Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_A09
(862 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74046-1|CAA98556.2| 178|Caenorhabditis elegans Hypothetical pr... 37 0.021
Z75711-5|CAB00036.1| 423|Caenorhabditis elegans Hypothetical pr... 33 0.26
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 33 0.26
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 33 0.26
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 33 0.26
U64847-4|AAB04873.1| 492|Caenorhabditis elegans Cytochrome p450... 32 0.60
AF016442-8|AAB65916.1| 881|Caenorhabditis elegans Hypothetical ... 32 0.60
AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical ... 30 2.4
AF016448-14|AAB65960.2| 304|Caenorhabditis elegans Hypothetical... 29 3.2
AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical ... 29 3.2
Z80215-4|CAB02272.1| 189|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z72517-5|CAA96693.1| 545|Caenorhabditis elegans Hypothetical pr... 29 4.3
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 29 4.3
U58735-4|AAC48144.1| 479|Caenorhabditis elegans Hypothetical pr... 29 4.3
U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily ass... 29 4.3
U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily ass... 29 4.3
U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily ass... 29 4.3
AF026212-4|AAF99973.2| 386|Caenorhabditis elegans Hypothetical ... 29 4.3
Z73971-1|CAA98249.2| 929|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical p... 28 7.4
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 28 7.4
AF224743-1|AAF82248.1| 929|Caenorhabditis elegans leucine-rich ... 28 7.4
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 28 9.8
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 28 9.8
U46674-5|AAA85757.1| 708|Caenorhabditis elegans Hypothetical pr... 28 9.8
U40938-2|AAQ65206.1| 463|Caenorhabditis elegans Hypothetical pr... 28 9.8
U40938-1|AAA81695.2| 465|Caenorhabditis elegans Hypothetical pr... 28 9.8
AL021469-3|CAA16290.2| 435|Caenorhabditis elegans Hypothetical ... 28 9.8
>Z74046-1|CAA98556.2| 178|Caenorhabditis elegans Hypothetical
protein ZC116.1 protein.
Length = 178
Score = 36.7 bits (81), Expect = 0.021
Identities = 27/97 (27%), Positives = 41/97 (42%)
Frame = +1
Query: 97 LVLCGLLAAVSAAPQYYHGSSHWPYHHYDPVQSLRSGKHVGHTFALVQPCQRNATLGRHD 276
L LC LLA SA YY S + PY++Y P + V T + Q Q G
Sbjct: 5 LALCSLLAVASAQYLYYPTSYYTPYYYYYPTAA------VAGTTGVAQQTQAG---GASQ 55
Query: 277 EGAVVEVPQHYKRRTRGRRQVSDIYSPAWLRTERHQR 387
+ + PQ ++ +G +Q Y P + + Q+
Sbjct: 56 QAYAQQQPQQNQQYAQGTQQQQQQYYPQQTQQGQQQQ 92
>Z75711-5|CAB00036.1| 423|Caenorhabditis elegans Hypothetical
protein K02B12.7 protein.
Length = 423
Score = 33.1 bits (72), Expect = 0.26
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +2
Query: 419 ANSAFNHYLKIQNLPWDVNSEGSWVYEKDVLKITFPLK-QKQPEDSKRPVAEPTETTPTN 595
+ + FN +LK NLP +EG + LK T P++ +K+ E S +PV + T N
Sbjct: 310 SQNEFNDWLKQSNLPRG-TTEGGDHLSNEELKPTEPVETKKKKERSVKPVQSKEKVTAEN 368
Query: 596 VSREEMEFTTESNVRDVDVGLETAQKTNEIAKA 694
V ++ T + TA + +A A
Sbjct: 369 VEDDDSSSTITQFESSFNKPKTTAPRLAPVAAA 401
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 33.1 bits (72), Expect = 0.26
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +2
Query: 476 SEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTPTNVSREEM-EFTTESNVRDVDV 652
+E S + DV KI PL+Q Q + VA P+E T +V +E ++++V V
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKEAAPSEPSQADVPKVAA 3426
Query: 653 GLETAQKTNEI 685
LE Q E+
Sbjct: 3427 PLEQTQIQQEV 3437
Score = 32.3 bits (70), Expect = 0.46
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 497 EKDVLKITFPLKQKQPEDSKRPVAEPTETTPTNVSREEM-EFTTESNVRDVDVGLETAQK 673
