Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_C18
         (899 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT009758-1|AAP88760.1|  577|Homo sapiens protein tyrosine phosph...    31   5.7  
BC089042-1|AAH89042.1| 1636|Homo sapiens protein tyrosine phosph...    31   5.7  
BC027711-1|AAH27711.2| 1320|Homo sapiens PTPN23 protein protein.       31   5.7  
BC004881-1|AAH04881.2|  619|Homo sapiens PTPN23 protein protein.       31   5.7  
AL110210-1|CAB53676.1|  990|Homo sapiens hypothetical protein pr...    31   5.7  
AF290614-1|AAK28025.1| 1636|Homo sapiens protein tyrosine phosph...    31   5.7  
AB025194-1|BAB19280.1| 1636|Homo sapiens protein tyrosine phosph...    31   5.7  

>BT009758-1|AAP88760.1|  577|Homo sapiens protein tyrosine
           phosphatase, non-receptor type 23 protein.
          Length = 577

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = -3

Query: 216 SSAPPSWSMRILASVTSLIRASDLQLRKKNNLTKYTNILE 97
           SS PPS S+ +LAS+T    + D  LR K  ++K+ N L+
Sbjct: 510 SSGPPSSSLELLASLTPEAFSLDSSLRGKQRMSKH-NFLQ 548


>BC089042-1|AAH89042.1| 1636|Homo sapiens protein tyrosine
            phosphatase, non-receptor type 23 protein.
          Length = 1636

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = -3

Query: 216  SSAPPSWSMRILASVTSLIRASDLQLRKKNNLTKYTNILE 97
            SS PPS S+ +LAS+T    + D  LR K  ++K+ N L+
Sbjct: 1569 SSGPPSSSLELLASLTPEAFSLDSSLRGKQRMSKH-NFLQ 1607


>BC027711-1|AAH27711.2| 1320|Homo sapiens PTPN23 protein protein.
          Length = 1320

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = -3

Query: 216  SSAPPSWSMRILASVTSLIRASDLQLRKKNNLTKYTNILE 97
            SS PPS S+ +LAS+T    + D  LR K  ++K+ N L+
Sbjct: 1253 SSGPPSSSLELLASLTPEAFSLDSSLRGKQRMSKH-NFLQ 1291


>BC004881-1|AAH04881.2|  619|Homo sapiens PTPN23 protein protein.
          Length = 619

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = -3

Query: 216 SSAPPSWSMRILASVTSLIRASDLQLRKKNNLTKYTNILE 97
           SS PPS S+ +LAS+T    + D  LR K  ++K+ N L+
Sbjct: 552 SSGPPSSSLELLASLTPEAFSLDSSLRGKQRMSKH-NFLQ 590


>AL110210-1|CAB53676.1|  990|Homo sapiens hypothetical protein
            protein.
          Length = 990

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = -3

Query: 216  SSAPPSWSMRILASVTSLIRASDLQLRKKNNLTKYTNILE 97
            SS PPS S+ +LAS+T    + D  LR K  ++K+ N L+
Sbjct: 923  SSGPPSSSLELLASLTPEAFSLDSSLRGKQRMSKH-NFLQ 961


>AF290614-1|AAK28025.1| 1636|Homo sapiens protein tyrosine phosphatase
            TD14 protein.
          Length = 1636

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = -3

Query: 216  SSAPPSWSMRILASVTSLIRASDLQLRKKNNLTKYTNILE 97
            SS PPS S+ +LAS+T    + D  LR K  ++K+ N L+
Sbjct: 1569 SSGPPSSSLELLASLTPEAFSLDSSLRGKQRMSKH-NFLQ 1607


>AB025194-1|BAB19280.1| 1636|Homo sapiens protein tyrosine phosphatase
            HD-PTP protein.
          Length = 1636

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = -3

Query: 216  SSAPPSWSMRILASVTSLIRASDLQLRKKNNLTKYTNILE 97
            SS PPS S+ +LAS+T    + D  LR K  ++K+ N L+
Sbjct: 1569 SSGPPSSSLELLASLTPEAFSLDSSLRGKQRMSKH-NFLQ 1607


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,665,747
Number of Sequences: 237096
Number of extensions: 2522311
Number of successful extensions: 4070
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4070
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)