Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_B23
         (878 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC028048-1|AAH28048.1|  800|Homo sapiens leukocyte receptor clus...    49   2e-05
AB067519-1|BAB67825.1|  795|Homo sapiens KIAA1932 protein protein.     49   2e-05

>BC028048-1|AAH28048.1|  800|Homo sapiens leukocyte receptor cluster
           (LRC) member 8 protein.
          Length = 800

 Score = 49.2 bits (112), Expect = 2e-05
 Identities = 17/58 (29%), Positives = 34/58 (58%)
 Frame = +3

Query: 201 WPESLERYIKKCYEKCKSKFDRDQVDICLKGRITAAANKDEIWTRNWDIEPIPSVHSE 374
           WP+ ++ Y+++C+  C+S+ D+D+ +  LK  + A       +T +W  EP+P +  E
Sbjct: 289 WPQDMKEYVERCFTACESEEDKDRTEKLLKEVLQARLQDGSAYTIDWSREPLPGLTRE 346


>AB067519-1|BAB67825.1|  795|Homo sapiens KIAA1932 protein protein.
          Length = 795

 Score = 49.2 bits (112), Expect = 2e-05
 Identities = 17/58 (29%), Positives = 34/58 (58%)
 Frame = +3

Query: 201 WPESLERYIKKCYEKCKSKFDRDQVDICLKGRITAAANKDEIWTRNWDIEPIPSVHSE 374
           WP+ ++ Y+++C+  C+S+ D+D+ +  LK  + A       +T +W  EP+P +  E
Sbjct: 268 WPQDMKEYVERCFTACESEEDKDRTEKLLKEVLQARLQDGSAYTIDWSREPLPGLTRE 325


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,604,313
Number of Sequences: 237096
Number of extensions: 1075591
Number of successful extensions: 2093
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2093
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)