+ DV K+ PL+Q Q + VA P+E T +V +E ++++V V LE Q
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKEAAPSEPSQADVPKVAAPLEQTQI 3507
Query: 674 TNEI 685
E+
Sbjct: 3508 QQEV 3511
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 33.1 bits (72), Expect = 0.26
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +2
Query: 476 SEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTPTNVSREEM-EFTTESNVRDVDV 652
+E S + DV KI PL+Q Q + VA P+E T +V +E ++++V V
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKEAAPSEPSQADVPKVAA 3426
Query: 653 GLETAQKTNEI 685
LE Q E+
Sbjct: 3427 PLEQTQIQQEV 3437
Score = 32.3 bits (70), Expect = 0.46
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 497 EKDVLKITFPLKQKQPEDSKRPVAEPTETTPTNVSREEM-EFTTESNVRDVDVGLETAQK 673
+ DV K+ PL+Q Q + VA P+E T +V +E ++++V V LE Q
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKEAAPSEPSQADVPKVAAPLEQTQI 3507
Query: 674 TNEI 685
E+
Sbjct: 3508 QQEV 3511
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 33.1 bits (72), Expect = 0.26
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +2
Query: 476 SEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTPTNVSREEM-EFTTESNVRDVDV 652
+E S + DV KI PL+Q Q + VA P+E T +V +E ++++V V
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKEAAPSEPSQADVPKVAA 3426
Query: 653 GLETAQKTNEI 685
LE Q E+
Sbjct: 3427 PLEQTQIQQEV 3437
Score = 32.3 bits (70), Expect = 0.46
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 497 EKDVLKITFPLKQKQPEDSKRPVAEPTETTPTNVSREEM-EFTTESNVRDVDVGLETAQK 673
+ DV K+ PL+Q Q + VA P+E T +V +E ++++V V LE Q
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKEAAPSEPSQADVPKVAAPLEQTQI 3507
Query: 674 TNEI 685
E+
Sbjct: 3508 QQEV 3511
>U64847-4|AAB04873.1| 492|Caenorhabditis elegans Cytochrome p450
family protein 14A5 protein.
Length = 492
Score = 31.9 bits (69), Expect = 0.60
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -3
Query: 539 AFASAGR*FSTRLSRKPSCLRNSHPREGSVFSSND 435
AF + G F R R P L HP G VFSS D
Sbjct: 82 AFVTQGDAFVNRAQRLPEILFQPHPNTGVVFSSGD 116
>AF016442-8|AAB65916.1| 881|Caenorhabditis elegans Hypothetical
protein K12B6.1 protein.
Length = 881
Score = 31.9 bits (69), Expect = 0.60
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Frame = -2
Query: 678 LVFWAVSKPTSTSRTLLSVVNSISSRLTFVGVVSVG---SATGLLLSSGCFCFSG--KVI 514
L+ A +KP + +VVNSI G++SVG S TGL+L FSG KV
Sbjct: 407 LIKLAAAKPHDRKKITDTVVNSIGLASEPKGIISVGAPESVTGLVLPKPDIYFSGGKKVF 466
Query: 513 FN 508
+N
Sbjct: 467 WN 468
>AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical
protein R193.2 protein.
Length = 1853
Score = 29.9 bits (64), Expect = 2.4
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = -2
Query: 765 SN*YGIGKNSASSLMLTAYVVASTAFAISLVFWAVSKPTSTSRTLLSVVNSISSR--LTF 592
SN Y NS S LT + A T + F+A T+ T SV+N++SS+ LT
Sbjct: 75 SNAYTSPTNSFGSAPLTTQINAFTQNPNGVNFYAELIFPDTTATPASVINALSSQGYLTN 134
Query: 591 VGVVSVGSATGLL 553
V S +GL+
Sbjct: 135 AFVSSTSQCSGLI 147
>AF016448-14|AAB65960.2| 304|Caenorhabditis elegans Hypothetical
protein F41E6.12 protein.
Length = 304
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 524 PLKQKQPEDSKRPVAEPTETTPTNVSREEMEFTTES 631
P+ P + AEPT TTP S + ++F ES
Sbjct: 64 PMTTLPPSTTTSTTAEPTTTTPLKSSTDSVDFDEES 99
>AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical
protein R155.3 protein.
Length = 1165
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +2
Query: 485 SWVY--EKD-VLKITFPLKQKQPEDSKRPVAEPTETTPTNVSREEMEFTTESNVRDV 646
SW Y +KD + F +++ E+ K+PV + + N E+E T + +++DV
Sbjct: 686 SWFYLHQKDPAARKCFAIRELPMEEVKKPVKKKDVSKMDNKPERELEKTQDESIKDV 742
>Z80215-4|CAB02272.1| 189|Caenorhabditis elegans Hypothetical
protein C36B1.7 protein.
