Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_D06
(937 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC141863-1|AAI41864.1| 407|Homo sapiens TPRX1 protein protein. 36 0.16
AK097640-1|BAC05130.1| 411|Homo sapiens protein ( Homo sapiens ... 36 0.16
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 32 2.6
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 32 2.6
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 32 2.6
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 32 2.6
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 32 2.6
BC117257-1|AAI17258.1| 1262|Homo sapiens diaphanous homolog 1 (D... 32 3.4
AY363395-1|AAQ63049.1| 1272|Homo sapiens diaphanous 1 protein. 32 3.4
AB209482-1|BAD92719.1| 1299|Homo sapiens Diaphanous 1 variant pr... 32 3.4
AK023345-1|BAB14533.1| 533|Homo sapiens protein ( Homo sapiens ... 31 4.6
BC150182-1|AAI50183.1| 1192|Homo sapiens reticulon 4 protein. 31 6.0
BC071848-1|AAH71848.1| 343|Homo sapiens RTN4 protein protein. 31 6.0
BC068991-1|AAH68991.1| 373|Homo sapiens reticulon 4 protein. 31 6.0
BC026788-1|AAH26788.1| 373|Homo sapiens reticulon 4 protein. 31 6.0
BC016165-1|AAH16165.1| 392|Homo sapiens reticulon 4 protein. 31 6.0
BC012619-1|AAH12619.1| 373|Homo sapiens reticulon 4 protein. 31 6.0
BC010737-1|AAH10737.1| 373|Homo sapiens reticulon 4 protein. 31 6.0
AY102285-3|AAM64241.1| 373|Homo sapiens RTN4 protein. 31 6.0
AY102285-2|AAM64242.1| 392|Homo sapiens RTN4 protein. 31 6.0
AY102285-1|AAM64243.1| 1192|Homo sapiens RTN4 protein. 31 6.0
AY102279-1|AAM64248.1| 1192|Homo sapiens RTN4 isoform A protein. 31 6.0
AY102278-1|AAM64247.1| 392|Homo sapiens RTN4 isoform B2 protein. 31 6.0
AY102277-1|AAM64246.1| 373|Homo sapiens RTN4 isoform B1 protein. 31 6.0
AL121832-5|CAI23283.2| 478|Homo sapiens Cdk5 and Abl enzyme sub... 31 6.0
AJ251384-1|CAB99249.1| 373|Homo sapiens Nogo-B protein protein. 31 6.0
AJ251383-1|CAB99248.1| 1192|Homo sapiens Nogo-A protein protein. 31 6.0
AF148538-1|AAG12177.1| 373|Homo sapiens reticulon 4b protein. 31 6.0
AF148537-1|AAG12176.1| 1192|Homo sapiens reticulon 4a protein. 31 6.0
AF132047-1|AAD31021.1| 373|Homo sapiens foocen-m protein. 31 6.0
AC093165-1|AAY24029.1| 185|Homo sapiens unknown protein. 31 6.0
AB040463-1|BAB18928.1| 373|Homo sapiens RTN-xS protein. 31 6.0
AB040462-1|BAB18927.1| 1192|Homo sapiens RTN-xL protein. 31 6.0
AB020693-1|BAA74909.2| 1233|Homo sapiens KIAA0886 protein protein. 31 6.0
U19927-1|AAC50140.1| 502|Homo sapiens WAS protein. 31 8.0
U12707-1|AAA62663.1| 502|Homo sapiens Wiskott-Aldrich syndrome ... 31 8.0
BC012738-1|AAH12738.1| 502|Homo sapiens Wiskott-Aldrich syndrom... 31 8.0
BC002961-1|AAH02961.1| 514|Homo sapiens WAS protein protein. 31 8.0
AF115549-1|AAD26691.1| 502|Homo sapiens Wiskott-Aldrich Syndrom... 31 8.0
>BC141863-1|AAI41864.1| 407|Homo sapiens TPRX1 protein protein.
