Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_C13
(1437 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 44 4e-05
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 40 0.001
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 36 0.018
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 35 0.024
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.024
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 35 0.032
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 1.6
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 29 2.1
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 28 2.8
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 28 2.8
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 28 2.8
SPAC26A3.08 |smb1|smb|Sm snRNP core protein Smb1|Schizosaccharom... 27 4.8
SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr... 27 6.4
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 8.5
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 44.4 bits (100), Expect = 4e-05
Identities = 23/60 (38%), Positives = 24/60 (40%), Gaps = 6/60 (10%)
Frame = +2
Query: 1232 PPPPPXXXXGGXXPPPPXXXXXPPPPPXPXAXXGXXXXPPP------XXGPXPXPPXXPG 1393
PPPPP G P PP PPPPP P + PPP P PP PG
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPP-PRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPG 397
Score = 37.9 bits (84), Expect = 0.003
Identities = 18/41 (43%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +3
Query: 1233 PPPPPAXXXAA-XXPPPPXXXXXPPPPPXPXPXGGXXXPPP 1352
PPPPP AA P PP PPPPP PPP
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 37.5 bits (83), Expect = 0.005
Identities = 42/170 (24%), Positives = 44/170 (25%), Gaps = 7/170 (4%)
Frame = +1
Query: 949 PPPXGGXXXPPGGXXAX----PPXXGXPAXXPPXGXXXPPXRXGPXPPPPXXGAXXPRGG 1116
PP PP G + PP P PP PPPP A P G
Sbjct: 316 PPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSA--PSTG 373
Query: 1117 XXGGAXXGXXXXXGGGAXP-AXPXGGAPAXXXXXPRXXXAXXXXXXXGGRPXXPPPXXXX 1293
A P A P APA P + P PP
Sbjct: 374 RQPPPLSSSRAVSNPPAPPPAIPGRSAPALP---PLGNASRTSTPPVPTPPSLPPSAPPS 430
Query: 1294 XPP--PPPXPRXXXGXXGXPPPXXGAXAXXPXXPXGXXXXXXGPXPPPXP 1437
PP PP P PP A P P PPP P
Sbjct: 431 LPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 36.7 bits (81), Expect = 0.008
Identities = 35/133 (26%), Positives = 38/133 (28%), Gaps = 3/133 (2%)
Frame = +1
Query: 928 PPXXGAXPPPXGGXXXPPGGXXAXPPXXGXPAXXPPXGXXXPPXRXGPXPPPPXXGA--X 1101
PP + PPP P G P PP P R P PP +
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTS 413
Query: 1102 XPRGGXXGGAXXGXXXXXGGGAXPAXPXGGAPAXXXXXPRXXXAXXXXXXXGGRPXXPP- 1278
P A P+ P GAPA P A G P PP
Sbjct: 414 TPPVPTPPSLPPSAPPSLPPSAPPSLPM-GAPAAPPLPP---SAPIAPPLPAGMPAAPPL 469
Query: 1279 PXXXXXPPPPPXP 1317
P PPP P P
Sbjct: 470 PPAAPAPPPAPAP 482
Score = 35.5 bits (78), Expect = 0.018
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 3/53 (5%)
Frame = +2
Query: 1232 PPPPPXXXXGGXXPP---PPXXXXXPPPPPXPXAXXGXXXXPPPXXGPXPXPP 1381
PPPPP PP PPPPP P + PP P PP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPP 364
Score = 33.9 bits (74), Expect = 0.056
Identities = 21/70 (30%), Positives = 22/70 (31%), Gaps = 4/70 (5%)
Frame = +3
Query: 1233 PPPPPAXXXAAXXPPP----PXXXXXPPPPPXPXPXGGXXXPPPXXXGXXPXPRXXXGGX 1400
PPPPP PP PPPPP P P P P P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSA- 369
Query: 1401 XXXXGARPPP 1430