Length = 189
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 10/54 (18%)
Frame = +3
Query: 96 LSVVRTAGGGLGRATVLPW----------LVTLAVSPLRPRSVLTFGKACWTHI 227
L V A GG+G+ VLPW VT VS R+ + G+ CW I
Sbjct: 6 LIVAMDAEGGIGKNGVLPWRIKKDMQYFASVTKNVSDQSKRNAVLMGRKCWESI 59
>Z72517-5|CAA96693.1| 545|Caenorhabditis elegans Hypothetical
protein T28F4.2 protein.
Length = 545
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = -2
Query: 636 TLLSVVNSISSRLTF---VGVVSVGSATGLLLSSGCFCFSGKVI 514
T+ +V+N + + + V+SV TGL+L G FC +G I
Sbjct: 445 TVSNVINDLGGQAGLWLGLSVISVVEMTGLMLVMGAFCVTGGAI 488
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter than
wild-typeprotein 6 protein.
Length = 1254
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 548 DSKRPVAEPTETTPTNVSREEMEFTTESNVRDVDVGLETAQKTNE 682
D +P E PTN +EMEF E +R+ + +E A++ E
Sbjct: 1073 DEAQPTDEIRRAQPTNEMDKEMEF--EKRIREQRIQMEQAKRLRE 1115
>U58735-4|AAC48144.1| 479|Caenorhabditis elegans Hypothetical
protein F20B4.3 protein.
Length = 479
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 563 VAEPTETTPTNVSREEMEFTTESNVRDVDVGLETAQKT 676
++ PT +P N+ R F+T + +RD DV + Q T
Sbjct: 28 LSHPTRDSPINMYRTASPFSTVTRIRDSDVDRWSHQST 65
>U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform d protein.
Length = 799
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 503 DVLKITFPLKQKQPEDSKRPVAEPTETTPTNVSR 604
D +K++ P+ P+ + PVAEP +PT ++
Sbjct: 503 DYVKVSEPIYDYPPKGHEAPVAEPKRISPTEAAQ 536
>U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform a protein.
Length = 1091
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 503 DVLKITFPLKQKQPEDSKRPVAEPTETTPTNVSR 604
D +K++ P+ P+ + PVAEP +PT ++
Sbjct: 503 DYVKVSEPIYDYPPKGHEAPVAEPKRISPTEAAQ 536
>U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform b protein.
Length = 1107
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 503 DVLKITFPLKQKQPEDSKRPVAEPTETTPTNVSR 604
D +K++ P+ P+ + PVAEP +PT ++
Sbjct: 503 DYVKVSEPIYDYPPKGHEAPVAEPKRISPTEAAQ 536
>AF026212-4|AAF99973.2| 386|Caenorhabditis elegans Hypothetical
protein F52G3.5 protein.
Length = 386
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = +2
Query: 530 KQKQPEDSKRPVAEPTETTPTNVSREEMEFTTESNVRDVDVGLETAQKTNE 682
+ K+P+ +K T T + EE TTE +V D++ ++ E
Sbjct: 215 RSKRPKTTKTTTTSTTTTEAPTTTTEEYTTTTEEDVTDLETQAPNVEEVTE 265
>Z73971-1|CAA98249.2| 929|Caenorhabditis elegans Hypothetical protein
C50H2.1 protein.
Length = 929
Score = 28.3 bits (60), Expect = 7.4
Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 3/113 (2%)
Frame = +1
Query: 64 RVVERSTRMIALVLCGLLAAVSAAPQYYHGSSHWPYHHYDPVQSLRSGKHVGHT-FALVQ 240
RV ++ +I + G L A S+ +YH + + SG H+ T +
Sbjct: 701 RVRSKTLPVIRRITTGPLNAASSLSNFYHSQPPGAHRRSRDEPTSPSGMHLAVTQTTSLN 760
Query: 241 PCQRNATLGRHDEGAVVEVPQHYKRRTRGRRQVS-DI-YSPAWLRTERHQRES 393
R + + R +G + + Y RR +VS DI SP R++R R S
Sbjct: 761 STPRGSDVSRASDGMLFD----YDRRASASPRVSFDIPISPTTPRSDRKNRIS 809
>Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5i protein.
Length = 1030
Score = 28.3 bits (60), Expect = 7.4
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Frame = +2
Query: 530 KQKQPEDSKRPVAEPTETTPTNV------SREEMEFTT--ESNVRDVDVGLETAQKTNEI 685
K K+ +S++ V EP + PT+ S + ++F T E V +V E ++ ++
Sbjct: 495 KDKKKSESEKAVEEPVQAAPTSKKPTADDSMDFLDFVTAKEERVEEVAPVQEQVKEQKKV 554
Query: 686 AKAVEATTYAVNIRDDAEFL 745
K V + D+ +FL
Sbjct: 555 EKPVAPVSKKPTADDNMDFL 574
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 527 LKQKQPEDSKRPVAEPTETTPTNVSRE 607
LK+K+P S +PV++P+ T V +E
Sbjct: 239 LKKKEPSTSVKPVSDPSPTKKVPVKKE 265
>AF224743-1|AAF82248.1| 929|Caenorhabditis elegans leucine-rich
repeat-containingG protein-coupled receptor protein.