Length = 407
Score = 36.3 bits (80), Expect = 0.16
Identities = 25/88 (28%), Positives = 31/88 (35%), Gaps = 1/88 (1%)
Frame = +3
Query: 675 GPXXRREKKXPA-VPPXKXPSGXPLXXPSPLXXXLSAXXPSGKGGXXXITPPXRYPKSGV 851
GP R +K PA + P P P+ P+ + L P G I P P G
Sbjct: 79 GPGCRAQKGIPAALSPGPGPIPAPIPGPAQIPGPLPGSIPGPIPGPAQIPSPIPAPIPGP 138
Query: 852 XSFAPXXXGLXKPPXPXPXXGPLXXXKP 935
S G + P P P GP P
Sbjct: 139 ISGPVQIPGPFRGPIPGPISGPAPIPGP 166
>AK097640-1|BAC05130.1| 411|Homo sapiens protein ( Homo sapiens
cDNA FLJ40321 fis, clone TESTI2030860. ).
Length = 411
Score = 36.3 bits (80), Expect = 0.16
Identities = 25/88 (28%), Positives = 31/88 (35%), Gaps = 1/88 (1%)
Frame = +3
Query: 675 GPXXRREKKXPA-VPPXKXPSGXPLXXPSPLXXXLSAXXPSGKGGXXXITPPXRYPKSGV 851
GP R +K PA + P P P+ P+ + L P G I P P G
Sbjct: 79 GPGCRAQKGIPAALSPGPGPIPAPIPGPAQIPGPLPGSIPGPIPGPAQIPSPIPAPIPGP 138
Query: 852 XSFAPXXXGLXKPPXPXPXXGPLXXXKP 935
S G + P P P GP P
Sbjct: 139 ISGPVQIPGPFRGPIPGPISGPAPIPGP 166
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing
factor protein.
Length = 707
Score = 32.3 bits (70), Expect = 2.6
Identities = 25/73 (34%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Frame = +3
Query: 705 PAVPPXKX--PSGXPLXXPSPLXXXLSAXXPSGKGGXXXITPPXRYPKSGVXSFAPXXXG 878
PA PP P P P+P SA P G PP P SGV + P G
Sbjct: 133 PATPPTSGAPPGSGPGPTPTPPPAVTSA--PPG-------APPPTPPSSGVPTTPPQAGG 183
Query: 879 LXKPPXPXPXXGP 917
PP P GP
Sbjct: 184 PPPPPAAVPGPGP 196
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 32.3 bits (70), Expect = 2.6
Identities = 25/73 (34%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Frame = +3
Query: 705 PAVPPXKX--PSGXPLXXPSPLXXXLSAXXPSGKGGXXXITPPXRYPKSGVXSFAPXXXG 878
PA PP P P P+P SA P G PP P SGV + P G
Sbjct: 133 PATPPTSGAPPGSGPGPTPTPPPAVTSA--PPG-------APPPTPPSSGVPTTPPQAGG 183
Query: 879 LXKPPXPXPXXGP 917
PP P GP
Sbjct: 184 PPPPPAAVPGPGP 196
>BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein.
Length = 525
Score = 32.3 bits (70), Expect = 2.6
Identities = 25/73 (34%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Frame = +3
Query: 705 PAVPPXKX--PSGXPLXXPSPLXXXLSAXXPSGKGGXXXITPPXRYPKSGVXSFAPXXXG 878
PA PP P P P+P SA P G PP P SGV + P G
Sbjct: 133 PATPPTSGAPPGSGPGPTPTPPPAVTSA--PPG-------APPPTPPSSGVPTTPPQAGG 183
Query: 879 LXKPPXPXPXXGP 917
PP P GP
Sbjct: 184 PPPPPAAVPGPGP 196
>BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein.
