Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_B06
         (898 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_03_0221 - 16554910-16555560                                         29   3.8  
06_01_0966 - 7439901-7440034,7440529-7440610,7440634-7440927,744...    29   5.0  
06_03_0436 + 20755816-20756025,20756124-20756240,20756942-207571...    29   6.6  
11_06_0184 - 21006659-21009823                                         28   8.8  
06_02_0066 - 11081446-11081544,11081639-11081846,11083122-110832...    28   8.8  

>02_03_0221 - 16554910-16555560
          Length = 216

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = +1

Query: 421 ALLLCLIGCCPCACIPYC-TDSCKDA 495
           AL  CL+G C   C   C TDS +DA
Sbjct: 78  ALTACLVGACALCCFLLCFTDSYRDA 103


>06_01_0966 -
           7439901-7440034,7440529-7440610,7440634-7440927,
           7441081-7441308,7442803-7442963,7444518-7444608
          Length = 329

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -2

Query: 771 LQPTLRQLMTEFIHYTVNKTLFLYVSSNTFRPIC 670
           L+P LR+L T +   +V   LFL ++SN  +  C
Sbjct: 231 LRPVLRRLFTTYFGESVQDVLFLRIASNEGKAQC 264


>06_03_0436 +
           20755816-20756025,20756124-20756240,20756942-20757137,
           20757393-20757544,20757653-20757736,20757848-20757925,
           20757958-20758116,20758219-20758251,20759119-20759826,
           20759917-20759998,20760093-20760449,20760586-20760692,
           20760796-20761001,20761480-20761623,20761715-20761800,
           20762120-20762283,20762559-20763119
          Length = 1147

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +1

Query: 538 NR*IFQLVQLIINCKNNILVLLFNSILSYELSI 636
           NR +F  VQ +  CK N +  L+  IL+Y+L I
Sbjct: 627 NRKLFNEVQELKGCKANSIAHLYADILNYQLLI 659


>11_06_0184 - 21006659-21009823
          Length = 1054

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +1

Query: 427 LLCLIGCCPCACIPYCTDSCKDANHYCPNCNAYIGSYNR*IFQLVQLIIN 576
           LL  + C  CA +  CT+  K A + C N +A  G   + I+ LV + +N
Sbjct: 443 LLTSMSCSDCAVV-LCTNDSKMAKYCCSNDSANDGP--QIIYSLVDIYLN 489


>06_02_0066 -
           11081446-11081544,11081639-11081846,11083122-11083257,
           11083339-11083541,11083616-11083765,11083848-11083964,
           11084623-11085119
          Length = 469

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = +3

Query: 243 TARSIPGRSFRRPRAPPAVRYSCP--GTTNGP 332
           +A S+ GRSF  P A    RYS P   T+NGP
Sbjct: 349 SAASLYGRSFAYPPANNLNRYSTPPQSTSNGP 380


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,982,857
Number of Sequences: 37544
Number of extensions: 410048
Number of successful extensions: 1017
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1017
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)