Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_B13
(854 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 45 1e-05
SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomy... 42 1e-04
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 37 0.003
SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosa... 37 0.003
SPCC1235.13 |ght6|meu12|hexose transporter Ght6 |Schizosaccharom... 37 0.004
SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces ... 36 0.006
SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces ... 36 0.007
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 36 0.010
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 36 0.010
SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces ... 36 0.010
SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor Atf1|Sch... 27 2.6
SPAC637.13c |||cytoskeletal signaling protein|Schizosaccharomyce... 26 5.9
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 26 7.8
SPBC215.01 ||SPBC3B9.20|GTPase activating protein|Schizosaccharo... 26 7.8
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 45.2 bits (102), Expect = 1e-05
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = +3
Query: 585 LGRLLIGVNSGLNAGLVPLYLSEISPVSIRGSIGTVYQLVITVTIXXXXXXXXXXXXXTE 764
+GR +IG G+ + ++PLYLSEI+P IRG + +Y L+IT
Sbjct: 185 VGRFVIGWGVGIASLIIPLYLSEIAPSKIRGRLVIIYVLLITAG-QVIAYGIDTAFEHVH 243
Query: 765 DGWPW 779
+GW W
Sbjct: 244 NGWRW 248
>SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 557
Score = 41.5 bits (93), Expect = 1e-04
Identities = 15/42 (35%), Positives = 29/42 (69%)
Frame = +3
Query: 585 LGRLLIGVNSGLNAGLVPLYLSEISPVSIRGSIGTVYQLVIT 710
+GR ++G GL + +VP+Y++E++P +RG + +Y + IT
Sbjct: 178 VGRFIVGYGIGLTSLIVPMYITELAPARLRGRLVIIYVVFIT 219
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 37.1 bits (82), Expect = 0.003
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +3
Query: 585 LGRLLIGVNSGLNAGLVPLYLSEISPVSIRGSIGTVYQLVIT 710
+G++L GV G + L P Y SE++P IRG++ YQ+ T
Sbjct: 115 VGKILAGVGIGALSVLSPGYQSEVAPPQIRGAVVATYQIFST 156
>SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter
Ght7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 518
Score = 37.1 bits (82), Expect = 0.003
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = +3
Query: 585 LGRLLIGVNSGLNAGLVPLYLSEISPVSIRGSIGTVYQLVITVTI 719
+ ++ G++ G + + P Y SE++P +RG+I T YQL IT+ I
Sbjct: 83 VAKIWTGLSIGALSVITPGYQSEVAPAIMRGAIVTTYQLFITLGI 127
>SPCC1235.13 |ght6|meu12|hexose transporter Ght6
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 535
Score = 36.7 bits (81), Expect = 0.004
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +3
Query: 585 LGRLLIGVNSGLNAGLVPLYLSEISPVSIRGSIGTVYQLVITVTI 719
+ ++ G+ G + + P Y SE SP IRG+I T YQL IT+ I
Sbjct: 115 VAKIWTGLGIGALSVIAPGYQSESSPPHIRGAIVTTYQLFITLGI 159
>SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 546
Score = 36.3 bits (80), Expect = 0.006
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +3
Query: 585 LGRLLIGVNSGLNAGLVPLYLSEISPVSIRGSIGTVYQLVIT 710
+ ++ G++ G + L P + SE++P +RG+I T YQL +T
Sbjct: 115 VAKIWTGLSIGALSVLAPGFQSEVAPADLRGTIVTTYQLAVT 156
>SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 557
Score = 35.9 bits (79), Expect = 0.007
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +3
Query: 585 LGRLLIGVNSGLNAGLVPLYLSEISPVSIRGSIGTVYQLVIT 710
+G+L G+ G + L P Y SE++P IRG++ + YQL T
Sbjct: 115 VGKLFTGLTIGALSVLSPGYQSEVAPPQIRGAVVSTYQLFQT 156
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 35.5 bits (78), Expect = 0.010
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +3
Query: 585 LGRLLIGVNSGLNAGLVPLYLSEISPVSIRGSIGTVYQLVIT 710
+ ++ G+ G + L P Y SE +P SIRG++ YQL +T
Sbjct: 119 VAKIWTGIGIGALSVLAPGYQSETAPPSIRGTVVVTYQLFVT 160
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 35.5 bits (78), Expect = 0.010
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 585 LGRLLIGVNSGLNAGLVPLYLSEISPVSIRGSIGTVYQLVITVTI 719
+ ++ G+ G + L P Y SE++P IRG+I YQL +T I
Sbjct: 115 VAKIWTGLGIGALSVLAPGYQSEVAPPHIRGTIVVTYQLCVTAGI 159
>SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 547
Score = 35.5 bits (78), Expect = 0.010
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +3
Query: 585 LGRLLIGVNSGLNAGLVPLYLSEISPVSIRGSIGTVYQLVIT 710
+ ++ G+ G + L P + SE++P ++RG+I T YQL +T
Sbjct: 115 VAKIWTGLAIGALSVLAPGFQSEVAPATLRGTIVTTYQLAVT 156
>SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor
Atf1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 566
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = -3
Query: 405 TEVTFGSTMAETEVFVPPSASLWSHSLMTACGAFITPVLYPCWKA 271
+ + G A +PP +S+ S +++ +P+ YP W A
Sbjct: 117 SNIPSGVPPAFARTLLPPVSSIASPDILSGAPGIASPLGYPAWSA 161
>SPAC637.13c |||cytoskeletal signaling protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 498
Score = 26.2 bits (55), Expect = 5.9
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 211 SNGENEPAPRFRHYIVDLLVGLPAWIQYRRDKRSAGGHERMAPERGARRD 360
S+ +P P F YI D L+G P+ ++ K G + GAR D
Sbjct: 336 SDSLQDPEPEFALYIPDCLIGRPS---EKKPKFKITGKDATKKIFGARND 382
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 25.8 bits (54), Expect = 7.8
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 493 FSAVSVGNDSGDHTTNHAAGAVYGDSHRPDRSHLWIDHG 377
+S+ + SG +T +HA G S R S L ID G
Sbjct: 871 YSSSRQSSRSGSNTHSHAGPGFGGPSERKGISRLGIDRG 909
>SPBC215.01 ||SPBC3B9.20|GTPase activating
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 25.8 bits (54), Expect = 7.8
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 673 LIDTGDISDRYRGTKPAFRP 614
+IDT I +RG KPA RP
Sbjct: 757 VIDTNRIGKTFRGHKPASRP 776
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,272,370
Number of Sequences: 5004
Number of extensions: 66120
Number of successful extensions: 192
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 192
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 424464280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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