Length = 634
Score = 32.3 bits (70), Expect = 2.6
Identities = 25/73 (34%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Frame = +3
Query: 705 PAVPPXKX--PSGXPLXXPSPLXXXLSAXXPSGKGGXXXITPPXRYPKSGVXSFAPXXXG 878
PA PP P P P+P SA P G PP P SGV + P G
Sbjct: 60 PATPPTSGAPPGSGPGPTPTPPPAVTSA--PPG-------APPPTPPSSGVPTTPPQAGG 110
Query: 879 LXKPPXPXPXXGP 917
PP P GP
Sbjct: 111 PPPPPAAVPGPGP 123
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 32.3 bits (70), Expect = 2.6
Identities = 25/73 (34%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Frame = +3
Query: 705 PAVPPXKX--PSGXPLXXPSPLXXXLSAXXPSGKGGXXXITPPXRYPKSGVXSFAPXXXG 878
PA PP P P P+P SA P G PP P SGV + P G
Sbjct: 133 PATPPTSGAPPGSGPGPTPTPPPAVTSA--PPG-------APPPTPPSSGVPTTPPQAGG 183
Query: 879 LXKPPXPXPXXGP 917
PP P GP
Sbjct: 184 PPPPPAAVPGPGP 196
>BC117257-1|AAI17258.1| 1262|Homo sapiens diaphanous homolog 1
(Drosophila) protein.
Length = 1262
Score = 31.9 bits (69), Expect = 3.4
Identities = 22/78 (28%), Positives = 27/78 (34%), Gaps = 1/78 (1%)
Frame = +3
Query: 705 PAVPPXKXPSGXPLXXPSPLXXXLSAXXPSGKGGXXXITPPXRYPKS-GVXSFAPXXXGL 881
P PP P G + P L + P G I PP P+ G+ S + G
Sbjct: 604 PPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGT 663
Query: 882 XKPPXPXPXXGPLXXXKP 935
PP P P G P
Sbjct: 664 AIPP-PPPLPGSARIPPP 680
>AY363395-1|AAQ63049.1| 1272|Homo sapiens diaphanous 1 protein.
Length = 1272
Score = 31.9 bits (69), Expect = 3.4
Identities = 22/78 (28%), Positives = 27/78 (34%), Gaps = 1/78 (1%)
Frame = +3
Query: 705 PAVPPXKXPSGXPLXXPSPLXXXLSAXXPSGKGGXXXITPPXRYPKS-GVXSFAPXXXGL 881
P PP P G + P L + P G I PP P+ G+ S + G
Sbjct: 614 PPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGT 673
Query: 882 XKPPXPXPXXGPLXXXKP 935
PP P P G P
Sbjct: 674 AIPP-PPPLPGSARIPPP 690
>AB209482-1|BAD92719.1| 1299|Homo sapiens Diaphanous 1 variant
protein.
Length = 1299
Score = 31.9 bits (69), Expect = 3.4
Identities = 22/78 (28%), Positives = 27/78 (34%), Gaps = 1/78 (1%)
Frame = +3
Query: 705 PAVPPXKXPSGXPLXXPSPLXXXLSAXXPSGKGGXXXITPPXRYPKS-GVXSFAPXXXGL 881
P PP P G + P L + P G I PP P+ G+ S + G
Sbjct: 641 PPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGT 700
Query: 882 XKPPXPXPXXGPLXXXKP 935
PP P P G P
Sbjct: 701 AIPP-PPPLPGSARIPPP 717
>AK023345-1|BAB14533.1| 533|Homo sapiens protein ( Homo sapiens
cDNA FLJ13283 fis, clone OVARC1001113, highly similar to
Homo sapiens diaphanous 1 (HDIA1) mRNA. ).
Length = 533
Score = 31.5 bits (68), Expect = 4.6
Identities = 19/66 (28%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Frame = +3
Query: 705 PAVPPXKXPSGXPLXXPSPLXXXLSAXXPSGKGGXXXITPPXRYPKS-GVXSFAPXXXGL 881
P PP P G + P L + P G I PP P+ G+ S + G
Sbjct: 381 PPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGT 440
Query: 882 XKPPXP 899
PP P
Sbjct: 441 AIPPPP 446
>BC150182-1|AAI50183.1| 1192|Homo sapiens reticulon 4 protein.