G +PPP
Sbjct: 370 -PSTGRQPPP 378
Score = 33.5 bits (73), Expect = 0.074
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = +2
Query: 1232 PPPPPXXXXGGXXPPPPXXXXXPPPPPXPXAXXGXXXXPPPXXGPXPXPPXXP 1390
PP P G PP P PP P PP P P P P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 30.3 bits (65), Expect = 0.69
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 1236 PPPPAXXXAAXXPPPPXXXXXPPPPPXPXPXGGXXXPPP 1352
PP P ++ P P PPP P P G PP
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPP 268
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/55 (29%), Positives = 17/55 (30%)
Frame = +2
Query: 1217 PXAXXPPPPPXXXXGGXXPPPPXXXXXPPPPPXPXAXXGXXXXPPPXXGPXPXPP 1381
P + PP P P P PPP P G PP P P P
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNG-TVSSPPNSPPRPIAP 277
Score = 27.9 bits (59), Expect = 3.7
Identities = 18/73 (24%), Positives = 19/73 (26%), Gaps = 2/73 (2%)
Frame = +2
Query: 1217 PXAXXPPPPPXXXXGGXXP--PPPXXXXXPPPPPXPXAXXGXXXXPPPXXGPXPXPPXXP 1390
P PP P P PP P PP P + P P PP P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 1391 GGXXXXXXGPXPP 1429
P P
Sbjct: 475 APPPAPAPAPAAP 487
Score = 27.1 bits (57), Expect = 6.4
Identities = 21/81 (25%), Positives = 22/81 (27%), Gaps = 5/81 (6%)
Frame = -2
Query: 1190 PPXGXAGXA---PPPXXXXXPXXAPPXXPPRGXXAPXXGGGGXGPXRXGGXXXP--XGGX 1026
PP G A P P P APP PP + G P P G
Sbjct: 404 PPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGM 463
Query: 1025 XAGXPXXGGXAXXPPGGXXXP 963
A P PP P
Sbjct: 464 PAAPPLPPAAPAPPPAPAPAP 484
Score = 26.6 bits (56), Expect = 8.5
Identities = 16/59 (27%), Positives = 16/59 (27%), Gaps = 1/59 (1%)
Frame = +2
Query: 1217 PXAXXPPPPPXXXXGGXXPP-PPXXXXXPPPPPXPXAXXGXXXXPPPXXGPXPXPPXXP 1390
P PPP PP PP P P PP P PP P
Sbjct: 370 PSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAP 428
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/61 (37%), Positives = 23/61 (37%), Gaps = 6/61 (9%)
Frame = +3
Query: 1233 PPPP------PAXXXAAXXPPPPXXXXXPPPPPXPXPXGGXXXPPPXXXGXXPXPRXXXG 1394
PPPP PA PP P PPPPP P G PPP P P G
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP-----PPPPAVSAG 788
Query: 1395 G 1397
G
Sbjct: 789 G 789
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/57 (36%), Positives = 21/57 (36%), Gaps = 5/57 (8%)
Frame = +2
Query: 1223 AXXPPPPPXXXXGGXXPPPP-----XXXXXPPPPPXPXAXXGXXXXPPPXXGPXPXP 1378
A P PPP GG PPPP PPPPP P G P P P
Sbjct: 747 APIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 39.1 bits (87), Expect = 0.001
Identities = 21/53 (39%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = +2
Query: 1217 PXAXXP-PPPPXXXXGGXXPPPPXXXXXPPPPPXPXAXXGXXXXPPPXXGPXP 1372
P P PPPP G PPPP PPPPP A P P P P
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPPP-----PPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 35.9 bits (79), Expect = 0.014
Identities = 20/50 (40%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = +3
Query: 1233 PPPPPAXXXAAXXPPPPXXXXXPPPPPXPXPXG-GXXXPPPXXXGXXPXP 1379
PPPPPA P P P PPP P G PPP G P P
Sbjct: 733 PPPPPAVIVPTPAPAP-----IPVPPPAPIMGGPPPPPPPPGVAGAGPPP 777
Score = 32.3 bits (70), Expect = 0.17
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Frame = +2
Query: 1271 PPPPXXXXXPPPPPXPXAXXGXXXXPPPXXG--PXPXPPXXPGGXXXXXXGPXPP 1429
PPPP P P P P P P G P P PP G P PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVP----PPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/50 (32%), Positives = 16/50 (32%), Gaps = 3/50 (6%)