Length = 929
Score = 28.3 bits (60), Expect = 7.4
Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 3/113 (2%)
Frame = +1
Query: 64 RVVERSTRMIALVLCGLLAAVSAAPQYYHGSSHWPYHHYDPVQSLRSGKHVGHT-FALVQ 240
RV ++ +I + G L A S+ +YH + + SG H+ T +
Sbjct: 701 RVRSKTLPVIRRITTGPLNAASSLSNFYHSQPPGAHRRSRDEPTSPSGMHLAVTQTTSLN 760
Query: 241 PCQRNATLGRHDEGAVVEVPQHYKRRTRGRRQVS-DI-YSPAWLRTERHQRES 393
R + + R +G + + Y RR +VS DI SP R++R R S
Sbjct: 761 STPRGSDVSRASDGMLFD----YDRRASASPRVSFDIPISPTTPRSDRKNRIS 809
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
F53B7.5b protein.
Length = 2892
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -3
Query: 296 TSTTAPSSCRPSVAFRWQGW-TKANVCPTCFPERK 195
TST A S C S WQ W T C +C +++
Sbjct: 2804 TSTAAASDCSTSTWNAWQEWSTCTETCGSCGTQQR 2838
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
F53B7.5a protein.
Length = 3095
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -3
Query: 296 TSTTAPSSCRPSVAFRWQGW-TKANVCPTCFPERK 195
TST A S C S WQ W T C +C +++
Sbjct: 2804 TSTAAASDCSTSTWNAWQEWSTCTETCGSCGTQQR 2838
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -3
Query: 296 TSTTAPSSCRPSVAFRWQGW-TKANVCPTCFPERK 195
TST A S C S WQ W T C +C +++
Sbjct: 2804 TSTAAASDCSTSTWNAWQEWSTCTETCGSCGTQQR 2838
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -3
Query: 296 TSTTAPSSCRPSVAFRWQGW-TKANVCPTCFPERK 195
TST A S C S WQ W T C +C +++
Sbjct: 2804 TSTAAASDCSTSTWNAWQEWSTCTETCGSCGTQQR 2838
>U46674-5|AAA85757.1| 708|Caenorhabditis elegans Hypothetical
protein T26A8.1 protein.
Length = 708
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = +2
Query: 575 TETTPTNVSREEMEFTTESNVRDVDVGL-ETAQKTNEI---AKAVEATTYAVNIRDDAEF 742
TET T V + TT +DV ++ + TN + + A+E Y N +D+ F
Sbjct: 352 TETPSTTVITTTIPSTTSEPEATIDVKTRDSKEDTNGVLPTSSAIETPPYPENCPEDSLF 411
Query: 743 LP 748
LP
Sbjct: 412 LP 413
>U40938-2|AAQ65206.1| 463|Caenorhabditis elegans Hypothetical
protein D1009.3b protein.
Length = 463
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 569 EPTETTPTNVSREEMEF-TTESNVRDVDVGLETAQKTNEIAKAVEATT 709
E T T T S+ ++ TTE V + + LE A + +EIA +EATT
Sbjct: 132 EDTTTITTTTSQTPDDYDTTEPFVEEEEYHLEEATEHHEIA-TIEATT 178
>U40938-1|AAA81695.2| 465|Caenorhabditis elegans Hypothetical
protein D1009.3a protein.
Length = 465
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 569 EPTETTPTNVSREEMEF-TTESNVRDVDVGLETAQKTNEIAKAVEATT 709
E T T T S+ ++ TTE V + + LE A + +EIA +EATT
Sbjct: 134 EDTTTITTTTSQTPDDYDTTEPFVEEEEYHLEEATEHHEIA-TIEATT 180
>AL021469-3|CAA16290.2| 435|Caenorhabditis elegans Hypothetical
protein Y116A8B.5 protein.
Length = 435
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = -2
Query: 666 AVSKPTSTSRTLLSVVNSISSRLTFVGVVSVGSATGLLL 550
AVS TSRT L +V +IS + F+ + +VG+ T +L+
Sbjct: 15 AVSNEDDTSRTTLKLVLAISYLVLFI-IGTVGNGTVILM 52
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,544,890
Number of Sequences: 27780
Number of extensions: 397623
Number of successful extensions: 1305
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1305
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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