Length = 1192
Score = 31.1 bits (67), Expect = 6.0
Identities = 24/79 (30%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Frame = +3
Query: 705 PAVPPXKXPSGXPLXXPS--PLXXXLSAXXPSGKGGXXXITPPXRYPKSGVXSFAPXXXG 878
P V P + PS P S P LSA S PP R P S +P
Sbjct: 98 PPVAPERQPSWDPSPVSSTVPAPSPLSAAAVSPSKLPEDDEPPARPPPPPPASVSPQAEP 157
Query: 879 LXKPPXPXPXXGPLXXXKP 935
+ PP P P P P
Sbjct: 158 VWTPPAPAPAAPPSTPAAP 176
>BC071848-1|AAH71848.1| 343|Homo sapiens RTN4 protein protein.
Length = 343
Score = 31.1 bits (67), Expect = 6.0
Identities = 24/79 (30%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Frame = +3
Query: 705 PAVPPXKXPSGXPLXXPS--PLXXXLSAXXPSGKGGXXXITPPXRYPKSGVXSFAPXXXG 878
P V P + PS P S P LSA S PP R P S +P
Sbjct: 68 PPVAPERQPSWDPSPVSSTVPAPSPLSAAAVSPSKLPEDDEPPARPPPPPPASVSPQAEP 127
Query: 879 LXKPPXPXPXXGPLXXXKP 935
+ PP P P P P
Sbjct: 128 VWTPPAPAPAAPPSTPAAP 146
>BC068991-1|AAH68991.1| 373|Homo sapiens reticulon 4 protein.
Length = 373
Score = 31.1 bits (67), Expect = 6.0
Identities = 24/79 (30%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Frame = +3
Query: 705 PAVPPXKXPSGXPLXXPS--PLXXXLSAXXPSGKGGXXXITPPXRYPKSGVXSFAPXXXG 878
P V P + PS P S P LSA S PP R P S +P
Sbjct: 98 PPVAPERQPSWDPSPVSSTVPAPSPLSAAAVSPSKLPEDDEPPARPPPPPPASVSPQAEP 157
Query: 879 LXKPPXPXPXXGPLXXXKP 935
+ PP P P P P
Sbjct: 158 VWTPPAPAPAAPPSTPAAP 176
>BC026788-1|AAH26788.1| 373|Homo sapiens reticulon 4 protein.
Length = 373
Score = 31.1 bits (67), Expect = 6.0
Identities = 24/79 (30%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Frame = +3
Query: 705 PAVPPXKXPSGXPLXXPS--PLXXXLSAXXPSGKGGXXXITPPXRYPKSGVXSFAPXXXG 878
P V P + PS P S P LSA S PP R P S +P
Sbjct: 98 PPVAPERQPSWDPSPVSSTVPAPSPLSAAAVSPSKLPEDDEPPARPPPPPPASVSPQAEP 157
Query: 879 LXKPPXPXPXXGPLXXXKP 935
+ PP P P P P
Sbjct: 158 VWTPPAPAPAAPPSTPAAP 176
>BC016165-1|AAH16165.1| 392|Homo sapiens reticulon 4 protein.
Length = 392
Score = 31.1 bits (67), Expect = 6.0
Identities = 24/79 (30%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Frame = +3
Query: 705 PAVPPXKXPSGXPLXXPS--PLXXXLSAXXPSGKGGXXXITPPXRYPKSGVXSFAPXXXG 878
P V P + PS P S P LSA S PP R P S +P
Sbjct: 98 PPVAPERQPSWDPSPVSSTVPAPSPLSAAAVSPSKLPEDDEPPARPPPPPPASVSPQAEP 157
Query: 879 LXKPPXPXPXXGPLXXXKP 935
+ PP P P P P
Sbjct: 158 VWTPPAPAPAAPPSTPAAP 176
>BC012619-1|AAH12619.1| 373|Homo sapiens reticulon 4 protein.
