Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_D05
         (871 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70854-2|AAO91721.1|  575|Caenorhabditis elegans Hypothetical pr...   144   7e-35
U70854-1|AAB09146.1|  589|Caenorhabditis elegans Hypothetical pr...   144   7e-35

>U70854-2|AAO91721.1|  575|Caenorhabditis elegans Hypothetical
           protein F38A5.1b protein.
          Length = 575

 Score =  144 bits (349), Expect = 7e-35
 Identities = 72/169 (42%), Positives = 99/169 (58%), Gaps = 3/169 (1%)
 Frame = +1

Query: 148 GWGCGYRTLQTICSWLKLN-HMDVAVPSIREIQSILVDLEDKSKTFIGSRQWIGSFEVCL 324
           GWGC YR+ QTI SW  LN + D  VPS REIQ  LVD++DK   F+GSRQWIGS E+  
Sbjct: 404 GWGCAYRSFQTIWSWFILNGYTDKPVPSHREIQQALVDIQDKQAKFVGSRQWIGSTEISF 463

Query: 325 VIDKLFDVPCKIIHINKGDDLKTIVDALVKHFIEYSSPVMMGGDVDCSSKGIMGIHIGD- 501
           V+++L  + C+ I  N G ++   V  L +HF    +PVM+GG++   +  I+G+   D 
Sbjct: 464 VLNELLKLECRFIATNSGAEVVERVRELARHFETSGTPVMIGGNM--LAHTILGVDFNDT 521

Query: 502 -HGASLLVVDPHYVGKQPRKNYLQDHGWVKWQPLHDFLSSSFYNLCLPQ 645
                 LV+DPHY G +  K  +   GW  W+P   +    FYN+ LPQ
Sbjct: 522 TGETKFLVLDPHYTGSEDIKT-ITSKGWCAWKPASFWSKDHFYNMVLPQ 569


>U70854-1|AAB09146.1|  589|Caenorhabditis elegans Hypothetical
           protein F38A5.1a protein.
          Length = 589

 Score =  144 bits (349), Expect = 7e-35
 Identities = 72/169 (42%), Positives = 99/169 (58%), Gaps = 3/169 (1%)
 Frame = +1

Query: 148 GWGCGYRTLQTICSWLKLN-HMDVAVPSIREIQSILVDLEDKSKTFIGSRQWIGSFEVCL 324
           GWGC YR+ QTI SW  LN + D  VPS REIQ  LVD++DK   F+GSRQWIGS E+  
Sbjct: 418 GWGCAYRSFQTIWSWFILNGYTDKPVPSHREIQQALVDIQDKQAKFVGSRQWIGSTEISF 477

Query: 325 VIDKLFDVPCKIIHINKGDDLKTIVDALVKHFIEYSSPVMMGGDVDCSSKGIMGIHIGD- 501
           V+++L  + C+ I  N G ++   V  L +HF    +PVM+GG++   +  I+G+   D 
Sbjct: 478 VLNELLKLECRFIATNSGAEVVERVRELARHFETSGTPVMIGGNM--LAHTILGVDFNDT 535

Query: 502 -HGASLLVVDPHYVGKQPRKNYLQDHGWVKWQPLHDFLSSSFYNLCLPQ 645
                 LV+DPHY G +  K  +   GW  W+P   +    FYN+ LPQ
Sbjct: 536 TGETKFLVLDPHYTGSEDIKT-ITSKGWCAWKPASFWSKDHFYNMVLPQ 583


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,915,681
Number of Sequences: 27780
Number of extensions: 358550
Number of successful extensions: 845
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 839
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)