Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_C06
(895 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 24 2.2
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 24 2.2
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 24 2.2
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.8
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.8
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 23 2.8
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 23 3.8
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 22 6.6
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 22 8.7
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 22 8.7
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 22 8.7
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 22 8.7
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 22 8.7
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 23.8 bits (49), Expect = 2.2
Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -2
Query: 837 KIVATNLKNNLLITNSW--PNCNIFYIKFGECDF 742
+++ NLKN ++ TN W N + +K+ D+
Sbjct: 56 QLIDVNLKNQIMTTNVWVEQEWNDYKLKWNPDDY 89
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 23.8 bits (49), Expect = 2.2
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -2
Query: 840 LKIVATNLKNNLLITNSW 787
++I+ + KN LLITN W
Sbjct: 58 MQIIDVDEKNQLLITNLW 75
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 23.8 bits (49), Expect = 2.2
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +1
Query: 421 QENISLQYFYHDL-FEI*FVYGIKLIIICTV 510
++N+ + Y D + I F Y I LI++CTV
Sbjct: 802 EDNLLVCNSYVDASYMIAFAYPIMLIVVCTV 832
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.4 bits (48), Expect = 2.8
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -2
Query: 837 KIVATNLKNNLLITNSW 787
+++ NLKN ++ TN W
Sbjct: 64 QLIDVNLKNQIMTTNLW 80
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.4 bits (48), Expect = 2.8
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -2
Query: 837 KIVATNLKNNLLITNSW 787
+++ NLKN ++ TN W
Sbjct: 64 QLIDVNLKNQIMTTNLW 80
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 23.4 bits (48), Expect = 2.8
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -2
Query: 837 KIVATNLKNNLLITNSW 787
+++ NLKN ++ TN W
Sbjct: 60 QLIDVNLKNQIMTTNLW 76
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 23.0 bits (47), Expect = 3.8
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -2
Query: 837 KIVATNLKNNLLITNSW 787
+++ NLKN ++ TN W
Sbjct: 69 QLIEMNLKNQVMTTNVW 85
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 22.2 bits (45), Expect = 6.6
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -2
Query: 306 HLHQVKLHKRDNKHTFQRVWRDAQ 235
++ +VK K +KH Q W D +
Sbjct: 325 YIPKVKNKKAGSKHLLQNTWLDPE 348
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 21.8 bits (44), Expect = 8.7
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -2
Query: 753 ECDFEFFFITNKSFLINLSNPSL 685
ECD F ITN S +SNP +
Sbjct: 172 ECDHVQFLITNTSGPGVVSNPMI 194
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.8 bits (44), Expect = 8.7
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -2
Query: 837 KIVATNLKNNLLITNSW 787
+++ NLK+ +L TN W
Sbjct: 56 QLIDLNLKDQILTTNVW 72
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 21.8 bits (44), Expect = 8.7
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = +3
Query: 225 PKNTEHRARHAGKCACCPACVTLLGEGATCKIYSKELGETPSAV 356
P N A A KCA L E A C+ K + +P V
Sbjct: 153 PMNRNRPAYLASKCALTTLTDCLRSELAQCESNIKVISISPDLV 196
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 21.8 bits (44), Expect = 8.7
Identities = 7/27 (25%), Positives = 16/27 (59%)
Frame = +3
Query: 87 VFKNFKMKTLIFIMLVACVASAAYGAL 167
+FK FK + +++++ AC+ + L
Sbjct: 431 LFKTFKDRKYLYMLMEACLGGELWTVL 457
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 21.8 bits (44), Expect = 8.7
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -2
Query: 753 ECDFEFFFITNKSFLINLSNPSL 685
ECD F ITN S +SNP +
Sbjct: 172 ECDHVQFLITNTSGPGVVSNPMI 194
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 241,274
Number of Sequences: 438
Number of extensions: 5231
Number of successful extensions: 19
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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