Length = 373
Score = 31.1 bits (67), Expect = 6.0
Identities = 24/79 (30%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Frame = +3
Query: 705 PAVPPXKXPSGXPLXXPS--PLXXXLSAXXPSGKGGXXXITPPXRYPKSGVXSFAPXXXG 878
P V P + PS P S P LSA S PP R P S +P
Sbjct: 98 PPVAPERQPSWDPSPVSSTVPAPSPLSAAAVSPSKLPEDDEPPARPPPPPPASVSPQAEP 157
Query: 879 LXKPPXPXPXXGPLXXXKP 935
+ PP P P P P
Sbjct: 158 VWTPPAPAPAAPPSTPAAP 176
>BC010737-1|AAH10737.1| 373|Homo sapiens reticulon 4 protein.
Length = 373
Score = 31.1 bits (67), Expect = 6.0
Identities = 24/79 (30%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Frame = +3
Query: 705 PAVPPXKXPSGXPLXXPS--PLXXXLSAXXPSGKGGXXXITPPXRYPKSGVXSFAPXXXG 878
P V P + PS P S P LSA S PP R P S +P
Sbjct: 98 PPVAPERQPSWDPSPVSSTVPAPSPLSAAAVSPSKLPEDDEPPARPPPPPPASVSPQAEP 157
Query: 879 LXKPPXPXPXXGPLXXXKP 935
+ PP P P P P
Sbjct: 158 VWTPPAPAPAAPPSTPAAP 176
>AY102285-3|AAM64241.1| 373|Homo sapiens RTN4 protein.
Length = 373
Score = 31.1 bits (67), Expect = 6.0
Identities = 24/79 (30%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Frame = +3
Query: 705 PAVPPXKXPSGXPLXXPS--PLXXXLSAXXPSGKGGXXXITPPXRYPKSGVXSFAPXXXG 878
P V P + PS P S P LSA S PP R P S +P
Sbjct: 98 PPVAPERQPSWDPSPVSSTVPAPSPLSAAAVSPSKLPEDDEPPARPPPPPPASVSPQAEP 157
Query: 879 LXKPPXPXPXXGPLXXXKP 935
+ PP P P P P
Sbjct: 158 VWTPPAPAPAAPPSTPAAP 176
>AY102285-2|AAM64242.1| 392|Homo sapiens RTN4 protein.
Length = 392
Score = 31.1 bits (67), Expect = 6.0
Identities = 24/79 (30%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Frame = +3
Query: 705 PAVPPXKXPSGXPLXXPS--PLXXXLSAXXPSGKGGXXXITPPXRYPKSGVXSFAPXXXG 878
P V P + PS P S P LSA S PP R P S +P
Sbjct: 98 PPVAPERQPSWDPSPVSSTVPAPSPLSAAAVSPSKLPEDDEPPARPPPPPPASVSPQAEP 157
Query: 879 LXKPPXPXPXXGPLXXXKP 935
+ PP P P P P
Sbjct: 158 VWTPPAPAPAAPPSTPAAP 176
>AY102285-1|AAM64243.1| 1192|Homo sapiens RTN4 protein.
Length = 1192
Score = 31.1 bits (67), Expect = 6.0
Identities = 24/79 (30%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Frame = +3
Query: 705 PAVPPXKXPSGXPLXXPS--PLXXXLSAXXPSGKGGXXXITPPXRYPKSGVXSFAPXXXG 878
P V P + PS P S P LSA S PP R P S +P
Sbjct: 98 PPVAPERQPSWDPSPVSSTVPAPSPLSAAAVSPSKLPEDDEPPARPPPPPPASVSPQAEP 157
Query: 879 LXKPPXPXPXXGPLXXXKP 935
+ PP P P P P
Sbjct: 158 VWTPPAPAPAAPPSTPAAP 176
>AY102279-1|AAM64248.1| 1192|Homo sapiens RTN4 isoform A protein.