Frame = +1
Query: 1297 PPPPPX---PRXXXGXXGXPPPXXGAXAXXPXXPXGXXXXXXGPXPPPXP 1437
PPPPP P PPP P P P PPP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.1 bits (62), Expect = 1.6
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = +1
Query: 1273 PPPXXXXXPPPPPXPRXXXGXXGXPPPXXGAXAXXPXXPXGXXXXXXGPXPPPXP 1437
P P P PPP P G PPP P P G P PPP P
Sbjct: 742 PTPAPAPIPVPPPAP-----IMGGPPP--------PPPPPGVAGAGPPPPPPPPP 783
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +1
Query: 949 PPPXGGXXXPPGGXXAXPPXXGXPAXXPPXGXXXPPXRXGPXPPPP 1086
PPP P P P P PP G PPPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 27.1 bits (57), Expect = 6.4
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = +3
Query: 1275 PPPXXXXXPPPPPXPXPXGGXXXPPPXXXGXXPXPRXXXGGXXXXXGARPPP 1430
PPP P P P P PP G P P G GA PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPI--PVPPPAPIMGGPPPPPPPPG----VAGAGPPP 777
Score = 26.6 bits (56), Expect = 8.5
Identities = 16/55 (29%), Positives = 16/55 (29%)
Frame = +1
Query: 949 PPPXGGXXXPPGGXXAXPPXXGXPAXXPPXGXXXPPXRXGPXPPPPXXGAXXPRG 1113
PPP P PP PP GP PPPP A G
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 35.5 bits (78), Expect = 0.018
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +3
Query: 1260 AAXXPPPPXXXXXPPPPPXPXPXGGXXXPPP 1352
+A PPPP PPP P P G PPP
Sbjct: 1703 SAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 31.5 bits (68), Expect = 0.30
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 1273 PPPXXXXXPPPPPXPRXXXGXXGXPPP 1353
PPP PPPP P G PPP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 31.1 bits (67), Expect = 0.39
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +2
Query: 1271 PPPPXXXXXPPPPPXPXAXXGXXXXPPPXXGPXPXPPXXP 1390
PPPP PPPP P G PPP P P P
Sbjct: 1707 PPPPPM-SVPPPPSAPPMPAGPPSAPPPPL-PASSAPSVP 1744
Score = 31.1 bits (67), Expect = 0.39
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +3
Query: 1233 PPPPPAXXXAAXXPPPPXXXXXPPPPPXP 1319
PPPP + PP P PPPP P
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +2
Query: 1280 PXXXXXPPPPPXPXAXXGXXXXPPPXXGPXPXPP 1381
P P PPP P + PP GP PP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 28.3 bits (60), Expect = 2.8
Identities = 17/62 (27%), Positives = 17/62 (27%), Gaps = 2/62 (3%)
Frame = +1
Query: 916 PXXGPPXX--GAXPPPXGGXXXPPGGXXAXPPXXGXPAXXPPXGXXXPPXRXGPXPPPPX 1089
P PP A PP PP PP P P PP P P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPN 1745
Query: 1090 XG 1095
G
Sbjct: 1746 PG 1747
Score = 27.9 bits (59), Expect = 3.7
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +3
Query: 1242 PPAXXXAAXXPPPPXXXXXPPPPPXPXPXGGXXXPPPXXXGXXPXP 1379
PP +A PP PPPPP P P P P P
Sbjct: 1690 PPVRPQSAA--PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 26.6 bits (56), Expect = 8.5
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 2/46 (4%)
Frame = +2
Query: 1223 AXXPPPPPXXXXGGXXPP--PPXXXXXPPPPPXPXAXXGXXXXPPP 1354
A PPPPP PP PP P PP P P P
Sbjct: 1704 APTPPPPPMSVP---PPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 35.1 bits (77), Expect = 0.024
Identities = 26/74 (35%), Positives = 26/74 (35%)
Frame = -1
Query: 1437 GXRGGXGPXXXXXXPPGXXGGXGXGPXXGGGXXXXPXXAXGXGGGGGXXXXXGGGGXXPP 1258
G GG G G GG G GP GG G GG GG GGG P
Sbjct: 205 GGFGGFGGFGGEGHHHGGHGGFGGGP--GGFEGGPGGFGGGPGGFGGGLGGFGGG----P 258
