Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_B09
(888 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0824 - 32243495-32244319,32244449-32244859 51 1e-06
11_02_0012 - 7346282-7347136,7347234-7347593 48 1e-05
11_01_0767 + 6438648-6438809,6439146-6440000 48 1e-05
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 46 5e-05
11_02_0014 - 7352619-7352918,7353173-7353418 44 1e-04
11_02_0011 - 7337618-7338496,7338596-7338991 44 2e-04
11_01_0771 + 6453130-6454488 44 2e-04
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 44 2e-04
01_01_1152 + 9170628-9171899 42 7e-04
11_01_0750 - 6315126-6315896,6316371-6316784 38 0.008
05_06_0044 - 25150322-25151260 31 1.6
08_01_0906 + 8933230-8933797,8933894-8934543,8937956-8938615,893... 29 4.9
05_05_0373 - 24478361-24479383 29 4.9
12_01_0053 - 438527-438670,439038-439247,439401-439530,439672-43... 29 6.5
03_05_0725 + 27155736-27155746,27155798-27155949,27156108-271580... 29 6.5
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 51.2 bits (117), Expect = 1e-06
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +1
Query: 487 FNSDVQNIDF-SKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGSM 663
+ ++ + + F K A + IN+W E T RIKD + D++ AT AVL NA+YFKG
Sbjct: 125 YRAEARPVSFRDKLEEARREINEWFESATAGRIKDFLPKDAVDRATPAVLGNALYFKGDW 184
Query: 664 E 666
E
Sbjct: 185 E 185
Score = 34.3 bits (75), Expect = 0.13
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +2
Query: 653 RGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKY 769
+G W SKFD R TSD FY+ + P M G ++Y
Sbjct: 181 KGDWESKFDARSTSDDVFYLPDGGHVSAPFM-SSGKWQY 218
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +1
Query: 511 DFSKNTVAA-KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKG 657
DF + ++ K IN WV + TN I++++ S+ TA VLVNAIYFKG
Sbjct: 116 DFQRQPKSSRKKINKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFKG 165
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +1
Query: 487 FNSDVQNIDFSKNTVAA-KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKG 657
+ +DF + V A K IN WV T N I +++ P+S S T V+ NAIYFKG
Sbjct: 42 YKGAASTVDFKNHPVEARKEINAWVARATKNLITEVIKPESQSVDTRHVVGNAIYFKG 99
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 653 RGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYK-RGDYKY 769
+G W + FD+ T++R+F +++VP M + G Y +
Sbjct: 98 KGEWLAPFDKSDTAEREFRRLDGSSVEVPFMQRPSGSYHH 137
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 45.6 bits (103), Expect = 5e-05
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +1
Query: 520 KNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGS 660
K A +N WVE+ T+ IK+++ P S+ T VL NA+YFKG+
Sbjct: 209 KAAEVASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGA 255
Score = 42.7 bits (96), Expect = 4e-04
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +1
Query: 544 INDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGS 660
+N WV+ T+ IK++ P S++ T VL NA+YFKG+
Sbjct: 469 VNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGA 507
Score = 34.3 bits (75), Expect = 0.13
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 653 RGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 745
+GAW+ KFD T D +F++ K+++ P M
Sbjct: 253 KGAWTEKFDASKTKDGEFHLLDGKSVQAPFM 283
Score = 33.1 bits (72), Expect = 0.30
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 653 RGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKR 754
+GAW+ KFD T D +F++ ++++ P M R
Sbjct: 505 KGAWAEKFDVSKTEDGEFHLLDGESVQAPFMSTR 538
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = +1
Query: 538 KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKG 657
K IN+WV + TN I +++ S+ T VLVNAIYFKG
Sbjct: 88 KKINEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKG 127
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 44.0 bits (99), Expect = 2e-04
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +1
Query: 538 KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKG 657
K IN WV + TN I +++ S+ TA VLVNAIYFKG
Sbjct: 138 KKINKWVSKATNKLIPEILPDGSVHVDTALVLVNAIYFKG 177
>11_01_0771 + 6453130-6454488
Length = 452
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = +1
Query: 532 AAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGSME 666
A K IN W T I D++ P S+ TA VL NAIYFKG +
Sbjct: 173 ARKQINAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKWD 217
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +1
Query: 535 AKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGS 660
A +N WV+ T+ IK+++ P S+ T VL NA+YFKG+
Sbjct: 6 ASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGA 47
Score = 31.5 bits (68), Expect = 0.93
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 653 RGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 745
+GAW+ KFD T D +F + K++ P M
Sbjct: 45 KGAWTEKFDASKTKDGEFRLLDGKSVLAPFM 75
>01_01_1152 + 9170628-9171899
Length = 423
Score = 41.9 bits (94), Expect = 7e-04
Identities = 17/43 (39%), Positives = 30/43 (69%)
Frame = +1
Query: 532 AAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGS 660
A + +N +V + T I+D++ P+S+ S+T VL NA++FKG+
Sbjct: 159 ARERVNAFVSDATEGLIRDVLPPNSVDSSTVVVLANAVHFKGT 201
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 38.3 bits (85), Expect = 0.008
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 484 VFNSDVQNIDF-SKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKG 657
V+ S + DF +K A IN WV+++T + L+ ++ T VL +A+YF+G
Sbjct: 125 VYGSAAKKADFKNKPEDAPDQINSWVKDSTKGTVTTLLPAGTIDQNTGLVLGSALYFRG 183
>05_06_0044 - 25150322-25151260
Length = 312
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 662 WSSKFDERLTSDRDFYVSKDKTIKVPMM 745
W F LT + DF+VS D ++VP M
Sbjct: 90 WDHPFFPHLTEEGDFHVSPDHDVRVPFM 117
>08_01_0906 +
8933230-8933797,8933894-8934543,8937956-8938615,
8939751-8939817,8940421-8940724,8942993-8942996,
8944539-8946449
Length = 1387
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/41 (29%), Positives = 27/41 (65%)
Frame = +3
Query: 342 DDAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGKLDENF 464
++++ A+K+ ++ ++KG+E+ A K++ G LDE+F
Sbjct: 595 EESVANYCATKNNNVWNVKGLEVTGAIKLFDQRWGNLDEDF 635
>05_05_0373 - 24478361-24479383
Length = 340
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 529 VAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLV 636
VA + +DW E + ++ D V PD+LSS AAV +
Sbjct: 153 VALREPHDWGESTAHAQL-DAVAPDALSSCDAAVFL 187
>12_01_0053 -
438527-438670,439038-439247,439401-439530,439672-439842,
440233-440355,440439-440543,440656-441332,441498-441604,
441970-442177,442178-442245,444209-444411,444580-444663,
444780-445109,445238-445438,445667-445744,446236-446306
Length = 969
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 357 TEFASKSRDLRSIKGVELKMANKVYVHDG 443
T+ S S+D++ ++ VE + N VHDG
Sbjct: 520 TQIPSASKDIKEVRAVEEFLPNDFVVHDG 548
>03_05_0725 +
27155736-27155746,27155798-27155949,27156108-27158068,
27159169-27159397,27159506-27159634,27159725-27159838,
27160059-27160258,27160301-27160599,27160713-27160923,
27161017-27161172,27161290-27161447,27161532-27161724,
27162015-27162406,27162537-27162717,27162802-27163031,
27163108-27163753,27163833-27163902,27163994-27164244
Length = 1860
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -1
Query: 552 IVNRLSCDCILREINILDVRIEDVXWKRLQNSRLVFH 442
+V L+ D ILREIN+ V++E + W +N + H
Sbjct: 546 LVKLLTADRILREINL--VKLESLLWHNDENINKITH 580
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,980,163
Number of Sequences: 37544
Number of extensions: 366700
Number of successful extensions: 979
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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