Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_B09
         (888 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              25   0.70 
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   2.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   2.8  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    23   2.8  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    23   2.8  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    23   2.8  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    23   2.8  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    22   6.5  

>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 25.4 bits (53), Expect = 0.70
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -1

Query: 543 RLSCDCILREINILD 499
           +L C+CIL+  NILD
Sbjct: 60  QLYCECILKNFNILD 74


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -2

Query: 251 MPRGQCFSLDYFSLLR 204
           +PRG+ FSL Y  LLR
Sbjct: 91  LPRGELFSLYYPQLLR 106


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -2

Query: 251 MPRGQCFSLDYFSLLR 204
           +PRG+ FSL Y  LLR
Sbjct: 91  LPRGELFSLYYPQLLR 106


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 9/44 (20%), Positives = 25/44 (56%)
 Frame = +2

Query: 53  LLSLDIRETQATNMKTIICLFTIAIAAMAAVTNLSNVLKNGNDN 184
           +LSL +    ++ + TI+C+ T+A+  +  +    ++ ++G  +
Sbjct: 19  VLSLSLTSLASSLIFTILCILTLAL-TLVTLVRAEDIFEDGKSD 61


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 9/44 (20%), Positives = 25/44 (56%)
 Frame = +2

Query: 53  LLSLDIRETQATNMKTIICLFTIAIAAMAAVTNLSNVLKNGNDN 184
           +LSL +    ++ + TI+C+ T+A+  +  +    ++ ++G  +
Sbjct: 19  VLSLSLTSLASSLIFTILCILTLAL-TLVTLVRAEDIFEDGKSD 61


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 9/44 (20%), Positives = 25/44 (56%)
 Frame = +2

Query: 53  LLSLDIRETQATNMKTIICLFTIAIAAMAAVTNLSNVLKNGNDN 184
           +LSL +    ++ + TI+C+ T+A+  +  +    ++ ++G  +
Sbjct: 19  VLSLSLTSLASSLIFTILCILTLAL-TLVTLVRAEDIFEDGKSD 61


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 9/44 (20%), Positives = 25/44 (56%)
 Frame = +2

Query: 53  LLSLDIRETQATNMKTIICLFTIAIAAMAAVTNLSNVLKNGNDN 184
           +LSL +    ++ + TI+C+ T+A+  +  +    ++ ++G  +
Sbjct: 19  VLSLSLTSLASSLIFTILCILTLAL-TLVTLVRAEDIFEDGKSD 61


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +2

Query: 224 PGKSIVLSAFSVLPPLAQLALASDGET-HEELLKAIGF 334
           P K +   AF   PPL + A+    +T    ++KA+ F
Sbjct: 406 PSKPMCAEAFQEFPPLGRFAVRDMRQTVAVGVIKAVTF 443


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,358
Number of Sequences: 438
Number of extensions: 4019
Number of successful extensions: 23
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)