Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_D12
         (937 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_03_0042 + 14009649-14009866,14011342-14011419,14011791-140119...    31   1.7  
07_03_1267 + 25318220-25318407,25318674-25318844,25319086-253191...    30   2.3  
06_03_1414 + 30012195-30012360,30012448-30012830                       30   2.3  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    30   2.3  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   4.0  
02_04_0400 - 22608519-22608844,22609044-22609122                       29   5.3  

>03_03_0042 +
           14009649-14009866,14011342-14011419,14011791-14011955,
           14012071-14012138,14012219-14012258,14013579-14013690,
           14013859-14013942
          Length = 254

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 14/40 (35%), Positives = 17/40 (42%)
 Frame = +1

Query: 577 HPXXXGGGGXXXPPPRGGXXFPPXPGGXXXKKXLXTTXPK 696
           +P   GGGG     PR G   PP P G   +    T  P+
Sbjct: 36  YPRGGGGGGGGGEGPRRGYGRPPAPTGLLVRNISLTARPE 75


>07_03_1267 +
           25318220-25318407,25318674-25318844,25319086-25319188,
           25319394-25319885,25320723-25321156,25321333-25321388,
           25321711-25321775,25322139-25322147
          Length = 505

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -3

Query: 650 GXGGNXXPPLGGGXXXPPPP 591
           G GG   PP GG    PPPP
Sbjct: 80  GGGGEMPPPYGGAAAAPPPP 99



 Score = 28.3 bits (60), Expect = 9.3
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +1

Query: 592 GGGGXXXPPPRGGXXFPPXP 651
           GGGG   PPP GG    P P
Sbjct: 79  GGGGGEMPPPYGGAAAAPPP 98


>06_03_1414 + 30012195-30012360,30012448-30012830
          Length = 182

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = +1

Query: 592 GGGGXXXPPPRGGXXFPPXPGG 657
           GGGG   PPP G    PP  GG
Sbjct: 134 GGGGGGSPPPSGVPLHPPAAGG 155


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 19/57 (33%), Positives = 20/57 (35%), Gaps = 7/57 (12%)
 Frame = +1

Query: 580  PXXXGGGGXXXPPPRGGXXFPPXP-------GGXXXKKXLXTTXPKXPXKKXRGGXG 729
            P   G GG   PPP GG   PP P       GG           P  P  +  GG G
Sbjct: 1140 PLPEGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVG 1196


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 17/53 (32%), Positives = 18/53 (33%), Gaps = 2/53 (3%)
 Frame = +1

Query: 505 KXPPPXXXXXXXXXXXXXXXDKKXHPXXXGG--GGXXXPPPRGGXXFPPXPGG 657
           K PPP                    P   GG  GG   PPP+GG   PP   G
Sbjct: 342 KGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPPAAPG 394


>02_04_0400 - 22608519-22608844,22609044-22609122
          Length = 134

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +1

Query: 592 GGGGXXXPPPRGGXXFPPXPG 654
           GGGG    PP  G  +PP PG
Sbjct: 87  GGGGGGYYPPWNGGYYPPGPG 107


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.317    0.147    0.489 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,903,701
Number of Sequences: 37544
Number of extensions: 255872
Number of successful extensions: 653
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2682675460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)