Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_D07
         (877 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0309 - 2439746-2440247,2440618-2440692,2441325-2441826,244...    31   1.2  
02_02_0365 + 9488328-9488583,9489343-9489495,9491159-9491451,949...    29   3.7  
01_05_0200 - 19196606-19197304                                         29   3.7  
05_05_0082 + 22252993-22255617                                         29   6.5  
03_06_0448 - 34005581-34005655,34005735-34005830,34006669-340076...    29   6.5  
09_06_0097 + 20845417-20845518,20845728-20846581,20846666-208467...    28   8.5  
01_01_1187 + 9444742-9445317                                           28   8.5  

>05_01_0309 -
           2439746-2440247,2440618-2440692,2441325-2441826,
           2442366-2442579,2442654-2442725
          Length = 454

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 23/79 (29%), Positives = 39/79 (49%)
 Frame = +1

Query: 361 SLILTQNAQKKFVRQALWIYLVEVIPRGRRKKCSRMLRHSSHNTTLQSSERTQKPTKRG* 540
           S++L  N  K+ +      YLV   P   RK+ SR   H+S++    ++    K T  G 
Sbjct: 237 SIVLAFNMSKREISSCKTAYLV---PYFERKRRSRASSHASNSKLASTAVDASKSTANGK 293

Query: 541 TK*RGN*KKKERINLKLRN 597
           +K   + KK++  N+K R+
Sbjct: 294 SK-SSSRKKQKSKNIKERD 311


>02_02_0365 +
           9488328-9488583,9489343-9489495,9491159-9491451,
           9491538-9492105,9492503-9493011
          Length = 592

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 21/76 (27%), Positives = 37/76 (48%)
 Frame = +3

Query: 63  ARGSLFSGYEIQMSNFFKICCVKDPGGSAKENLRKMDQVNGHFVSATCPFSGESVELKVD 242
           A+ S+   Y  Q S    +CC +   GS  + ++   ++NGH  +    FS ++V+   D
Sbjct: 355 AKTSIMDSYGKQSS----LCCTESTSGSLGQIIQSRKKLNGH--NPQQLFSMDNVD-SSD 407

Query: 243 SNQKQVKPNLRIKVPQ 290
           S QK    +  ++ PQ
Sbjct: 408 SFQKNDNESFLLRTPQ 423


>01_05_0200 - 19196606-19197304
          Length = 232

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +3

Query: 423 GRGDTPRTAEEVFKDAQAFLTQYYASIKRENSEAHKARLD 542
           G G+   + +E+F  A+AF+  +Y  +K +  E+ K   D
Sbjct: 179 GGGEQMMSKQELFTKAEAFIGNFYKQLKMQREESWKKLQD 218


>05_05_0082 + 22252993-22255617
          Length = 874

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +3

Query: 744 TNKGNIRSAITIFPQRTDGKHDYXIWNPQLINYA 845
           + KGNI SA  +F ++TD   D   WN  +  YA
Sbjct: 548 SRKGNIDSAQIVFERQTD--RDLVSWNSMISGYA 579


>03_06_0448 - 34005581-34005655,34005735-34005830,34006669-34007616,
            34007684-34007851,34007908-34008099,34008164-34008346,
            34008414-34008590,34008667-34012074
          Length = 1748

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 1/104 (0%)
 Frame = +3

Query: 114  KICCVKDPGGSAKENLRKMDQVNGHFV-SATCPFSGESVELKVDSNQKQVKPNLRIKVPQ 290
            K CC+++ GG   + + K  +   H          GE +    + N+ +       K+PQ
Sbjct: 847  KACCIEEIGGENSQMVEKASKQKPHEAHQVNMVECGEDINPMKNDNEDE-----HDKIPQ 901

Query: 291  PIRLKNHVAHDENFDTLHSRINEVTHFNTKCSEKVCQTSIMDIP 422
            P  L+N ++ D N  ++ S + E  + +T     + +    D+P
Sbjct: 902  P--LENAIS-DSNMTSVFSGVPEAENADTDKGLFLAKKDSEDMP 942


>09_06_0097 +
           20845417-20845518,20845728-20846581,20846666-20846726,
           20847320-20847358,20847602-20847682
          Length = 378

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = +3

Query: 228 ELKVDSNQKQVKPNLRIKVPQPIRLKNHVAHDENFDTLHSRINEVTHFNTKC 383
           E +  +NQ Q+  ++  +  Q  + K   AHD   D   +RI  + H  TKC
Sbjct: 105 EFEKKANQLQIIADIETEREQSAKKKEQAAHDRLRDASTARIVAIDH--TKC 154


>01_01_1187 + 9444742-9445317
          Length = 191

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 613 SWLGVMRPGASEEYSGKSYRYSIA 684
           SW+G +   A+  Y G SYR S+A
Sbjct: 78  SWVGTIAGSAATAYEGTSYRLSLA 101


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,460,941
Number of Sequences: 37544
Number of extensions: 449758
Number of successful extensions: 1186
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1183
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)