SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_C05
         (865 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC037798-1|AAH37798.1|  176|Homo sapiens TPPP3 protein protein.       115   2e-25
BC000691-1|AAH00691.1|  176|Homo sapiens brain specific protein ...   115   2e-25
AF132972-1|AAD27747.1|  176|Homo sapiens CGI-38 protein protein.      115   2e-25
BT020035-1|AAV38838.1|  219|Homo sapiens brain-specific protein ...   106   9e-23
BC131506-1|AAI31507.1|  219|Homo sapiens tubulin polymerization ...   106   9e-23
BC040496-1|AAH40496.1|  234|Homo sapiens TPPP protein protein.        106   9e-23
AY319261-1|AAQ96657.1|  219|Homo sapiens fibroblast growth facto...   106   9e-23
AB017016-1|BAA36164.1|  219|Homo sapiens p25 alpha protein.           106   9e-23
BC038970-1|AAH38970.1|  170|Homo sapiens tubulin polymerization-...   102   2e-21
AY173946-1|AAO49716.1|  170|Homo sapiens brain-specific protein ...   102   2e-21
AY072034-1|AAL62338.1|  170|Homo sapiens p25 beta protein.            102   2e-21
D87440-1|BAA13382.2|  702|Homo sapiens KIAA0252 protein.               33   1.0  
BC015052-1|AAH15052.1|  585|Homo sapiens Rtf1, Paf1/RNA polymera...    33   1.0  

>BC037798-1|AAH37798.1|  176|Homo sapiens TPPP3 protein protein.
          Length = 176

 Score =  115 bits (277), Expect = 2e-25
 Identities = 66/147 (44%), Positives = 91/147 (61%), Gaps = 9/147 (6%)
 Frame = +3

Query: 360 GDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKF---LD 530
           GDPK+ G+ +      K  K  KV DGK +T TD  I F K+K     + +Y++F   L+
Sbjct: 21  GDPKASGQEMNGKNWAKLCKDCKVADGKSVTGTDVDIVFSKVKGKSARVINYEEFKKALE 80

Query: 531 DLA------KNKKVELDEIKKKLTTCGQPGITSHVTKSPAAAAAVDRLTDTSKYTGSHRQ 692
           +LA      K+K+   D I + +   G+      VTK+    A VDRLTDTS+YTGSH++
Sbjct: 81  ELATKRFKGKSKEEAFDAICQLVA--GKEPANVGVTKAKTGGA-VDRLTDTSRYTGSHKE 137

Query: 693 RFDETGKGKGIAGRKDLVDGSGYVTGY 773
           RFDE+GKGKGIAGR+D++D SGYV+ Y
Sbjct: 138 RFDESGKGKGIAGRQDILDDSGYVSAY 164


>BC000691-1|AAH00691.1|  176|Homo sapiens brain specific protein
           protein.
          Length = 176

 Score =  115 bits (277), Expect = 2e-25
 Identities = 66/147 (44%), Positives = 91/147 (61%), Gaps = 9/147 (6%)
 Frame = +3

Query: 360 GDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKF---LD 530
           GDPK+ G+ +      K  K  KV DGK +T TD  I F K+K     + +Y++F   L+
Sbjct: 21  GDPKASGQEMNGKNWAKLCKDCKVADGKSVTGTDVDIVFSKVKGKSARVINYEEFKKALE 80

Query: 531 DLA------KNKKVELDEIKKKLTTCGQPGITSHVTKSPAAAAAVDRLTDTSKYTGSHRQ 692
           +LA      K+K+   D I + +   G+      VTK+    A VDRLTDTS+YTGSH++
Sbjct: 81  ELATKRFKGKSKEEAFDAICQLVA--GKEPANVGVTKAKTGGA-VDRLTDTSRYTGSHKE 137

Query: 693 RFDETGKGKGIAGRKDLVDGSGYVTGY 773
           RFDE+GKGKGIAGR+D++D SGYV+ Y
Sbjct: 138 RFDESGKGKGIAGRQDILDDSGYVSAY 164


>AF132972-1|AAD27747.1|  176|Homo sapiens CGI-38 protein protein.
          Length = 176

 Score =  115 bits (277), Expect = 2e-25
 Identities = 66/147 (44%), Positives = 91/147 (61%), Gaps = 9/147 (6%)
 Frame = +3

Query: 360 GDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKF---LD 530
           GDPK+ G+ +      K  K  KV DGK +T TD  I F K+K     + +Y++F   L+
Sbjct: 21  GDPKASGQEMNGKNWAKLCKDCKVADGKSVTGTDVDIVFSKVKGKSARVINYEEFKKALE 80