Length = 1192
Score = 31.1 bits (67), Expect = 6.0
Identities = 24/79 (30%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Frame = +3
Query: 705 PAVPPXKXPSGXPLXXPS--PLXXXLSAXXPSGKGGXXXITPPXRYPKSGVXSFAPXXXG 878
P V P + PS P S P LSA S PP R P S +P
Sbjct: 98 PPVAPERQPSWDPSPVSSTVPAPSPLSAAAVSPSKLPEDDEPPARPPPPPPASVSPQAEP 157
Query: 879 LXKPPXPXPXXGPLXXXKP 935
+ PP P P P P
Sbjct: 158 VWTPPAPAPAAPPSTPAAP 176
>AY102278-1|AAM64247.1| 392|Homo sapiens RTN4 isoform B2 protein.
Length = 392
Score = 31.1 bits (67), Expect = 6.0
Identities = 24/79 (30%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Frame = +3
Query: 705 PAVPPXKXPSGXPLXXPS--PLXXXLSAXXPSGKGGXXXITPPXRYPKSGVXSFAPXXXG 878
P V P + PS P S P LSA S PP R P S +P
Sbjct: 98 PPVAPERQPSWDPSPVSSTVPAPSPLSAAAVSPSKLPEDDEPPARPPPPPPASVSPQAEP 157
Query: 879 LXKPPXPXPXXGPLXXXKP 935
+ PP P P P P
Sbjct: 158 VWTPPAPAPAAPPSTPAAP 176
>AY102277-1|AAM64246.1| 373|Homo sapiens RTN4 isoform B1 protein.
Length = 373
Score = 31.1 bits (67), Expect = 6.0
Identities = 24/79 (30%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Frame = +3
Query: 705 PAVPPXKXPSGXPLXXPS--PLXXXLSAXXPSGKGGXXXITPPXRYPKSGVXSFAPXXXG 878
P V P + PS P S P LSA S PP R P S +P
Sbjct: 98 PPVAPERQPSWDPSPVSSTVPAPSPLSAAAVSPSKLPEDDEPPARPPPPPPASVSPQAEP 157
Query: 879 LXKPPXPXPXXGPLXXXKP 935
+ PP P P P P
Sbjct: 158 VWTPPAPAPAAPPSTPAAP 176
>AL121832-5|CAI23283.2| 478|Homo sapiens Cdk5 and Abl enzyme
substrate 2 protein.
Length = 478
Score = 31.1 bits (67), Expect = 6.0
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +3
Query: 678 PXXRREKKXPAVPPXKXPSGXPLXXPSPLXXXLSAXXPSGKG 803
P ++ PA PP + P+G P P+P P+G G
Sbjct: 73 PPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVPTGLG 114
>AJ251384-1|CAB99249.1| 373|Homo sapiens Nogo-B protein protein.
Length = 373
Score = 31.1 bits (67), Expect = 6.0
Identities = 24/79 (30%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Frame = +3
Query: 705 PAVPPXKXPSGXPLXXPS--PLXXXLSAXXPSGKGGXXXITPPXRYPKSGVXSFAPXXXG 878
P V P + PS P S P LSA S PP R P S +P
Sbjct: 98 PPVAPERQPSWDPSPVSSTVPAPSPLSAAAVSPSKLPEDDEPPARPPPPPPASVSPQAEP 157
Query: 879 LXKPPXPXPXXGPLXXXKP 935
+ PP P P P P
Sbjct: 158 VWTPPAPAPAAPPSTPAAP 176
>AJ251383-1|CAB99248.1| 1192|Homo sapiens Nogo-A protein protein.
Length = 1192
Score = 31.1 bits (67), Expect = 6.0
Identities = 24/79 (30%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Frame = +3
Query: 705 PAVPPXKXPSGXPLXXPS--PLXXXLSAXXPSGKGGXXXITPPXRYPKSGVXSFAPXXXG 878
P V P + PS P S P LSA S PP R P S +P
Sbjct: 98 PPVAPERQPSWDPSPVSSTVPAPSPLSAAAVSPSKLPEDDEPPARPPPPPPASVSPQAEP 157
Query: 879 LXKPPXPXPXXGPLXXXKP 935
+ PP P P P P
Sbjct: 158 VWTPPAPAPAAPPSTPAAP 176
>AF148538-1|AAG12177.1| 373|Homo sapiens reticulon 4b protein.
Length = 373
Score = 31.1 bits (67), Expect = 6.0
Identities = 24/79 (30%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Frame = +3
Query: 705 PAVPPXKXPSGXPLXXPS--PLXXXLSAXXPSGKGGXXXITPPXRYPKSGVXSFAPXXXG 878
P V P + PS P S P LSA S PP R P S +P
Sbjct: 98 PPVAPERQPSWDPSPVSSTVPAPSPLSAAAVSPSKLPEDDEPPARPPPPPPASVSPQAEP 157
Query: 879 LXKPPXPXPXXGPLXXXKP 935
+ PP P P P P
Sbjct: 158 VWTPPAPAPAAPPSTPAAP 176
>AF148537-1|AAG12176.1| 1192|Homo sapiens reticulon 4a protein.
Length = 1192
Score = 31.1 bits (67), Expect = 6.0
Identities = 24/79 (30%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Frame = +3
Query: 705 PAVPPXKXPSGXPLXXPS--PLXXXLSAXXPSGKGGXXXITPPXRYPKSGVXSFAPXXXG 878
P V P + PS P S P LSA S PP R P S +P
Sbjct: 98 PPVAPERQPSWDPSPVSSTVPAPSPLSAAAVSPSKLPEDDEPPARPPPPPPASVSPQAEP 157
Query: 879 LXKPPXPXPXXGPLXXXKP 935
+ PP P P P P
Sbjct: 158 VWTPPAPAPAAPPSTPAAP 176
>AF132047-1|AAD31021.1| 373|Homo sapiens foocen-m protein.
Length = 373
Score = 31.1 bits (67), Expect = 6.0
Identities = 24/79 (30%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Frame = +3
Query: 705 PAVPPXKXPSGXPLXXPS--PLXXXLSAXXPSGKGGXXXITPPXRYPKSGVXSFAPXXXG 878
P V P + PS P S P LSA S PP R P S +P
Sbjct: 98 PPVAPERQPSWDPSPVSSTVPAPSPLSAAAVSPSKLPEDDEPPARPPPPPPASVSPQAEP 157
Query: 879 LXKPPXPXPXXGPLXXXKP 935
+ PP P P P P
Sbjct: 158 VWTPPAPAPAAPPSTPAAP 176
>AC093165-1|AAY24029.1| 185|Homo sapiens unknown protein.
Length = 185
Score = 31.1 bits (67), Expect = 6.0
Identities = 24/79 (30%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Frame = +3
Query: 705 PAVPPXKXPSGXPLXXPS--PLXXXLSAXXPSGKGGXXXITPPXRYPKSGVXSFAPXXXG 878
P V P + PS P S P LSA S PP R P S +P
Sbjct: 98 PPVAPERQPSWDPSPVSSTVPAPSPLSAAAVSPSKLPEDDEPPARPPPPPPASVSPQAEP 157
Query: 879 LXKPPXPXPXXGPLXXXKP 935
+ PP P P P P
Sbjct: 158 VWTPPAPAPAAPPSTPAAP 176
>AB040463-1|BAB18928.1| 373|Homo sapiens RTN-xS protein.
Length = 373
Score = 31.1 bits (67), Expect = 6.0
Identities = 24/79 (30%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Frame = +3
Query: 705 PAVPPXKXPSGXPLXXPS--PLXXXLSAXXPSGKGGXXXITPPXRYPKSGVXSFAPXXXG 878
P V P + PS P S P LSA S PP R P S +P
Sbjct: 98 PPVAPERQPSWDPSPVSSTVPAPSPLSAAAVSPSKLPEDDEPPARPPPPPPASVSPQAEP 157
Query: 879 LXKPPXPXPXXGPLXXXKP 935
+ PP P P P P
Sbjct: 158 VWTPPAPAPAAPPSTPAAP 176
>AB040462-1|BAB18927.1| 1192|Homo sapiens RTN-xL protein.