Query: 1257 XXXXGGGGGXXAXG 1216
GG GG G
Sbjct: 259 GGFGGGPGGHGGPG 272
Score = 31.9 bits (69), Expect = 0.22
Identities = 26/74 (35%), Positives = 26/74 (35%)
Frame = -1
Query: 1437 GXRGGXGPXXXXXXPPGXXGGXGXGPXXGGGXXXXPXXAXGXGGGGGXXXXXGGGGXXPP 1258
G GG G PPG G G G G G G GG GG GG G P
Sbjct: 188 GGFGGFG-GGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFG-GGPGGFEGGPGGFGGGP- 244
Query: 1257 XXXXGGGGGXXAXG 1216
GGG G G
Sbjct: 245 -GGFGGGLGGFGGG 257
Score = 28.3 bits (60), Expect = 2.8
Identities = 24/79 (30%), Positives = 24/79 (30%), Gaps = 2/79 (2%)
Frame = -2
Query: 1085 GGGGXGPXRXGGXXXPXGGXXAGXPXXGGXA--XXPPGGXXXPPXGGGXAPXXGGPXXGX 912
GGG GP G GG GG PGG P G G P GG G
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGP--GGFGGGL 251
Query: 911 PXXXAXPXXPGAXRGXXPG 855
P G G G
Sbjct: 252 GGFGGGPGGFGGGPGGHGG 270
Score = 28.3 bits (60), Expect = 2.8
Identities = 20/63 (31%), Positives = 20/63 (31%), Gaps = 2/63 (3%)
Frame = -2
Query: 1106 GXXAPXXGGGGXGPXRXGGXXXPXGGXXAGXPXXGGXAXXPPGGXXXPP--XGGGXAPXX 933
G P G GG G G G G G PGG P GGG
Sbjct: 196 GSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFG 255
Query: 932 GGP 924
GGP
Sbjct: 256 GGP 258
Score = 26.6 bits (56), Expect = 8.5
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 1317 GXGGGGGXXXXXGGGGXXPPXXXXGGGGGXXAXG 1216
G GGG G GG P GG GG G
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEG 217
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.1 bits (77), Expect = 0.024
Identities = 40/180 (22%), Positives = 45/180 (25%), Gaps = 11/180 (6%)
Frame = +1
Query: 931 PXXGAXPP-PXGGXXXPPGGXXAXPPXXGXPAXXPPXGXXXPPXRXGPXPPPPXXGAXXP 1107
P + PP P P P P+ P G P G PP P P
Sbjct: 1044 PIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGI-PPVPKPSVAAP 1102
Query: 1108 RGGXXGGAXXGXXXXXGGGAXP----AXPXGGAPAXXXXXPRXXXAXXXXXXXGGRPXXP 1275
A G P A P P+ P+ A G P P
Sbjct: 1103 PVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVP 1162
Query: 1276 PPXXXXXPPP------PPXPRXXXGXXGXPPPXXGAXAXXPXXPXGXXXXXXGPXPPPXP 1437
P P P PP P+ G PPP P P P P
Sbjct: 1163 KPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 31.1 bits (67), Expect = 0.39
Identities = 21/71 (29%), Positives = 23/71 (32%), Gaps = 4/71 (5%)
Frame = +3
Query: 1230 GPPPPPAXXXAAXXPPPPXXXXXPPPPP---XPXPXGGXXXPP-PXXXGXXPXPRXXXGG 1397
G PP P AA P P P P P P P PP P G P P+
Sbjct: 1090 GIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAA 1149
Query: 1398 XXXXXGARPPP 1430
+ PP
Sbjct: 1150 PPVPAPSGAPP 1160
Score = 30.7 bits (66), Expect = 0.52
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +3
Query: 1236 PPPPAXXXAAXXPPPPXXXXXPPPPPXPXPXGGXXXPPPXXXGXXPXP 1379
PP P A PPP P P P G P P P P
Sbjct: 1050 PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKP 1097
Score = 30.3 bits (65), Expect = 0.69
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 6/56 (10%)
Frame = +2
Query: 1241 PPXXXXGGXXPPPPXXXXXPP------PPPXPXAXXGXXXXPPPXXGPXPXPPXXP 1390
PP PP P PP PP P + G PPP P P P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIP 1077
Score = 30.3 bits (65), Expect = 0.69
Identities = 20/57 (35%), Positives = 20/57 (35%), Gaps = 7/57 (12%)
Frame = +3
Query: 1230 GPPPPPAXXXAAXXPPPPXXXXXPP-------PPPXPXPXGGXXXPPPXXXGXXPXP 1379
G PP P AA PP P PP PP P P G P G P P
Sbjct: 1138 GAPPVPKPSVAA--PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVP 1192
Score = 30.3 bits (65), Expect = 0.69
