHVLYILVTDVVFYLVR*V*LNTTCKMFTCEYVRNATYP 81
T +VL ++V D ++VR C+ F+C +++N +YP
Sbjct: 8 TVLYVLALVVADADHHVVRVQGRRHQCQPFSCGHLQNVSYP 48
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 604 PESPQSIPNQPPDSLPAKPPSEGYPCELSLSTVSVP 711
P SP P PP LP+ PP + P L + +P
Sbjct: 1174 PLSPSLPPPPPPPPLPSGPPPQPAPPPLPIQPPPIP 1209
>11_05_0103 -
19083663-19083856,19083962-19084169,19084239-19084323,
19084591-19084865
Length = 253
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = -2
Query: 675 IAFRWWFSGQAVWRLIGYRLRGL--WVQTGAGEFYSWCYFRALCVYWIT 535
+ WW G V R +GL WV+ G + +W + + + W+T
Sbjct: 123 VGLEWWAVGHMVKRPDNKDNKGLEWWVKEIVGPWVTWWWVKEIVGPWVT 171
>09_04_0574 +
18645363-18645870,18645995-18646491,18646631-18646696,
18646921-18646989,18647401-18647466
Length = 401
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 574 GVEFTSTSLNPESPQSIPNQPPDSLPAKPPSEGYPCELSLSTVS 705
G S++ SP + P SLP+K P + P +LSL S
Sbjct: 241 GYAMGSSAWEEPSPPATSLLPDSSLPSKRPRDDLPRQLSLPAAS 284
>08_01_0381 -
3382316-3382459,3382872-3382907,3383323-3383429,
3383518-3383587,3383839-3384663,3384748-3385044,
3385175-3385501,3385760-3386046,3386728-3386896
Length = 753
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +1
Query: 523 VDEAG---NPVNTEGSEITPGVEFTSTSLNPESPQSIPNQPPDSLPAKPPSEGYP 678
VD +G P + + P +E +T LN ESP+S ++ P LPA ++ P
Sbjct: 176 VDRSGYSPTPSRSTPDNMEP-IEDGNTPLNRESPESALHESPIDLPALTEAQAAP 229
>06_03_0649 +
23138442-23138842,23139576-23139849,23139929-23140562,
23140771-23140826,23141178-23141282,23141295-23141535,
23142686-23142690
Length = 571
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 589 STSLNPESPQSIPNQPPDSLPAKPPSEGYP 678
+TS +P +P +IP +PP S P P P
Sbjct: 56 ATSSSPAAPTAIPPRPPQSSPIFVPDSPNP 85
>06_03_0310 -
19453047-19453160,19453240-19453338,19453441-19453513,
19453598-19453708,19453795-19453956,19454064-19454340,
19454542-19455160,19455256-19455471
Length = 556
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 565 ITPGVEFTSTSLNPESPQSIPNQPPDSLPAKP 660
I PG + S + +P +P S P P SLP P
Sbjct: 140 ILPGRQAASRAPSPPAPPSPPQDPAPSLPHAP 171
>05_04_0124 + 18232961-18236636,18236810-18237288,18237549-18237629,
18238033-18238041,18238096-18238248
Length = 1465
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 634 PPDSLPAKPPSEGYPCEL 687
PPD L A+P ++G PC L
Sbjct: 1056 PPDRLSARPSTDGGPCNL 1073
>05_04_0122 + 18198594-18202269,18202551-18202591,18203273-18203281,
18203336-18203551,18204257-18204361,18204761-18204919
Length = 1401
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 634 PPDSLPAKPPSEGYPCEL 687
PPD L A+P ++G PC L
Sbjct: 1056 PPDRLSARPSTDGGPCNL 1073
>05_01_0040 -
273384-273437,273920-274102,274465-274677,275479-276294,
276431-276823,277233-277238
Length = 554
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +1
Query: 289 PDEGFSLFAFHGKLNEEMEGLEAGHWSRDITKPKNGRWIFRDRNAALKVG 438
PD+ + F+G+ +E +E + ++ +IT P + +W F +R +L G
Sbjct: 115 PDQFTAFSNFNGQSSEHLETAKGANYMDEIT-PISRQWCFDNRGPSLPRG 163
>04_03_1017 + 21747044-21748051
Length = 335
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/51 (29%), Positives = 20/51 (39%)
Frame = +1
Query: 559 SEITPGVEFTSTSLNPESPQSIPNQPPDSLPAKPPSEGYPCELSLSTVSVP 711
+++TP S P +P PD P+ PPS P TV P
Sbjct: 250 TQMTPPRRAASPDYTPSTPPPPRAASPDYTPSTPPSSPLPSAAESFTVPPP 300
>03_05_1153 +
30787574-30787608,30787982-30788089,30788651-30788689,
30789181-30789184,30789496-30789580,30789609-30790321
Length = 327
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +1
Query: 574 GVEFTSTSLNPESPQSIPNQPPDSLPAKPPSEGYPC 681
G S PE + PP +P PP + YPC
Sbjct: 274 GCHCCSCGKAPEPAPAPAPPPPQYIPCYPPQQPYPC 309
>03_05_0520 +
25139314-25139364,25139580-25139711,25141594-25141731,
25143191-25143241,25143662-25143751,25143854-25144000,
25144108-25144218,25144307-25144375,25144777-25145517,
25145840-25146004,25146376-25146442,25146580-25146704,
25148714-25148983,25149065-25149199,25149316-25149497,
25149669-25149744
Length = 849
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 592 TSLNPESPQSIPNQPPDSLPAKPPSEGYPCELSLSTVSV 708
T+ +P+S P PP + ++P P +S ST +V
Sbjct: 282 TASQESNPESAPQTPPSKVGSQPSVPVVPTTISTSTAAV 320
>01_06_0347 + 28592552-28593502
Length = 316
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 601 NPESPQSIPNQPP-DSLPAKPPSEGYPCELSLSTVSVPG 714
+P P QP D +PA PPS + SLS++S PG
Sbjct: 70 SPTRPVVFSMQPHFDLVPALPPSSPQVPQSSLSSLSAPG 108
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,666,442
Number of Sequences: 37544
Number of extensions: 580946
Number of successful extensions: 1980
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1968
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -