Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_B04
(891 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0079 - 20732041-20732097,20732219-20732301,20732661-207328... 131 8e-31
01_01_0322 - 2589074-2589121,2589214-2589296,2589414-2589492,258... 122 3e-28
01_06_1301 + 36122797-36122838,36122958-36123033,36123145-361232... 120 2e-27
03_05_1169 + 30892888-30892916,30894786-30894822,30895091-308951... 36 0.033
09_01_0088 + 1268120-1268139,1268288-1268361,1268500-1268750,126... 33 0.40
01_04_0083 - 15838922-15839065,15839153-15839443,15839555-158396... 31 1.6
01_04_0054 - 15456668-15459691 30 2.1
04_04_0148 - 23114000-23114113,23114215-23114350,23114813-231149... 29 6.6
01_06_0627 - 30705604-30706977 29 6.6
03_05_0712 - 27057858-27057941,27058093-27058182,27058268-270583... 28 8.7
02_04_0056 + 19313422-19313967,19314035-19314168,19314263-193143... 28 8.7
01_06_0192 + 27347369-27348826,27349124-27349264,27349350-273510... 28 8.7
>09_06_0079 -
20732041-20732097,20732219-20732301,20732661-20732834,
20732927-20733059,20733226-20733310,20733527-20733650,
20733835-20733904,20734643-20734669,20734788-20734949
Length = 304
Score = 131 bits (316), Expect = 8e-31
Identities = 56/113 (49%), Positives = 77/113 (68%)
Frame = +2
Query: 125 KFVVGGNWKMNGDKNQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIPDNVEVAAQ 304
KF VGGNWK NG K+ ++++V L L+P+V+V+V P IY+ VK + D +EV+AQ
Sbjct: 54 KFFVGGNWKCNGTKDSVSKLVTELNAATLEPDVDVVVAPPFIYIDQVKNSLTDRIEVSAQ 113
Query: 305 NCWKSPKGAFTGEISPAMIKDVGVNWVILGHSERRTIFGEKDELVAEKVAHAL 463
N W GA+TGEIS + D+G WVILGHSERR + GE D+ + +K A+AL
Sbjct: 114 NVWIGKGGAYTGEISAEQLVDIGCQWVILGHSERRHVIGEDDQFIGKKAAYAL 166
Score = 119 bits (287), Expect = 3e-27
Identities = 54/80 (67%), Positives = 64/80 (80%)
Frame = +1
Query: 586 WENIVLAYEPVWAIGTGKTATPQQAQDVHHALRNWLSANVSGSVSDAVRIQYGGSVXAAN 765
W ++V+AYEPVWAIGTGK ATP+QAQ+VH A+R+WL NVS V+ +RI YGGSV AAN
Sbjct: 206 WADVVIAYEPVWAIGTGKVATPEQAQEVHAAVRDWLKTNVSPEVASGIRIIYGGSVNAAN 265
Query: 766 AKELASCKDIDGXLVGGASL 825
ELA +DIDG LVGGASL
Sbjct: 266 CAELAKKEDIDGFLVGGASL 285
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/36 (63%), Positives = 28/36 (77%), Gaps = 2/36 (5%)
Frame = +3
Query: 477 KVIACIGETLEERESGKTEEVVFRQLKALV--IGHW 578
KVIACIGE LEERE+GKT +V F+Q+KA I +W
Sbjct: 171 KVIACIGELLEEREAGKTFDVCFKQMKAFADSITNW 206
>01_01_0322 -
2589074-2589121,2589214-2589296,2589414-2589492,
2589622-2589716,2590198-2590330,2590601-2590685,
2591040-2591163,2591297-2591372,2594305-2594319
Length = 245
Score = 122 bits (295), Expect = 3e-28
Identities = 55/80 (68%), Positives = 64/80 (80%)
Frame = +1
Query: 586 WENIVLAYEPVWAIGTGKTATPQQAQDVHHALRNWLSANVSGSVSDAVRIQYGGSVXAAN 765
W N+V+AYEPVWAIGTGK ATP QAQ+VH LR WL+ANVS V+++ RI YGGSV AN
Sbjct: 150 WTNVVVAYEPVWAIGTGKVATPDQAQEVHDGLRKWLAANVSAEVAESTRIIYGGSVTGAN 209
Query: 766 AKELASCKDIDGXLVGGASL 825
KELA+ D+DG LVGGASL
Sbjct: 210 CKELAAKPDVDGFLVGGASL 229
Score = 106 bits (255), Expect = 2e-23
Identities = 49/107 (45%), Positives = 74/107 (69%), Gaps = 2/107 (1%)
Frame = +2
Query: 149 KMNGDKNQINEIVNNLKKGPLDPN--VEVIVGVPAIYLSYVKTIIPDNVEVAAQNCWKSP 322
++NG +Q+++IV L +G + VEV+V P ++L VK+ + ++VAAQNCW
Sbjct: 4 ELNGTTDQVDKIVKILNEGQIASTDVVEVVVSPPYVFLPVVKSQLRPEIQVAAQNCWVKK 63
Query: 323 KGAFTGEISPAMIKDVGVNWVILGHSERRTIFGEKDELVAEKVAHAL 463
GAFTGE+S M+ ++ + WVILGHSERR++ GE +E V +KVA+AL
Sbjct: 64 GGAFTGEVSAEMLVNLSIPWVILGHSERRSLLGESNEFVGDKVAYAL 110
Score = 44.8 bits (101), Expect = 9e-05
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = +3
Query: 477 KVIACIGETLEERESGKTEEVVFRQLKAL 563
KVIAC+GETLE+RESG T +VV Q KA+
Sbjct: 115 KVIACVGETLEQRESGSTMDVVAAQTKAI 143
>01_06_1301 +
36122797-36122838,36122958-36123033,36123145-36123268,
36123675-36123759,36124076-36124208,36124712-36124806,
36124982-36125060,36125205-36125287,36125505-36125555
Length = 255
Score = 120 bits (289), Expect = 2e-27
Identities = 58/116 (50%), Positives = 76/116 (65%), Gaps = 2/116 (1%)
Frame = +2
Query: 122 RKFVVGGNWKMNGDKNQINEIVNNLKKG--PLDPNVEVIVGVPAIYLSYVKTIIPDNVEV 295
RKF VGGNWK NG + +IV L + P + VEV+V P ++L VK ++ + V
Sbjct: 4 RKFFVGGNWKCNGTGEDVKKIVTVLNEAEVPSEDVVEVVVSPPFVFLPQVKGLLRPDFSV 63
Query: 296 AAQNCWKSPKGAFTGEISPAMIKDVGVNWVILGHSERRTIFGEKDELVAEKVAHAL 463
AAQNCW GAFTGEIS M+ ++ V WVILGHSERR + GE + VA+K+A+AL
Sbjct: 64 AAQNCWVRKGGAFTGEISAEMLVNLQVPWVILGHSERRALMGESSDFVADKIAYAL 119
Score = 117 bits (281), Expect = 1e-26
Identities = 54/80 (67%), Positives = 62/80 (77%)
Frame = +1
Query: 586 WENIVLAYEPVWAIGTGKTATPQQAQDVHHALRNWLSANVSGSVSDAVRIQYGGSVXAAN 765
W N+VLAYEPVWAIGTGK ATP QAQ+VH LR WL NVS +V+++ RI Y GSV AN
Sbjct: 159 WTNVVLAYEPVWAIGTGKVATPAQAQEVHDGLRKWLVTNVSPAVAESTRIIYRGSVNGAN 218
Query: 766 AKELASCKDIDGXLVGGASL 825
KELA+ D+DG LVGGASL
Sbjct: 219 CKELAAKPDVDGFLVGGASL 238
Score = 45.2 bits (102), Expect = 7e-05
Identities = 23/36 (63%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
Frame = +3
Query: 477 KVIACIGETLEERESGKTEEVVFRQLKALV--IGHW 578
KVIACIGETLE+RE+G T EVV Q KA+ I W
Sbjct: 124 KVIACIGETLEQREAGTTMEVVAAQTKAIAEKISDW 159
>03_05_1169 +
30892888-30892916,30894786-30894822,30895091-30895146,
30895192-30895306,30896063-30896127,30896218-30896299,
30896420-30896479
Length = 147
Score = 36.3 bits (80), Expect = 0.033
Identities = 24/55 (43%), Positives = 30/55 (54%)
Frame = +1
Query: 661 QDVHHALRNWLSANVSGSVSDAVRIQYGGSVXAANAKELASCKDIDGXLVGGASL 825
Q VH LR L+ NV ++ R S A+N KELA D++G LV GASL
Sbjct: 78 QTVHGGLRKLLTTNVRIHMNHLCR-----SCTASNCKELAVQPDLNGFLVSGASL 127
>09_01_0088 +
1268120-1268139,1268288-1268361,1268500-1268750,
1268845-1269048,1269488-1269805,1269893-1269910
Length = 294
Score = 32.7 bits (71), Expect = 0.40
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +2
Query: 59 LQLIHDIC*KVGSSNKITEMGRKFVVGG---NWKMNGDKNQINEIVNNLKKGPLDPNV 223
LQ H + +V S I+E+ RKF + G NW ++ ++ + + LKKG PN+
Sbjct: 95 LQWNHKLYKRVYYSKMISEVERKFAIDGRANNWILHQLDGKLRQYKSKLKKGYYKPNL 152
>01_04_0083 -
15838922-15839065,15839153-15839443,15839555-15839653,
15839733-15839825,15839913-15840116,15840209-15840459,
15841045-15841096,15841527-15841625,15842222-15842299
Length = 436
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +2
Query: 59 LQLIHDIC*KVGSSNKITEMGRKFVVGG---NWKMNGDKNQINEIVNNLKKGPLDPNVEV 229
LQ H + +V I+E+ RKF + G NW ++ + + + LKKG PN+ +
Sbjct: 140 LQWNHKLYKRVYHPKMISEVERKFAIDGRANNWNLHQLDGKWRQYKSKLKKGYYKPNLSM 199
>01_04_0054 - 15456668-15459691
Length = 1007
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = -3
Query: 577 QWPITKAFNCLKTTSSVLPDSLSSRVSPIQAMTFKPDX-KGMSNLFSNKFIFFTKNCSSF 401
++ I + +C + ++ VL L +RV +A+ FKPD +G + +N+ I F+ SF
Sbjct: 921 EYTIGEITDCTEASTKVL---LLTRVDGYRAV-FKPDSVRGTLEIPTNENIRFSHLIPSF 976
Query: 400 RMTKYN 383
R+TK N
Sbjct: 977 RLTKEN 982
>04_04_0148 -
23114000-23114113,23114215-23114350,23114813-23114912,
23115003-23115113,23115197-23115234,23115359-23115429,
23116998-23117176,23117272-23117389
Length = 288
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 304 LGCNFDIIRNDSLHIRQVNSRNTNNYL 224
LG NF++ RND L I V +N L
Sbjct: 104 LGLNFEVYRNDELTIEDVKRKNPRGIL 130
>01_06_0627 - 30705604-30706977
Length = 457
Score = 28.7 bits (61), Expect = 6.6
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 613 PVWAIGTGKTATPQQAQDVHHALRNWLSANVSGSVSDAVRIQYG--GSVXAANAKELA 780
PV+ +G + ++ V HA WL A + SV V + +G GS AA KE+A
Sbjct: 223 PVYCVGPLVASGEEEGGGVRHACLAWLDAQPARSV---VFLCFGSMGSFSAAQLKEIA 277
>03_05_0712 -
27057858-27057941,27058093-27058182,27058268-27058384,
27059759-27059866,27060314-27060406,27060499-27060669,
27061505-27061757,27061860-27062138,27062939-27063273,
27063364-27064332,27064711-27065182,27065243-27065291,
27066564-27066804,27067606-27067695,27068172-27068294,
27068365-27068418
Length = 1175
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/72 (19%), Positives = 34/72 (47%)
Frame = -3
Query: 616 QVHRQAQYFPICHQWPITKAFNCLKTTSSVLPDSLSSRVSPIQAMTFKPDXKGMSNLFSN 437
+VHR ++ + H W + + ++ ++ S L + + ++ K + +S++
Sbjct: 75 EVHRVIRHVAVVHMWRVWRRYSVIRIVSEQLHEEWEALINQPDINLTK---QWISSMMLR 131
Query: 436 KFIFFTKNCSSF 401
F+FF SS+
Sbjct: 132 PFLFFVTQPSSW 143
>02_04_0056 +
19313422-19313967,19314035-19314168,19314263-19314398,
19314870-19314923,19314995-19315135,19315220-19315546,
19315647-19315916,19316080-19316226,19316890-19317045,
19317223-19317290,19318210-19318309,19318696-19318985,
19319074-19319274,19319840-19319902,19320263-19320356,
19320964-19321035,19321979-19322077,19322254-19322376
Length = 1006
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 5/38 (13%)
Frame = +2
Query: 107 ITEMGRKFVVGGNWKMNGDKN-----QINEIVNNLKKG 205
+ ++ ++F+ GGN +NGD + I E+V L+KG
Sbjct: 709 LNKLAKRFLHGGNGAVNGDSSLPSRAYIEEVVQELQKG 746
>01_06_0192 + 27347369-27348826,27349124-27349264,27349350-27351081,
27353739-27354606,27354784-27355957
Length = 1790
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = -1
Query: 798 INVFAGCKLLSISSXDRATVLNTYSVRYTPTHIGRQPVTKSMVDILSLLG 649
+ FA K + SS ++ V +T+ Y P+ I ++ + K + ILS G
Sbjct: 963 LKAFASIKQVIFSSMEKNNVPHTFWSSYLPSLIQQKGIAKRIASILSGYG 1012
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,498,739
Number of Sequences: 37544
Number of extensions: 479222
Number of successful extensions: 1081
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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