Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_D04
         (1014 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0710 + 27038709-27038865,27039205-27039346,27039383-270395...    32   0.84 
04_04_1556 - 34380013-34380021,34381175-34381271,34381570-343816...    29   4.5  

>03_05_0710 +
           27038709-27038865,27039205-27039346,27039383-27039558,
           27039639-27039703,27040000-27040371,27040429-27040504,
           27040505-27040571,27040672-27040825,27041122-27041289,
           27041392-27041502,27041612-27041722,27041864-27041881,
           27041917-27042018,27042587-27042817,27043390-27043464,
           27043744-27043815,27044597-27044782,27044868-27045026,
           27045251-27045343,27045730-27045801,27046336-27046426,
           27046669-27046847,27047252-27047333,27047526-27047636,
           27047715-27047821,27048194-27048271,27048357-27048452,
           27048627-27048722,27048839-27048856
          Length = 1154

 Score = 31.9 bits (69), Expect = 0.84
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +3

Query: 297 PSEKDLIIDDNEDFENDLSDMPKTRNIYDKQSD 395
           P+EK+L IDD EDFE++  +    R     QSD
Sbjct: 249 PTEKELTIDDIEDFEDEEDEFDSRRASRRHQSD 281


>04_04_1556 -
           34380013-34380021,34381175-34381271,34381570-34381631,
           34382072-34382163,34382387-34382420,34383434-34383496,
           34383951-34383966,34385694-34385783,34386253-34386596
          Length = 268

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 309 DLIIDDNEDFENDLSDMPKTRNIYDKQSDFQIKIKPDHL 425
           DL    N +F+N LS M +T  I  +     +++  DHL
Sbjct: 219 DLFFRTNNNFKNILSRMSETPGIMGQMPQLPVQVNEDHL 257


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,400,019
Number of Sequences: 37544
Number of extensions: 251721
Number of successful extensions: 382
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 382
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2987258700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)