Identities = 25/103 (24%), Positives = 26/103 (25%), Gaps = 4/103 (3%)
Frame = +1
Query: 811 AAPGXGPXGGXXPXXPGXXPRXAPGXXGXAXXXGXPXXG----PPXXGAXPPPXGGXXXP 978
A P P G P P P G PP A P P P
Sbjct: 1149 APPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVP 1208
Query: 979 PGGXXAXPPXXGXPAXXPPXGXXXPPXRXGPXPPPPXXGAXXP 1107
P PP P P G P PP P + P
Sbjct: 1209 P----VPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAP 1247
Score = 30.3 bits (65), Expect = 0.69
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = +2
Query: 1241 PPXXXXGGXXPPPPXXXXXPPPPPXPXAXXGXXXXPPPXXGPXPXPP 1381
PP G PP P PP P P + G P P G P PP
Sbjct: 1150 PPVPAPSGA-PPVPKPSVAAPPVPAPSS--GIPPVPKPAAGVPPVPP 1193
Score = 30.3 bits (65), Expect = 0.69
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 3/57 (5%)
Frame = +2
Query: 1217 PXAXXPPPPPXXXXGGXXPPPPXXXXXPPP---PPXPXAXXGXXXXPPPXXGPXPXP 1378
P A PP PP P PPP PP P G P P P P
Sbjct: 1184 PAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
Score = 28.7 bits (61), Expect = 2.1
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +2
Query: 1235 PPPPXXXXGGXXPPPPXXXXXPPPPPXPXAXXGXXXXPPPXXGPXPXPPXXPG 1393
PP P G PPP PP P G PPP P P P G
Sbjct: 1179 PPVPKPAAGVPPVPPPSEA-----PPVPKPSVGVPPVPPPSTAP-PVPTPSAG 1225
Score = 27.9 bits (59), Expect = 3.7
Identities = 17/53 (32%), Positives = 17/53 (32%), Gaps = 4/53 (7%)
Frame = +3
Query: 1233 PPPPPAXXXAAXXPPPPXXXXXPPP----PPXPXPXGGXXXPPPXXXGXXPXP 1379
PP P PPP P P PP P P P P G P P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP-SAGLPPVP 1230
Score = 27.9 bits (59), Expect = 3.7
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +2
Query: 1217 PXAXXPPPPPXXXXGGXXPPPPXXXXXPPPPPXPXAXXGXXXXPPPXXGPXPXP 1378
P PP P G PPP PP P P A P P P P
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPSTA---PPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 27.5 bits (58), Expect = 4.8
Identities = 17/54 (31%), Positives = 17/54 (31%), Gaps = 6/54 (11%)
Frame = +3
Query: 1236 PPPPAXXXAAXXPPPPXXXXXPPPPPXPXP------XGGXXXPPPXXXGXXPXP 1379
PP PA P P P PPP P G PPP P P
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 27.5 bits (58), Expect = 4.8
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 3/32 (9%)
Frame = +3
Query: 1233 PPP---PPAXXXAAXXPPPPXXXXXPPPPPXP 1319
PPP PP +A PP P PP P P
Sbjct: 1211 PPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 26.6 bits (56), Expect = 8.5
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = -3
Query: 943 PPXGGXPPPXXPGXXXXPXXPXPXGGXXXXXXXXXXXPAPXPXRRXAPXXXXGXGXPPRR 764
P G PP P P P P G P P P P G PP
Sbjct: 1134 PVPSGAPPVPKPSVAAPPV-PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP-- 1190
Query: 763 AXPPP 749
PPP
Sbjct: 1191 -VPPP 1194
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 34.7 bits (76), Expect = 0.032
Identities = 22/74 (29%), Positives = 22/74 (29%), Gaps = 3/74 (4%)
Frame = +2
Query: 1217 PXAXXPPPPPXXXXGGXXPPPP---XXXXXPPPPPXPXAXXGXXXXPPPXXGPXPXPPXX 1387
P PPPP G PPPP PPPP PP P P
Sbjct: 203 PGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 262
Query: 1388 PGGXXXXXXGPXPP 1429
P P PP
Sbjct: 263 PMHHEPGEHMPPPP 276
Score = 34.7 bits (76), Expect = 0.032
Identities = 22/74 (29%), Positives = 22/74 (29%), Gaps = 3/74 (4%)
Frame = +2
Query: 1217 PXAXXPPPPPXXXXGGXXPPPP---XXXXXPPPPPXPXAXXGXXXXPPPXXGPXPXPPXX 1387
P PPPP G PPPP PPPP PP P P
Sbjct: 242 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 301
Query: 1388 PGGXXXXXXGPXPP 1429
P P PP
Sbjct: 302 PMHHEPGEHMPPPP 315
Score = 32.3 bits (70), Expect = 0.17
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 2/48 (4%)
Frame = +2
Query: 1217 PXAXXPPPPPXXXXGGXXPPPPXXXXXPP--PPPXPXAXXGXXXXPPP 1354
P PPPP G PPPP PPP G PPP
Sbjct: 281 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 32.3 bits (70), Expect = 0.17
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 2/48 (4%)
Frame = +2
Query: 1217 PXAXXPPPPPXXXXGGXXPPPPXXXXXPP--PPPXPXAXXGXXXXPPP 1354
P PPPP G PPPP PPP G PPP
Sbjct: 294 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
Score = 31.1 bits (67), Expect = 0.39
Identities = 22/74 (29%), Positives = 22/74 (29%), Gaps = 3/74 (4%)
Frame = +2
Query: 1217 PXAXXPPPPPXXXXGGXXPPPPXXXXXPPP-PPXPXAXXGXXXXPPPX--XGPXPXPPXX 1387
P PPPP G PPPP PP P PPP P P
Sbjct: 229 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 288
Query: 1388 PGGXXXXXXGPXPP 1429
P P PP
Sbjct: 289 PMHHEPGEHMPPPP 302
Score = 31.1 bits (67), Expect = 0.39
Identities = 22/74 (29%), Positives = 22/74 (29%), Gaps = 3/74 (4%)
Frame = +2
Query: 1217 PXAXXPPPPPXXXXGGXXPPPPXXXXXPPP-PPXPXAXXGXXXXPPPX--XGPXPXPPXX 1387
P PPPP G PPPP PP P PPP P P
Sbjct: 268 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 327
Query: 1388 PGGXXXXXXGPXPP 1429
P P PP
Sbjct: 328 PMHHEPGEHMPPPP 341
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 309
Score = 29.1 bits (62), Expect = 1.6
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3
Query: 1233 PPPPPAXXXAAXXPPPP 1283
PPPPPA AA P PP
Sbjct: 6 PPPPPAPAPAAAAPAPP 22
Score = 28.7 bits (61), Expect = 2.1
Identities = 14/49 (28%), Positives = 14/49 (28%)
Frame = +3
Query: 1233 PPPPPAXXXAAXXPPPPXXXXXPPPPPXPXPXGGXXXPPPXXXGXXPXP 1379
PPP PA PP PPP P P P P
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
Score = 27.1 bits (57), Expect = 6.4
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 1299 PPPPPXPXPXGGXXXPP 1349
PPPPP P P PP
Sbjct: 6 PPPPPAPAPAAAAPAPP 22
Score = 27.1 bits (57), Expect = 6.4
Identities = 15/58 (25%), Positives = 15/58 (25%)
Frame = +2
Query: 1217 PXAXXPPPPPXXXXGGXXPPPPXXXXXPPPPPXPXAXXGXXXXPPPXXGPXPXPPXXP 1390
P PPP P PP PPP P P PP P
Sbjct: 145 PRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVP 202
Score = 26.6 bits (56), Expect = 8.5
Identities = 16/56 (28%), Positives = 16/56 (28%), Gaps = 3/56 (5%)
Frame = +1
Query: 928 PPXXGAXPPPXGGXXXPPGGXXAXPPXXGXPAXXPPXGXXXP---PXRXGPXPPPP 1086
PP A PP P P P PP P P PPPP
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 28.7 bits (61), Expect = 2.1
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +1
Query: 943 AXPPPXGGXXXPPGGXXAXPPXXGXPAXXPPXGXXXPPXRXGPXPPPPXXG 1095
A PPP P G + P P PP G G P P G
Sbjct: 1880 AAPPPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNPGMPAPVPLTG 1930
Score = 26.6 bits (56), Expect = 8.5
Identities = 15/46 (32%), Positives = 15/46 (32%), Gaps = 2/46 (4%)
Frame = +2
Query: 1223 AXXPPPPPXXXXGGXXPPPPXXXXXPP--PPPXPXAXXGXXXXPPP 1354
A PPPPP P PP PP A G P P
Sbjct: 1880 AAPPPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNPGMPAP 1925
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein Lsb1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 28.3 bits (60), Expect = 2.8
Identities = 13/44 (29%), Positives = 15/44 (34%)
Frame = +1
Query: 949 PPPXGGXXXPPGGXXAXPPXXGXPAXXPPXGXXXPPXRXGPXPP 1080
PPP PP + PP PP PP + P P
Sbjct: 207 PPPPPQQNYPPAASSSAPPMQYQQTAYPPQQAPYPPVQAYPQAP 250
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.3 bits (60), Expect = 2.8
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +2
Query: 1217 PXAXXPPPPPXXXXGGXXPPPPXXXXXPPPPPXP 1318
P PPPPP G PP PPPPP P
Sbjct: 5 PPGNPPPPPPPP---GFEPP-----SQPPPPPPP 30
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 1278 PPXXXXXPPPPPXPXPXGGXXXPPP 1352
PP PPPPP P PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 27.9 bits (59), Expect = 3.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 1272 PPPPXXXXXPPPPPXPXPXG 1331
PPPP P PP P P G
Sbjct: 12 PPPPPGFEPPSQPPPPPPPG 31
Score = 27.5 bits (58), Expect = 4.8
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3
Query: 1233 PPPPPAXXXAAXXPPPP 1283
PPPPP + PPPP
Sbjct: 12 PPPPPGFEPPSQPPPPP 28
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/20 (55%), Positives = 11/20 (55%), Gaps = 2/20 (10%)
Frame = +3
Query: 1272 PPPPXXXXXPP--PPPXPXP 1325
PPPP PP PPP P P
Sbjct: 11 PPPPPPGFEPPSQPPPPPPP 30
Score = 26.6 bits (56), Expect = 8.5
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1
Query: 1000 PPXXGXPAXXPPXGXXXPPXRXGPXPPP 1083
PP G P PP PP + P PPP
Sbjct: 5 PP--GNPPPPPPPPGFEPPSQPPPPPPP 30
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 28.3 bits (60), Expect = 2.8
Identities = 20/56 (35%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Frame = -1
Query: 1392 PGXXGGXGXGPXXGGGXXXXPXXAXGXGGGGGXXXXXGG--GGXXPPXXXXGGGGG 1231
PG GG G G G G G G GG GG GG GG GG
Sbjct: 5 PGSRGGRG-GSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGG 59
Score = 27.5 bits (58), Expect = 4.8
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = -1
Query: 1389 GXXGGXGXGPXXGGGXXXXPXXAXGXGGGGGXXXXXGGGGXXPPXXXXGGGGGXXAXG 1216
G GG G GG A G G GG G GG GG G G
Sbjct: 13 GSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
>SPAC26A3.08 |smb1|smb|Sm snRNP core protein Smb1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 147
Score = 27.5 bits (58), Expect = 4.8
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = +1
Query: 925 GPPXXGAXPPPXGGXXXPPGGXXAXPPXXGXPAXXPPXGXXXPPXRXGPXPPPPXXG 1095
GPP P G PG A P G P P G P G PPP G
Sbjct: 82 GPPPMD--PSMRGSLLSGPG--VARPAGRGIPLGQAPVGLAGPVRGVGYTAPPPPAG 134
>SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 172
Score = 27.1 bits (57), Expect = 6.4
Identities = 14/49 (28%), Positives = 15/49 (30%)
Frame = +1
Query: 994 AXPPXXGXPAXXPPXGXXXPPXRXGPXPPPPXXGAXXPRGGXXGGAXXG 1140
A PP PA PP P P P P GG+ G
Sbjct: 8 APPPRRAAPARSASTAAALPPRTMAPPPAPSRVQQAPPPTAVQGGSSPG 56
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 8.5
Identities = 13/38 (34%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Frame = +2
Query: 1217 PXAXXPPPPPXXXXGGXXPPP--PXXXXXPPPPPXPXA 1324
P + PPP P P PPPPP P A
Sbjct: 161 PNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPPPA 198
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.309 0.151 0.536
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,514,039
Number of Sequences: 5004
Number of extensions: 45224
Number of successful extensions: 621
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 264
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 800832734
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
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