Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_P24
(1037 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 41 0.001
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 38 0.012
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 38 0.012
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 38 0.012
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 38 0.012
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 37 0.021
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 35 0.11
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 35 0.11
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 29 5.4
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 29 5.4
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 41.1 bits (92), Expect = 0.001
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 328 MGTVFSYQVXGXXTDVSVSTRNGRVEMXDKXKGKSSTPSYMTXTQD-GERXXGDAXRXXX 504
MGT+ + + V V +NGRVE+ +G TPSY+ + D GER GDA +
Sbjct: 29 MGTIIGIDLGTTYSCVGVF-KNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQL 87
Query: 505 XTNP 516
NP
Sbjct: 88 TINP 91
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 37.9 bits (84), Expect = 0.012
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +1
Query: 388 RNGRVEMXDKXKGKSSTPSYMTXTQDGERXXGDAXRXXXXTNPXKHCGXDAK 543
+NG+VE+ +G +TPSY+ T D ER GDA + NP ++ DAK
Sbjct: 22 QNGKVEILANSEGNKTTPSYVAFT-DTERLVGDAAKDQAARNP-ENTVFDAK 71
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 37.9 bits (84), Expect = 0.012
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +1
Query: 388 RNGRVEMXDKXKGKSSTPSYMTXTQDGERXXGDAXRXXXXTNPXKHCGXDAK 543
+NG+VE+ +G +TPSY+ T D ER GDA + NP ++ DAK
Sbjct: 22 QNGKVEILANSEGNKTTPSYVAFT-DTERLVGDAAKDQAARNP-ENTVFDAK 71
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 37.9 bits (84), Expect = 0.012
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +1
Query: 388 RNGRVEMXDKXKGKSSTPSYMTXTQDGERXXGDAXRXXXXTNPXKHCGXDAK 543
+NG+VE+ +G +TPSY+ T D ER GDA + NP ++ DAK
Sbjct: 22 QNGKVEILANSEGNKTTPSYVAFT-DTERLVGDAAKDQAARNP-ENTVFDAK 71
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 37.9 bits (84), Expect = 0.012
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 331 GTVFSYQVXGXXTDVSVSTRNGRVEMXDKXKGKSSTPSYMTXTQD-GERXXGDAXRXXXX 507
GT+ + + V V +NGRVE+ +G TPSY+ + D G+R GDA +
Sbjct: 33 GTIIGIDLGTTYSCVGVY-KNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLT 91
Query: 508 TNP 516
NP
Sbjct: 92 INP 94
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 37.1 bits (82), Expect = 0.021
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +1
Query: 388 RNGRVEMXDKXKGKSSTPSYMTXTQD-GERXXGDAXRXXXXTNP 516
+NGRVE+ +G TPSY+ + D G+R GDA + NP
Sbjct: 51 KNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINP 94
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 34.7 bits (76), Expect = 0.11
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 391 NGRVEMXDKXKGKSSTPSYMTXTQDGERXXGDAXRXXXXTNP 516
+G+VE+ +G +TPSY+ T D ER GDA + NP
Sbjct: 23 HGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNP 63
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 34.7 bits (76), Expect = 0.11
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 391 NGRVEMXDKXKGKSSTPSYMTXTQDGERXXGDAXRXXXXTNP 516
+G+VE+ +G +TPSY+ T D ER GDA + NP
Sbjct: 23 HGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNP 63
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 29.1 bits (62), Expect = 5.4
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 367 TDVSVSTRNGRV-EMXDKXKGKSSTPSYMTXTQDGERXXGDAXRXXXXTN 513
T+ VS G+ ++ + +G +TPS + T DGER G + TN
Sbjct: 41 TNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVTN 90
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 29.1 bits (62), Expect = 5.4
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 367 TDVSVSTRNGRV-EMXDKXKGKSSTPSYMTXTQDGERXXGDAXRXXXXTN 513
T+ VS G+ ++ + +G +TPS + T DGER G + TN
Sbjct: 41 TNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVTN 90
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,806,038
Number of Sequences: 27780
Number of extensions: 97767
Number of successful extensions: 151
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 149
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2751568594
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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