Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_D05
         (871 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_1054 + 10847342-10847543,10847627-10847962,10848557-108488...   144   1e-34
02_01_0052 + 392339-392395,392604-393400,393520-393634,393831-39...    30   2.1  
07_01_0808 - 6326767-6327788,6328270-6328459                           29   3.7  
11_03_0120 - 10255303-10255518,10256490-10256582,10256774-102568...    29   6.4  
10_01_0333 + 3675806-3676001,3676783-3677783                           29   6.4  
10_01_0168 - 1883380-1883594,1884572-1888325                           28   8.5  

>12_01_1054 +
           10847342-10847543,10847627-10847962,10848557-10848807,
           10849226-10849313,10849548-10849723,10850597-10850656,
           10850811-10850901,10851563-10851639,10852565-10852653,
           10852950-10853061,10853623-10853725,10854892-10855121
          Length = 604

 Score =  144 bits (348), Expect = 1e-34
 Identities = 74/175 (42%), Positives = 103/175 (58%), Gaps = 9/175 (5%)
 Frame = +1

Query: 148 GWGCGYRTLQTICSWLKLN-HMDVAVPSIREIQSILVDLEDKSKTFIGSRQWIGSFEVCL 324
           GWGC YR+LQTI SW +L  +  + VPS REIQ +LV++ DK  +FIGSR+WIG+ E+  
Sbjct: 428 GWGCAYRSLQTIMSWYRLQQYSSINVPSHREIQQVLVEIGDKDPSFIGSREWIGAIELSF 487

Query: 325 VIDKLFDVPCKIIHINKGDDLKTIVDALVKHFIEYSSPVMMGGDVDCSSKGIMGIHIGDH 504
           V+DKL  V CK+I++  GD+L      L  HF    +PVM+GG V   +  ++G+   + 
Sbjct: 488 VLDKLLGVSCKVINVRSGDELPEKCRELAIHFETQGTPVMIGGGV--LAYTLLGVDYNES 545

Query: 505 G--ASLLVVDPHYVGKQPRKNYLQDHGWVKWQPLHD------FLSSSFYNLCLPQ 645
               + L++DPHY G    K  + + GW  W+   D      FL   FYNL LPQ
Sbjct: 546 SGDCAFLILDPHYTGADDLKK-IVNGGWCGWKKSIDSKGRSFFLKDKFYNLLLPQ 599


>02_01_0052 +
           392339-392395,392604-393400,393520-393634,393831-393926,
           394008-394079,395286-395381
          Length = 410

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 19/92 (20%)
 Frame = +1

Query: 145 KGWGCGYRTLQTICSWLKLNHMDVA---------VPSIREIQSILVDLEDKSKTFIGS-- 291
           KGWGCG+R +Q + S L     +           VP I  +Q  L    DK    +GS  
Sbjct: 110 KGWGCGWRNIQMLSSHLLKQRPEAREALFGGSGFVPDIPSLQRWLEIAWDKKFDTLGSSH 169

Query: 292 --------RQWIGSFEVCLVIDKLFDVPCKII 363
                   ++WIG+ E C  + + F +  +++
Sbjct: 170 FHNKVYGAKKWIGTTE-CAALLRSFGLRARVV 200


>07_01_0808 - 6326767-6327788,6328270-6328459
          Length = 403

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -1

Query: 277 FWIYLPSQPVSIESLVLKVQLHPYDLISARNISSE 173
           FW+  P  P  ++ +  KV LH   + ++RN+ SE
Sbjct: 304 FWVVHPGGPAILDQVEEKVALHKARMRASRNVLSE 338


>11_03_0120 -
           10255303-10255518,10256490-10256582,10256774-10256872,
           10258145-10258264,10258345-10258467,10259933-10260046,
           10261173-10261361,10263100-10263266,10263829-10263913,
           10264176-10264370,10266251-10266436,10266575-10266614,
           10267899-10267966
          Length = 564

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = +1

Query: 166 RTLQTICSWLKLNHMDVAVPSIREIQSILVDLED--KSKTFIGSRQW 300
           + L  IC W++  + +     +  I   L   ED  KSK ++GSR W
Sbjct: 310 KVLNMICCWIENPNSNAFRRHVPRIHDFLWLAEDGMKSKVYVGSRCW 356


>10_01_0333 + 3675806-3676001,3676783-3677783
          Length = 398

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -1

Query: 277 FWIYLPSQPVSIESLVLKVQLHPYDLISARNISSE 173
           FW   P     ++++  K+QLHP  L ++R + SE
Sbjct: 304 FWAVHPGGRAILDNIEDKLQLHPCKLAASRQVLSE 338


>10_01_0168 - 1883380-1883594,1884572-1888325
          Length = 1322

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +1

Query: 538  VGKQPR--KNYLQDHGWVKWQPLHDFLSSSFYNL 633
            VGK PR    YL++ GW  +QPL DF     Y++
Sbjct: 1287 VGK-PRVFDQYLEELGWPPYQPLWDFFGRYAYSV 1319


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,611,589
Number of Sequences: 37544
Number of extensions: 401188
Number of successful extensions: 751
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)