Query: 531 DLA------KNKKVELDEIKKKLTTCGQPGITSHVTKSPAAAAAVDRLTDTSKYTGSHRQ 692
           +LA      K+K+   D I + +   G+      VTK+    A VDRLTDTS+YTGSH++
Sbjct: 81  ELATKRFQGKSKEEAFDAICQLVA--GKEPANVGVTKAKTGGA-VDRLTDTSRYTGSHKE 137

Query: 693 RFDETGKGKGIAGRKDLVDGSGYVTGY 773
           RFDE+GKGKGIAGR+D++D SGYV+ Y
Sbjct: 138 RFDESGKGKGIAGRQDILDDSGYVSAY 164


>BT020035-1|AAV38838.1|  219|Homo sapiens brain-specific protein p25
           alpha protein.
          Length = 219

 Score =  106 bits (255), Expect = 9e-23
 Identities = 61/145 (42%), Positives = 89/145 (61%), Gaps = 7/145 (4%)
 Frame = +3

Query: 360 GDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVK---LGIDDYQKFLD 530
           GD ++ G+ +      K  K  +VIDG+ +T TD  I F K+K      +  + +Q+ L+
Sbjct: 62  GDARATGREMHGKNWSKLCKDCQVIDGRNVTVTDVDIVFSKIKGKSCRTITFEQFQEALE 121

Query: 531 DLAKN--KKVELDEIKKKLTTC--GQPGITSHVTKSPAAAAAVDRLTDTSKYTGSHRQRF 698
           +LAK   K    +E  +++     G+  I S VTK+  ++  V RLTDT+K+TGSH++RF
Sbjct: 122 ELAKKRFKDKSSEEAVREVHRLIEGKAPIISGVTKA-ISSPTVSRLTDTTKFTGSHKERF 180

Query: 699 DETGKGKGIAGRKDLVDGSGYVTGY 773
           D +GKGKG AGR DLVD SGYV+GY
Sbjct: 181 DPSGKGKGKAGRVDLVDESGYVSGY 205


>BC131506-1|AAI31507.1|  219|Homo sapiens tubulin polymerization
           promoting protein protein.
          Length = 219

 Score =  106 bits (255), Expect = 9e-23
 Identities = 61/145 (42%), Positives = 89/145 (61%), Gaps = 7/145 (4%)
 Frame = +3

Query: 360 GDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVK---LGIDDYQKFLD 530
           GD ++ G+ +      K  K  +VIDG+ +T TD  I F K+K      +  + +Q+ L+
Sbjct: 62  GDARATGREMHGKNWSKLCKDCQVIDGRNVTVTDVDIVFSKIKGKSCRTITFEQFQEALE 121

Query: 531 DLAKN--KKVELDEIKKKLTTC--GQPGITSHVTKSPAAAAAVDRLTDTSKYTGSHRQRF 698
           +LAK   K    +E  +++     G+  I S VTK+  ++  V RLTDT+K+TGSH++RF
Sbjct: 122 ELAKKRFKDKSSEEAVREVHRLIEGKAPIISGVTKA-ISSPTVSRLTDTTKFTGSHKERF 180

Query: 699 DETGKGKGIAGRKDLVDGSGYVTGY 773
           D +GKGKG AGR DLVD SGYV+GY
Sbjct: 181 DPSGKGKGKAGRVDLVDESGYVSGY 205


>BC040496-1|AAH40496.1|  234|Homo sapiens TPPP protein protein.
          Length = 234

 Score =  106 bits (255), Expect = 9e-23
 Identities = 61/145 (42%), Positives = 89/145 (61%), Gaps = 7/145 (4%)
 Frame = +3

Query: 360 GDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVK---LGIDDYQKFLD 530
           GD ++ G+ +      K  K  +VIDG+ +T TD  I F K+K      +  + +Q+ L+
Sbjct: 77  GDARATGREMHGKNWSKLCKDCQVIDGRNVTVTDVDIVFSKIKGKSCRTITFEQFQEALE 136

Query: 531 DLAKN--KKVELDEIKKKLTTC--GQPGITSHVTKSPAAAAAVDRLTDTSKYTGSHRQRF 698
           +LAK   K    +E  +++     G+  I S VTK+  ++  V RLTDT+K+TGSH++RF
Sbjct: 137 ELAKKRFKDKSSEEAVREVHRLIEGKAPIISGVTKA-ISSPTVSRLTDTTKFTGSHKERF 195

