Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_B04
(891 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23081-1|AAA79846.1| 247|Caenorhabditis elegans triosephosphate... 153 2e-37
AL023828-10|CAA19447.1| 247|Caenorhabditis elegans Hypothetical... 153 2e-37
U61944-2|AAL56621.1| 705|Caenorhabditis elegans Dynamin related... 32 0.63
U61944-1|AAL56622.1| 712|Caenorhabditis elegans Dynamin related... 32 0.63
AF166274-1|AAD49861.1| 705|Caenorhabditis elegans dynamin-relat... 32 0.63
Z46242-3|CAA86338.2| 680|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z46242-2|CAA86335.2| 683|Caenorhabditis elegans Hypothetical pr... 30 1.9
AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical ... 30 2.6
U58760-4|AAK31462.2| 678|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF077540-8|AAC26310.2| 683|Caenorhabditis elegans Btb and math ... 29 4.5
U13645-6|AAV34802.1| 457|Caenorhabditis elegans Hypothetical pr... 29 5.9
U13645-5|AAM15541.1| 425|Caenorhabditis elegans Hypothetical pr... 29 5.9
U13645-4|AAA20986.2| 529|Caenorhabditis elegans Hypothetical pr... 29 5.9
>U23081-1|AAA79846.1| 247|Caenorhabditis elegans triosephosphate
isomerase protein.
Length = 247
Score = 153 bits (370), Expect = 2e-37
Identities = 72/116 (62%), Positives = 86/116 (74%)
Frame = +2
Query: 116 MGRKFVVGGNWKMNGDKNQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIPDNVEV 295
M RKF VGGNWKMNGD ++ IV L + +V+V+V PA YL+Y K+ + V V
Sbjct: 1 MTRKFFVGGNWKMNGDYASVDGIVTFLNASADNSSVDVVVAPPAPYLAYAKSKLKAGVLV 60
Query: 296 AAQNCWKSPKGAFTGEISPAMIKDVGVNWVILGHSERRTIFGEKDELVAEKVAHAL 463
AAQNC+K PKGAFTGEISPAMIKD+G+ WVILGHSERR +FGE D L+AEK HAL
Sbjct: 61 AAQNCYKVPKGAFTGEISPAMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHAL 116
Score = 111 bits (266), Expect = 9e-25
Identities = 57/90 (63%), Positives = 67/90 (74%), Gaps = 3/90 (3%)
Frame = +1
Query: 565 LSAIGDK---WENIVLAYEPVWAIGTGKTATPQQAQDVHHALRNWLSANVSGSVSDAVRI 735
L AI DK WENIV+AYEPVWAIGTGKTA+ +QAQ+VH +R +L VS +V+DA RI
Sbjct: 146 LQAIVDKGVSWENIVIAYEPVWAIGTGKTASGEQAQEVHEWIRAFLKEKVSPAVADATRI 205
Query: 736 QYGGSVXAANAKELASCKDIDGXLVGGASL 825
YGGSV A NA ++ DIDG LVGGASL
Sbjct: 206 IYGGSVTADNAADVGKKPDIDGFLVGGASL 235
Score = 45.6 bits (103), Expect = 5e-05
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = +3
Query: 477 KVIACIGETLEERESGKTEEVVFRQLKALV 566
KV+ CIGE LEERE+G T++V FRQL+A+V
Sbjct: 121 KVVFCIGEKLEEREAGHTKDVNFRQLQAIV 150
>AL023828-10|CAA19447.1| 247|Caenorhabditis elegans Hypothetical
protein Y17G7B.7 protein.
Length = 247
Score = 153 bits (370), Expect = 2e-37
Identities = 72/116 (62%), Positives = 86/116 (74%)
Frame = +2
Query: 116 MGRKFVVGGNWKMNGDKNQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIPDNVEV 295
M RKF VGGNWKMNGD ++ IV L + +V+V+V PA YL+Y K+ + V V
Sbjct: 1 MTRKFFVGGNWKMNGDYASVDGIVTFLNASADNSSVDVVVAPPAPYLAYAKSKLKAGVLV 60
Query: 296 AAQNCWKSPKGAFTGEISPAMIKDVGVNWVILGHSERRTIFGEKDELVAEKVAHAL 463
AAQNC+K PKGAFTGEISPAMIKD+G+ WVILGHSERR +FGE D L+AEK HAL
Sbjct: 61 AAQNCYKVPKGAFTGEISPAMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHAL 116
Score = 113 bits (272), Expect = 2e-25
Identities = 59/90 (65%), Positives = 67/90 (74%), Gaps = 3/90 (3%)
Frame = +1
Query: 565 LSAIGDK---WENIVLAYEPVWAIGTGKTATPQQAQDVHHALRNWLSANVSGSVSDAVRI 735
L AI DK WENIV+AYEPVWAIGTGKTA+ +QAQ+VH +R +L VS +V+DA RI
Sbjct: 146 LQAIVDKGVSWENIVIAYEPVWAIGTGKTASGEQAQEVHEWIRAFLKEKVSPAVADATRI 205
Query: 736 QYGGSVXAANAKELASCKDIDGXLVGGASL 825
YGGSV A NA EL DIDG LVGGASL
Sbjct: 206 IYGGSVTADNAAELGKKPDIDGFLVGGASL 235
Score = 45.6 bits (103), Expect = 5e-05
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = +3
Query: 477 KVIACIGETLEERESGKTEEVVFRQLKALV 566
KV+ CIGE LEERE+G T++V FRQL+A+V
Sbjct: 121 KVVFCIGEKLEEREAGHTKDVNFRQLQAIV 150
>U61944-2|AAL56621.1| 705|Caenorhabditis elegans Dynamin related
protein protein1, isoform a protein.
Length = 705
Score = 31.9 bits (69), Expect = 0.63
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +2
Query: 167 NQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIPDNVE 292
++INE+V+ + K L P E++ + AI L+Y+ T P+ E
Sbjct: 464 DKINEVVSGVLKERLKPTNELVENLVAIELAYINTKHPEFTE 505
>U61944-1|AAL56622.1| 712|Caenorhabditis elegans Dynamin related
protein protein1, isoform b protein.
Length = 712
Score = 31.9 bits (69), Expect = 0.63
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +2
Query: 167 NQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIPDNVE 292
++INE+V+ + K L P E++ + AI L+Y+ T P+ E
Sbjct: 464 DKINEVVSGVLKERLKPTNELVENLVAIELAYINTKHPEFTE 505
>AF166274-1|AAD49861.1| 705|Caenorhabditis elegans dynamin-related
protein protein.
Length = 705
Score = 31.9 bits (69), Expect = 0.63
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +2
Query: 167 NQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIPDNVE 292
++INE+V+ + K L P E++ + AI L+Y+ T P+ E
Sbjct: 464 DKINEVVSGVLKERLKPTNELVENLVAIELAYINTKHPEFTE 505
>Z46242-3|CAA86338.2| 680|Caenorhabditis elegans Hypothetical
protein F35G12.4b protein.
Length = 680
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = +1
Query: 589 ENIVLAYEPVWAIGTGKTATPQQAQDVHHALRNWLSANVSGSVSD--AVRIQYGGSVXAA 762
EN Y P W + K+ Q D AL +WLS+ +G + ++ YGG + +
Sbjct: 440 ENSRQVYIPSWFVVDSKSGMLQITLDELDALSSWLSSKDAGFDDNDRETKLNYGGMMLRS 499
Query: 763 NAKELASCK 789
+ CK
Sbjct: 500 LFERWPPCK 508
>Z46242-2|CAA86335.2| 683|Caenorhabditis elegans Hypothetical
protein F35G12.4a protein.
Length = 683
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = +1
Query: 589 ENIVLAYEPVWAIGTGKTATPQQAQDVHHALRNWLSANVSGSVSD--AVRIQYGGSVXAA 762
EN Y P W + K+ Q D AL +WLS+ +G + ++ YGG + +
Sbjct: 440 ENSRQVYIPSWFVVDSKSGMLQITLDELDALSSWLSSKDAGFDDNDRETKLNYGGMMLRS 499
Query: 763 NAKELASCK 789
+ CK
Sbjct: 500 LFERWPPCK 508
>AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical
protein R10F2.1 protein.
Length = 2779
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +1
Query: 616 VWAIGTGKTATPQQAQDVHHALRNWLSANVSGSVSDAVRIQYGGS 750
V+++ TG+ T AQ HH + ++++VS S SDA+R+ G S
Sbjct: 2612 VYSVKTGEIRTLSDAQHHHHHPTHSMTSSVSTS-SDALRMVRGSS 2655
>U58760-4|AAK31462.2| 678|Caenorhabditis elegans Hypothetical
protein C27A2.4 protein.
Length = 678
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 391 KYNPIYSNVFDHSG*NFTSKSSFWRLPTVLGC 296
K N ++S + +H+G + +FWR+P L C
Sbjct: 171 KVNSLFSKLSEHTG-EVINADNFWRIPDTLRC 201
>AF077540-8|AAC26310.2| 683|Caenorhabditis elegans Btb and math
domain containingprotein 47 protein.
Length = 683
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 158 GDKNQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIP 280
GD N I+++++ +EV+ G PAI+ + V+ I+P
Sbjct: 47 GDSNYQEHIISDVEPQDFQKFLEVVHGEPAIFEATVQKILP 87
>U13645-6|AAV34802.1| 457|Caenorhabditis elegans Hypothetical
protein C05D10.1c protein.
Length = 457
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -1
Query: 738 LNTYSVRYTPTHIGRQPVTKSMVDILSLLGSSSLACTNSP 619
+++ +V TPT G T+SMVD+L L ++ T SP
Sbjct: 191 MHSSTVPATPTTPGANLFTQSMVDMLKLNAQNAAHSTGSP 230
>U13645-5|AAM15541.1| 425|Caenorhabditis elegans Hypothetical
protein C05D10.1b protein.
Length = 425
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -1
Query: 738 LNTYSVRYTPTHIGRQPVTKSMVDILSLLGSSSLACTNSP 619
+++ +V TPT G T+SMVD+L L ++ T SP
Sbjct: 159 MHSSTVPATPTTPGANLFTQSMVDMLKLNAQNAAHSTGSP 198
>U13645-4|AAA20986.2| 529|Caenorhabditis elegans Hypothetical
protein C05D10.1a protein.
Length = 529
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -1
Query: 738 LNTYSVRYTPTHIGRQPVTKSMVDILSLLGSSSLACTNSP 619
+++ +V TPT G T+SMVD+L L ++ T SP
Sbjct: 263 MHSSTVPATPTTPGANLFTQSMVDMLKLNAQNAAHSTGSP 302
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,671,768
Number of Sequences: 27780
Number of extensions: 432645
Number of successful extensions: 1177
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1177
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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