Length = 1192
Score = 31.1 bits (67), Expect = 6.0
Identities = 24/79 (30%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Frame = +3
Query: 705 PAVPPXKXPSGXPLXXPS--PLXXXLSAXXPSGKGGXXXITPPXRYPKSGVXSFAPXXXG 878
P V P + PS P S P LSA S PP R P S +P
Sbjct: 98 PPVAPERQPSWDPSPVSSTVPAPSPLSAAAVSPSKLPEDDEPPARPPPPPPASVSPQAEP 157
Query: 879 LXKPPXPXPXXGPLXXXKP 935
+ PP P P P P
Sbjct: 158 VWTPPAPAPAAPPSTPAAP 176
>AB020693-1|BAA74909.2| 1233|Homo sapiens KIAA0886 protein protein.
Length = 1233
Score = 31.1 bits (67), Expect = 6.0
Identities = 24/79 (30%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Frame = +3
Query: 705 PAVPPXKXPSGXPLXXPS--PLXXXLSAXXPSGKGGXXXITPPXRYPKSGVXSFAPXXXG 878
P V P + PS P S P LSA S PP R P S +P
Sbjct: 139 PPVAPERQPSWDPSPVSSTVPAPSPLSAAAVSPSKLPEDDEPPARPPPPPPASVSPQAEP 198
Query: 879 LXKPPXPXPXXGPLXXXKP 935
+ PP P P P P
Sbjct: 199 VWTPPAPAPAAPPSTPAAP 217
>U19927-1|AAC50140.1| 502|Homo sapiens WAS protein.
Length = 502
Score = 30.7 bits (66), Expect = 8.0
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +2
Query: 443 PPPXTXGXXXXGRGPPXSXPPXXGXRXXXXPGXXPGXNX*ANGXPRGXXP 592
PPP G GRG P PP R P PG A G P P
Sbjct: 352 PPPTPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPG----AGGPPMPPPP 397
>U12707-1|AAA62663.1| 502|Homo sapiens Wiskott-Aldrich syndrome
protein protein.
Length = 502
Score = 30.7 bits (66), Expect = 8.0
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +2
Query: 443 PPPXTXGXXXXGRGPPXSXPPXXGXRXXXXPGXXPGXNX*ANGXPRGXXP 592
PPP G GRG P PP R P PG A G P P
Sbjct: 352 PPPTPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPG----AGGPPMPPPP 397
>BC012738-1|AAH12738.1| 502|Homo sapiens Wiskott-Aldrich syndrome
(eczema-thrombocytopenia) protein.
Length = 502
Score = 30.7 bits (66), Expect = 8.0
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +2
Query: 443 PPPXTXGXXXXGRGPPXSXPPXXGXRXXXXPGXXPGXNX*ANGXPRGXXP 592
PPP G GRG P PP R P PG A G P P
Sbjct: 352 PPPTPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPG----AGGPPMPPPP 397
>BC002961-1|AAH02961.1| 514|Homo sapiens WAS protein protein.
Length = 514
Score = 30.7 bits (66), Expect = 8.0
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +2
Query: 443 PPPXTXGXXXXGRGPPXSXPPXXGXRXXXXPGXXPGXNX*ANGXPRGXXP 592
PPP G GRG P PP R P PG A G P P
Sbjct: 364 PPPTPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPG----AGGPPMPPPP 409
>AF115549-1|AAD26691.1| 502|Homo sapiens Wiskott-Aldrich Syndrome
protein protein.
Length = 502
Score = 30.7 bits (66), Expect = 8.0
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +2
Query: 443 PPPXTXGXXXXGRGPPXSXPPXXGXRXXXXPGXXPGXNX*ANGXPRGXXP 592
PPP G GRG P PP R P PG A G P P
Sbjct: 352 PPPTPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPG----AGGPPMPPPP 397
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,190,556
Number of Sequences: 237096
Number of extensions: 1428362
Number of successful extensions: 2911
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2802
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12270013262
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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