Query: 699 DETGKGKGIAGRKDLVDGSGYVTGY 773
           D +GKGKG AGR DLVD SGYV+GY
Sbjct: 196 DPSGKGKGKAGRVDLVDESGYVSGY 220


>AY319261-1|AAQ96657.1|  219|Homo sapiens fibroblast growth factor-2
           repression protein-1 protein.
          Length = 219

 Score =  106 bits (255), Expect = 9e-23
 Identities = 61/145 (42%), Positives = 89/145 (61%), Gaps = 7/145 (4%)
 Frame = +3

Query: 360 GDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVK---LGIDDYQKFLD 530
           GD ++ G+ +      K  K  +VIDG+ +T TD  I F K+K      +  + +Q+ L+
Sbjct: 62  GDARATGREMHGKNWSKLCKDCQVIDGRNVTVTDVDIVFSKIKGKSCRTITFEQFQEALE 121

Query: 531 DLAKN--KKVELDEIKKKLTTC--GQPGITSHVTKSPAAAAAVDRLTDTSKYTGSHRQRF 698
           +LAK   K    +E  +++     G+  I S VTK+  ++  V RLTDT+K+TGSH++RF
Sbjct: 122 ELAKKRFKDKSSEEAVREVHRLIEGKAPIISGVTKA-ISSPTVSRLTDTTKFTGSHKERF 180

Query: 699 DETGKGKGIAGRKDLVDGSGYVTGY 773
           D +GKGKG AGR DLVD SGYV+GY
Sbjct: 181 DPSGKGKGKAGRVDLVDESGYVSGY 205


>AB017016-1|BAA36164.1|  219|Homo sapiens p25 alpha protein.
          Length = 219

 Score =  106 bits (255), Expect = 9e-23
 Identities = 61/145 (42%), Positives = 89/145 (61%), Gaps = 7/145 (4%)
 Frame = +3

Query: 360 GDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVK---LGIDDYQKFLD 530
           GD ++ G+ +      K  K  +VIDG+ +T TD  I F K+K      +  + +Q+ L+
Sbjct: 62  GDARATGREMHGKNWSKLCKDCQVIDGRNVTVTDVDIVFSKIKGKSCRTITFEQFQEALE 121

Query: 531 DLAKN--KKVELDEIKKKLTTC--GQPGITSHVTKSPAAAAAVDRLTDTSKYTGSHRQRF 698
           +LAK   K    +E  +++     G+  I S VTK+  ++  V RLTDT+K+TGSH++RF
Sbjct: 122 ELAKKRFKDKSSEEAVREVHRLIEGKAPIISGVTKA-ISSPTVSRLTDTTKFTGSHKERF 180

Query: 699 DETGKGKGIAGRKDLVDGSGYVTGY 773
           D +GKGKG AGR DLVD SGYV+GY
Sbjct: 181 DPSGKGKGKAGRVDLVDESGYVSGY 205


>BC038970-1|AAH38970.1|  170|Homo sapiens tubulin
           polymerization-promoting protein family member 2
           protein.
          Length = 170

 Score =  102 bits (244), Expect = 2e-21
 Identities = 57/145 (39%), Positives = 85/145 (58%), Gaps = 7/145 (4%)
 Frame = +3

Query: 360 GDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLD--- 530
           G+  S G  +      K  K   ++DGK +T+TD  I F K+K+       +Q+F +   
Sbjct: 16  GESSSSGTEMNNKNFSKLCKDCGIMDGKTVTSTDVDIVFSKVKAKNARTITFQQFKEAVK 75

Query: 531 DLAKN--KKVELDEIKKKLTTC--GQPGITSHVTKSPAAAAAVDRLTDTSKYTGSHRQRF 698
           +L +   K    DE+ + +     G+   T+  TK+     AVDRLTDTSKYTG+H++ F
Sbjct: 76  ELGQKRFKGKSPDEVLENIYGLMEGKDPATTGATKA-TTVGAVDRLTDTSKYTGTHKELF 134

Query: 699 DETGKGKGIAGRKDLVDGSGYVTGY 773
           DE+GKGKGIAGR+++ D +GYV+GY
Sbjct: 135 DESGKGKGIAGREEMTDNTGYVSGY 159


>AY173946-1|AAO49716.1|  170|Homo sapiens brain-specific protein
           p25-like protein protein.
          Length = 170

 Score =  102 bits (244), Expect = 2e-21
 Identities = 57/145 (39%), Positives = 85/145 (58%), Gaps = 7/145 (4%)
 Frame = +3

