Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_C12
         (909 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              44   2e-06
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    26   0.54 
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    24   2.2  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    22   8.9  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   8.9  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   8.9  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   8.9  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 44.0 bits (99), Expect = 2e-06
 Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = +3

Query: 405 PCLKVHCSAGRVCEINEHGD-AMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 578
           PC   +C  G+ CE++ +   A+C C++ CP      R VC +  + + + CE++R  C
Sbjct: 81  PCASKYCGIGKECELSPNSTIAVCVCMRKCPRR---HRPVCASNGKIYANHCELHRAAC 136


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 25.8 bits (54), Expect = 0.54
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +3

Query: 435 RVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNET 542
           +VC    H D+ C C+       DS   V  NFNE+
Sbjct: 344 QVCRSRRHSDSCCLCL-------DSMNAVIRNFNES 372


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 10/33 (30%), Positives = 14/33 (42%)
 Frame = +3

Query: 426 SAGRVCEINEHGDAMCNCIKDCPYETDSRRMVC 524
           + G  C   EH       + DC  E  +RR +C
Sbjct: 296 TTGTKCVSGEHLSVSGGALNDCHAEVVARRCLC 328


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 12/55 (21%), Positives = 25/55 (45%)
 Frame = +3

Query: 705 MRDWLFNIMRDMAERRELTPHYLKMEREAESNLTRRWANAAIWKWCDLDAQTNDR 869
           M  WL  ++      +++T   +  +R++ +NL         WK  D D  +++R
Sbjct: 1   MTKWLLLVVCLGIACQDVTSAAVNHQRKSANNLAHSMKVIYEWKHIDFDFGSDER 55


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 755 LSTFSHVAHDVKKPVPHATGEVRH 684
           +++FSH + DVK  +  ATG   H
Sbjct: 276 IASFSHRSIDVKDGIVLATGITVH 299


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 636 EYYGTCREMPDCTESEMSDFPRRMRD 713
           +Y    + MPD  E+E+SD    +RD
Sbjct: 74  QYARVQQSMPDGWETEISDQMLELRD 99


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 755 LSTFSHVAHDVKKPVPHATGEVRH 684
           +++FSH + DVK  +  ATG   H
Sbjct: 276 IASFSHRSIDVKDGIVLATGITVH 299


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 239,843
Number of Sequences: 438
Number of extensions: 5136
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29509116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)