Query: 360 GDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLD--- 530
           G+  S G  +      K  K   ++DGK +T+TD  I F K+K+       +Q+F +   
Sbjct: 16  GESSSSGTEMNNKNFSKLCKDCGIMDGKTVTSTDVDIVFSKVKAKNARTITFQQFKEAVK 75

Query: 531 DLAKN--KKVELDEIKKKLTTC--GQPGITSHVTKSPAAAAAVDRLTDTSKYTGSHRQRF 698
           +L +   K    DE+ + +     G+   T+  TK+     AVDRLTDTSKYTG+H++ F
Sbjct: 76  ELGQKRFKGKSPDEVLENIYGLMEGKDPATTGATKA-TTVGAVDRLTDTSKYTGTHKELF 134

Query: 699 DETGKGKGIAGRKDLVDGSGYVTGY 773
           DE+GKGKGIAGR+++ D +GYV+GY
Sbjct: 135 DESGKGKGIAGREEMTDNTGYVSGY 159


>AY072034-1|AAL62338.1|  170|Homo sapiens p25 beta protein.
          Length = 170

 Score =  102 bits (244), Expect = 2e-21
 Identities = 57/145 (39%), Positives = 85/145 (58%), Gaps = 7/145 (4%)
 Frame = +3

Query: 360 GDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLD--- 530
           G+  S G  +      K  K   ++DGK +T+TD  I F K+K+       +Q+F +   
Sbjct: 16  GESSSSGTEMNNKNFSKLCKDCGIMDGKTVTSTDVDIVFSKVKAKNARTITFQQFKEAVK 75

Query: 531 DLAKN--KKVELDEIKKKLTTC--GQPGITSHVTKSPAAAAAVDRLTDTSKYTGSHRQRF 698
           +L +   K    DE+ + +     G+   T+  TK+     AVDRLTDTSKYTG+H++ F
Sbjct: 76  ELGQKRFKGKSPDEVLENIYGLMEGKDPATTGATKA-TTVGAVDRLTDTSKYTGTHKELF 134

Query: 699 DETGKGKGIAGRKDLVDGSGYVTGY 773
           DE+GKGKGIAGR+++ D +GYV+GY
Sbjct: 135 DESGKGKGIAGREEMTDNTGYVSGY 159


>D87440-1|BAA13382.2|  702|Homo sapiens KIAA0252 protein.
          Length = 702

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 33/141 (23%), Positives = 63/141 (44%)
 Frame = +3

Query: 192 STEAQNTDAAVEQVTQEVKDVKLENGNAPGASNGTSSKSEDXXXXXXXXXXXXXXXGDPK 371
           S+ + + D++ E    E  +V   + N+  +S+ + S SED               GD +
Sbjct: 127 SSGSSDKDSSAESSAPEEGEVSDSDSNSSSSSSDSDSSSEDEEFHDGYGEDLM---GDEE 183

Query: 372 SDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKK 551
              +   +++ ++  +    I+ +++      I  KKLK+ K      +K  +   K KK
Sbjct: 184 DRARLEQMTEKEREQELFNRIEKREVLKRRFEIK-KKLKTAK------KK--EKKEKKKK 234

Query: 552 VELDEIKKKLTTCGQPGITSH 614
            E ++ KKKLT   +  +TSH
Sbjct: 235 QEEEQEKKKLTQIQESQVTSH 255


>BC015052-1|AAH15052.1|  585|Homo sapiens Rtf1, Paf1/RNA polymerase
           II complex component, homolog (S. cerevisiae) protein.
          Length = 585

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 33/141 (23%), Positives = 63/141 (44%)
 Frame = +3

Query: 192 STEAQNTDAAVEQVTQEVKDVKLENGNAPGASNGTSSKSEDXXXXXXXXXXXXXXXGDPK 371
           S+ + + D++ E    E  +V   + N+  +S+ + S SED               GD +
Sbjct: 10  SSGSSDKDSSAESSAPEEGEVSDSDSNSSSSSSDSDSSSEDEEFHDGYGEDLM---GDEE 66

Query: 372 SDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKK 551
              +   +++ ++  +    I+ +++      I  KKLK+ K      +K  +   K KK
Sbjct: 67  DRARLEQMTEKEREQELFNRIEKREVLKRRFEIK-KKLKTAK------KK--EKKEKKKK 117

Query: 552 VELDEIKKKLTTCGQPGITSH 614
            E ++ KKKLT   +  +TSH
Sbjct: 118 QEEEQEKKKLTQIQESQVTSH 138


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,495,623
Number of Sequences: 237096
Number of extensions: 2402540
Number of successful extensions: 13576
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13565
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11039988564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -